RNA–Protein interactions for RNA: ENST00000517813.1

DENND3-203, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 4,487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-203ENST00000517813 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
DENND3-203ENST00000517813 CENPJQ9HC77 1338 aaPredicted RBP16.73■□□□□ 0.27
DENND3-203ENST00000517813 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
DENND3-203ENST00000517813 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
DENND3-203ENST00000517813 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
DENND3-203ENST00000517813 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
DENND3-203ENST00000517813 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
DENND3-203ENST00000517813 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
DENND3-203ENST00000517813 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.26
DENND3-203ENST00000517813 APAF1O14727 1248 aa16.7■□□□□ 0.26
DENND3-203ENST00000517813 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
DENND3-203ENST00000517813 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
DENND3-203ENST00000517813 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
DENND3-203ENST00000517813 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
DENND3-203ENST00000517813 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
DENND3-203ENST00000517813 PDE4AP27815 886 aa16.7■□□□□ 0.26
DENND3-203ENST00000517813 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
DENND3-203ENST00000517813 DAPK1P53355 1430 aa16.7■□□□□ 0.26
DENND3-203ENST00000517813 HECW1Q76N89 1606 aa16.69■□□□□ 0.26
DENND3-203ENST00000517813 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
DENND3-203ENST00000517813 ITPRIPQ8IWB1 547 aa16.69■□□□□ 0.26
DENND3-203ENST00000517813 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
DENND3-203ENST00000517813 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
DENND3-203ENST00000517813 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
DENND3-203ENST00000517813 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
DENND3-203ENST00000517813 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
DENND3-203ENST00000517813 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
DENND3-203ENST00000517813 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
DENND3-203ENST00000517813 TRIM44Q96DX7 344 aaPredicted RBP16.67■□□□□ 0.26
DENND3-203ENST00000517813 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
DENND3-203ENST00000517813 BRD4O60885 1362 aaPredicted RBP16.66■□□□□ 0.26
DENND3-203ENST00000517813 C9orf84Q5VXU9 1444 aa16.66■□□□□ 0.26
DENND3-203ENST00000517813 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
DENND3-203ENST00000517813 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
DENND3-203ENST00000517813 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
DENND3-203ENST00000517813 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
DENND3-203ENST00000517813 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
DENND3-203ENST00000517813 E9PSI1 815 aa16.64■□□□□ 0.26
DENND3-203ENST00000517813 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.26
DENND3-203ENST00000517813 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
DENND3-203ENST00000517813 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
DENND3-203ENST00000517813 CUL7Q14999 1698 aa16.63■□□□□ 0.25
DENND3-203ENST00000517813 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
DENND3-203ENST00000517813 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
DENND3-203ENST00000517813 VGFO15240 615 aaPredicted RBP16.62■□□□□ 0.25
DENND3-203ENST00000517813 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
DENND3-203ENST00000517813 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
DENND3-203ENST00000517813 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
DENND3-203ENST00000517813 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
DENND3-203ENST00000517813 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
DENND3-203ENST00000517813 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
DENND3-203ENST00000517813 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
DENND3-203ENST00000517813 IQGAP2Q13576 1575 aa16.61■□□□□ 0.25
DENND3-203ENST00000517813 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
DENND3-203ENST00000517813 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
DENND3-203ENST00000517813 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
DENND3-203ENST00000517813 COG6Q9Y2V7 657 aa16.6■□□□□ 0.25
DENND3-203ENST00000517813 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
DENND3-203ENST00000517813 PTPN23Q9H3S7 1636 aa16.59■□□□□ 0.25
DENND3-203ENST00000517813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
DENND3-203ENST00000517813 APBB1O00213 710 aa16.59■□□□□ 0.25
DENND3-203ENST00000517813 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
DENND3-203ENST00000517813 FAM161AQ3B820 660 aa16.58■□□□□ 0.25
DENND3-203ENST00000517813 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
DENND3-203ENST00000517813 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
DENND3-203ENST00000517813 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
DENND3-203ENST00000517813 MFAP1P55081 439 aaKnown RBP16.57■□□□□ 0.24
DENND3-203ENST00000517813 ABCC5O15440 1437 aa16.56■□□□□ 0.24
DENND3-203ENST00000517813 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
DENND3-203ENST00000517813 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
DENND3-203ENST00000517813 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
DENND3-203ENST00000517813 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
DENND3-203ENST00000517813 NGEFQ8N5V2 710 aa16.54■□□□□ 0.24
DENND3-203ENST00000517813 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
DENND3-203ENST00000517813 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
DENND3-203ENST00000517813 PTPRKQ15262 1439 aa16.52■□□□□ 0.24
DENND3-203ENST00000517813 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
DENND3-203ENST00000517813 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
DENND3-203ENST00000517813 ZKSCAN2Q63HK3 967 aa16.52■□□□□ 0.23
DENND3-203ENST00000517813 TMEM132EQ6IEE7 984 aa16.51■□□□□ 0.23
DENND3-203ENST00000517813 A0A0G2JS52 829 aa16.51■□□□□ 0.23
DENND3-203ENST00000517813 NUTM2FA1L443 756 aa16.51■□□□□ 0.23
DENND3-203ENST00000517813 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
DENND3-203ENST00000517813 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
DENND3-203ENST00000517813 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
DENND3-203ENST00000517813 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
DENND3-203ENST00000517813 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
DENND3-203ENST00000517813 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
DENND3-203ENST00000517813 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
DENND3-203ENST00000517813 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
DENND3-203ENST00000517813 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
DENND3-203ENST00000517813 GLIPR1L2Q4G1C9 344 aa16.48■□□□□ 0.23
DENND3-203ENST00000517813 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
DENND3-203ENST00000517813 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
DENND3-203ENST00000517813 PTMAP06454 111 aaKnown RBP16.47■□□□□ 0.23
DENND3-203ENST00000517813 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
DENND3-203ENST00000517813 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
DENND3-203ENST00000517813 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
DENND3-203ENST00000517813 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
DENND3-203ENST00000517813 KCNJ4P48050 445 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms