RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
PCM1-205ENST00000517836 DDX12PQ92771 950 aa10.76□□□□□ -0.69
PCM1-205ENST00000517836 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
PCM1-205ENST00000517836 COL9A1P20849 921 aa10.75□□□□□ -0.69
PCM1-205ENST00000517836 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
PCM1-205ENST00000517836 PHF14O94880 888 aa10.74□□□□□ -0.69
PCM1-205ENST00000517836 TYW1BQ6NUM6 668 aa10.74□□□□□ -0.69
PCM1-205ENST00000517836 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
PCM1-205ENST00000517836 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
PCM1-205ENST00000517836 STAC3Q96MF2 364 aa10.73□□□□□ -0.69
PCM1-205ENST00000517836 PRKCSHP14314 528 aaPredicted RBP10.71□□□□□ -0.69
PCM1-205ENST00000517836 PROX2Q3B8N5 592 aa10.71□□□□□ -0.69
PCM1-205ENST00000517836 SLC4A5Q9BY07 1137 aa10.71□□□□□ -0.69
PCM1-205ENST00000517836 ARIH1Q9Y4X5 557 aaPredicted RBP10.71□□□□□ -0.69
PCM1-205ENST00000517836 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
PCM1-205ENST00000517836 FBXW7Q969H0 707 aa10.69□□□□□ -0.7
PCM1-205ENST00000517836 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
PCM1-205ENST00000517836 PDIA6Q15084 440 aa10.68□□□□□ -0.7
PCM1-205ENST00000517836 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
PCM1-205ENST00000517836 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
PCM1-205ENST00000517836 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
PCM1-205ENST00000517836 EPAS1Q99814 870 aa10.66□□□□□ -0.7
PCM1-205ENST00000517836 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
PCM1-205ENST00000517836 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
PCM1-205ENST00000517836 PTPN5P54829 565 aa10.64□□□□□ -0.71
PCM1-205ENST00000517836 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
PCM1-205ENST00000517836 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
PCM1-205ENST00000517836 SPDYE16A6NNV3 312 aaPredicted RBP10.63□□□□□ -0.71
PCM1-205ENST00000517836 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
PCM1-205ENST00000517836 MAP3K7O43318 606 aa10.61□□□□□ -0.71
PCM1-205ENST00000517836 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
PCM1-205ENST00000517836 GOLGA8CPA6NN73 597 aa10.6□□□□□ -0.71
PCM1-205ENST00000517836 EN1Q05925 392 aaPredicted RBP10.6□□□□□ -0.71
PCM1-205ENST00000517836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
PCM1-205ENST00000517836 WNT2BQ93097 391 aa10.6□□□□□ -0.71
PCM1-205ENST00000517836 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
PCM1-205ENST00000517836 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
PCM1-205ENST00000517836 SEMA3EO15041 775 aa10.59□□□□□ -0.71
PCM1-205ENST00000517836 SMYD5Q6GMV2 418 aa10.59□□□□□ -0.71
PCM1-205ENST00000517836 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
PCM1-205ENST00000517836 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
PCM1-205ENST00000517836 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
PCM1-205ENST00000517836 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
PCM1-205ENST00000517836 TRIM6-TRIM34B2RNG4 842 aa10.55□□□□□ -0.72
PCM1-205ENST00000517836 OSBPP22059 807 aa10.54□□□□□ -0.72
PCM1-205ENST00000517836 CDHR5Q9HBB8 845 aa10.54□□□□□ -0.72
PCM1-205ENST00000517836 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
PCM1-205ENST00000517836 BCAMP50895 628 aa10.52□□□□□ -0.73
PCM1-205ENST00000517836 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
PCM1-205ENST00000517836 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
PCM1-205ENST00000517836 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
PCM1-205ENST00000517836 ZFRQ96KR1 1074 aaKnown RBP10.5□□□□□ -0.73
PCM1-205ENST00000517836 SMAPO00193 183 aa10.49□□□□□ -0.73
PCM1-205ENST00000517836 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
PCM1-205ENST00000517836 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
PCM1-205ENST00000517836 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
PCM1-205ENST00000517836 LAPTM4BQ86VI4 370 aa10.48□□□□□ -0.73
PCM1-205ENST00000517836 PRSS12P56730 875 aa10.47□□□□□ -0.73
PCM1-205ENST00000517836 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
PCM1-205ENST00000517836 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
PCM1-205ENST00000517836 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
PCM1-205ENST00000517836 ZC3H15Q8WU90 426 aaKnown RBP10.44□□□□□ -0.74
PCM1-205ENST00000517836 NPDC1Q9NQX5 325 aaPredicted RBP10.44□□□□□ -0.74
PCM1-205ENST00000517836 WBP1LQ9NX94 342 aa10.44□□□□□ -0.74
PCM1-205ENST00000517836 CERKQ8TCT0 537 aa10.4□□□□□ -0.74
PCM1-205ENST00000517836 TATDN2Q93075 761 aa10.4□□□□□ -0.74
PCM1-205ENST00000517836 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.4□□□□□ -0.74
PCM1-205ENST00000517836 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
PCM1-205ENST00000517836 PADI6Q6TGC4 694 aa10.39□□□□□ -0.75
PCM1-205ENST00000517836 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
PCM1-205ENST00000517836 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
PCM1-205ENST00000517836 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
PCM1-205ENST00000517836 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
PCM1-205ENST00000517836 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
PCM1-205ENST00000517836 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
PCM1-205ENST00000517836 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
PCM1-205ENST00000517836 ZMYND10O75800 440 aa10.35□□□□□ -0.75
PCM1-205ENST00000517836 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
PCM1-205ENST00000517836 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
PCM1-205ENST00000517836 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
PCM1-205ENST00000517836 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
PCM1-205ENST00000517836 RGS20O76081 388 aa10.31□□□□□ -0.76
PCM1-205ENST00000517836 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
PCM1-205ENST00000517836 PPP4CP60510 307 aa10.3□□□□□ -0.76
PCM1-205ENST00000517836 PTGDRQ13258 359 aa10.3□□□□□ -0.76
PCM1-205ENST00000517836 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
PCM1-205ENST00000517836 RNF40O75150 1001 aa10.29□□□□□ -0.76
PCM1-205ENST00000517836 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
PCM1-205ENST00000517836 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
PCM1-205ENST00000517836 SLC24A3Q9HC58 644 aa10.28□□□□□ -0.76
PCM1-205ENST00000517836 A0A0G2JS52 829 aa10.27□□□□□ -0.77
PCM1-205ENST00000517836 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
PCM1-205ENST00000517836 NYAP1Q6ZVC0 841 aa10.27□□□□□ -0.77
PCM1-205ENST00000517836 EYA1Q99502 592 aa10.27□□□□□ -0.77
PCM1-205ENST00000517836 GPR37O15354 613 aa10.24□□□□□ -0.77
PCM1-205ENST00000517836 KCNC4Q03721 635 aa10.24□□□□□ -0.77
PCM1-205ENST00000517836 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
PCM1-205ENST00000517836 FCHSD2O94868 740 aa10.23□□□□□ -0.77
PCM1-205ENST00000517836 HDGFP51858 240 aaKnown RBP10.23□□□□□ -0.77
PCM1-205ENST00000517836 APLP1P51693 650 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms