RNA–Protein interactions for RNA: ENST00000518081.1

EFCAB13-204, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-204ENST00000518081 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
EFCAB13-204ENST00000518081 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
EFCAB13-204ENST00000518081 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
EFCAB13-204ENST00000518081 PSDA5PKW4 1024 aaPredicted RBP13.8□□□□□ -0.2
EFCAB13-204ENST00000518081 MAP2K5Q13163 448 aa13.8□□□□□ -0.2
EFCAB13-204ENST00000518081 IRF6O14896 467 aa13.79□□□□□ -0.2
EFCAB13-204ENST00000518081 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
EFCAB13-204ENST00000518081 PPP4R3BQ5MIZ7 849 aa13.79□□□□□ -0.2
EFCAB13-204ENST00000518081 TRIM66O15016 1216 aa13.77□□□□□ -0.21
EFCAB13-204ENST00000518081 CCDC102AQ96A19 550 aa13.75□□□□□ -0.21
EFCAB13-204ENST00000518081 ST18O60284 1047 aa13.74□□□□□ -0.21
EFCAB13-204ENST00000518081 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
EFCAB13-204ENST00000518081 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
EFCAB13-204ENST00000518081 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
EFCAB13-204ENST00000518081 COL9A1P20849 921 aa13.69□□□□□ -0.22
EFCAB13-204ENST00000518081 PDE4DQ08499 809 aa13.69□□□□□ -0.22
EFCAB13-204ENST00000518081 PTPREP23469 700 aa13.68□□□□□ -0.22
EFCAB13-204ENST00000518081 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
EFCAB13-204ENST00000518081 ERBB3P21860 1342 aa13.67□□□□□ -0.22
EFCAB13-204ENST00000518081 PRSS12P56730 875 aa13.67□□□□□ -0.22
EFCAB13-204ENST00000518081 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
EFCAB13-204ENST00000518081 TTC13Q8NBP0 860 aa13.66□□□□□ -0.22
EFCAB13-204ENST00000518081 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
EFCAB13-204ENST00000518081 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
EFCAB13-204ENST00000518081 GPBP1L1Q9HC44 474 aaPredicted RBP13.65□□□□□ -0.22
EFCAB13-204ENST00000518081 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
EFCAB13-204ENST00000518081 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
EFCAB13-204ENST00000518081 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
EFCAB13-204ENST00000518081 EMP3P54852 163 aa13.63□□□□□ -0.23
EFCAB13-204ENST00000518081 AMHR2Q16671 573 aa13.63□□□□□ -0.23
EFCAB13-204ENST00000518081 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
EFCAB13-204ENST00000518081 KCNK17Q96T54 332 aa13.61□□□□□ -0.23
EFCAB13-204ENST00000518081 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
EFCAB13-204ENST00000518081 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
EFCAB13-204ENST00000518081 KDM4CQ9H3R0 1056 aa13.6□□□□□ -0.23
EFCAB13-204ENST00000518081 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
EFCAB13-204ENST00000518081 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
EFCAB13-204ENST00000518081 OATP04181 439 aa13.58□□□□□ -0.24
EFCAB13-204ENST00000518081 PHOX2BQ99453 314 aa13.58□□□□□ -0.24
EFCAB13-204ENST00000518081 TSKSQ9UJT2 592 aa13.58□□□□□ -0.24
EFCAB13-204ENST00000518081 PSEN2P49810 448 aa13.57□□□□□ -0.24
EFCAB13-204ENST00000518081 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
EFCAB13-204ENST00000518081 PARP9Q8IXQ6 854 aa13.57□□□□□ -0.24
EFCAB13-204ENST00000518081 METTL3Q86U44 580 aaKnown RBP13.56□□□□□ -0.24
EFCAB13-204ENST00000518081 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
EFCAB13-204ENST00000518081 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
EFCAB13-204ENST00000518081 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
EFCAB13-204ENST00000518081 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
EFCAB13-204ENST00000518081 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
EFCAB13-204ENST00000518081 PROX2Q3B8N5 592 aa13.54□□□□□ -0.24
EFCAB13-204ENST00000518081 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
EFCAB13-204ENST00000518081 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
EFCAB13-204ENST00000518081 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
EFCAB13-204ENST00000518081 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
EFCAB13-204ENST00000518081 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
EFCAB13-204ENST00000518081 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
EFCAB13-204ENST00000518081 C3orf80F5H4A9 247 aa13.52□□□□□ -0.25
EFCAB13-204ENST00000518081 ZBED2Q9BTP6 218 aa13.52□□□□□ -0.25
EFCAB13-204ENST00000518081 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
EFCAB13-204ENST00000518081 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
EFCAB13-204ENST00000518081 HS3ST6Q96QI5 342 aa13.51□□□□□ -0.25
EFCAB13-204ENST00000518081 TMUB1Q9BVT8 246 aa13.51□□□□□ -0.25
EFCAB13-204ENST00000518081 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
EFCAB13-204ENST00000518081 PACS2Q86VP3 889 aa13.5□□□□□ -0.25
EFCAB13-204ENST00000518081 NLRP7Q8WX94 980 aa13.5□□□□□ -0.25
EFCAB13-204ENST00000518081 EYA1Q99502 592 aa13.5□□□□□ -0.25
EFCAB13-204ENST00000518081 CLCN1P35523 988 aa13.49□□□□□ -0.25
EFCAB13-204ENST00000518081 PBX2P40425 430 aa13.49□□□□□ -0.25
EFCAB13-204ENST00000518081 DMRTA1Q5VZB9 504 aa13.49□□□□□ -0.25
EFCAB13-204ENST00000518081 NUDT18Q6ZVK8 323 aa13.49□□□□□ -0.25
EFCAB13-204ENST00000518081 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
EFCAB13-204ENST00000518081 GIGYF2Q6Y7W6 1299 aaKnown RBP13.48□□□□□ -0.25
EFCAB13-204ENST00000518081 TATDN2Q93075 761 aa13.48□□□□□ -0.25
EFCAB13-204ENST00000518081 FAM117AQ9C073 453 aa13.47□□□□□ -0.25
EFCAB13-204ENST00000518081 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
EFCAB13-204ENST00000518081 KIAA1468Q9P260 1216 aa13.47□□□□□ -0.25
EFCAB13-204ENST00000518081 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
EFCAB13-204ENST00000518081 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
EFCAB13-204ENST00000518081 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
EFCAB13-204ENST00000518081 RCCD1A6NED2 376 aa13.44□□□□□ -0.26
EFCAB13-204ENST00000518081 SMAPO00193 183 aa13.44□□□□□ -0.26
EFCAB13-204ENST00000518081 MS4A1P11836 297 aa13.44□□□□□ -0.26
EFCAB13-204ENST00000518081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
EFCAB13-204ENST00000518081 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
EFCAB13-204ENST00000518081 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
EFCAB13-204ENST00000518081 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
EFCAB13-204ENST00000518081 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
EFCAB13-204ENST00000518081 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
EFCAB13-204ENST00000518081 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
EFCAB13-204ENST00000518081 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
EFCAB13-204ENST00000518081 DNAJB2P25686 324 aa13.38□□□□□ -0.27
EFCAB13-204ENST00000518081 TMEM134Q9H6X4 195 aa13.35□□□□□ -0.27
EFCAB13-204ENST00000518081 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
EFCAB13-204ENST00000518081 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
EFCAB13-204ENST00000518081 TK2O00142 265 aa13.33□□□□□ -0.28
EFCAB13-204ENST00000518081 LSM11P83369 360 aaKnown RBP eCLIP13.33□□□□□ -0.28
EFCAB13-204ENST00000518081 BHMG1C9JSJ3 638 aaPredicted RBP13.32□□□□□ -0.28
EFCAB13-204ENST00000518081 BEGAINQ9BUH8 593 aa13.32□□□□□ -0.28
EFCAB13-204ENST00000518081 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-204ENST00000518081 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms