RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
FAM49B-204ENST00000517801 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
FAM49B-204ENST00000517801 HIC1Q14526 733 aa11.54□□□□□ -0.56
FAM49B-204ENST00000517801 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
FAM49B-204ENST00000517801 GNPATO15228 680 aa11.52□□□□□ -0.57
FAM49B-204ENST00000517801 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
FAM49B-204ENST00000517801 NPDC1Q9NQX5 325 aaPredicted RBP11.52□□□□□ -0.57
FAM49B-204ENST00000517801 PTPREP23469 700 aa11.5□□□□□ -0.57
FAM49B-204ENST00000517801 KRI1Q8N9T8 703 aaKnown RBP11.5□□□□□ -0.57
FAM49B-204ENST00000517801 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
FAM49B-204ENST00000517801 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
FAM49B-204ENST00000517801 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
FAM49B-204ENST00000517801 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
FAM49B-204ENST00000517801 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
FAM49B-204ENST00000517801 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
FAM49B-204ENST00000517801 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
FAM49B-204ENST00000517801 FECHP22830 423 aa11.45□□□□□ -0.58
FAM49B-204ENST00000517801 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
FAM49B-204ENST00000517801 COL9A1P20849 921 aa11.44□□□□□ -0.58
FAM49B-204ENST00000517801 AK7Q96M32 723 aa11.44□□□□□ -0.58
FAM49B-204ENST00000517801 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
FAM49B-204ENST00000517801 KCNK17Q96T54 332 aa11.44□□□□□ -0.58
FAM49B-204ENST00000517801 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
FAM49B-204ENST00000517801 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
FAM49B-204ENST00000517801 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
FAM49B-204ENST00000517801 ARHGAP33O14559 1287 aa11.41□□□□□ -0.58
FAM49B-204ENST00000517801 IRF6O14896 467 aa11.41□□□□□ -0.58
FAM49B-204ENST00000517801 PBX2P40425 430 aa11.41□□□□□ -0.58
FAM49B-204ENST00000517801 PRSS12P56730 875 aa11.41□□□□□ -0.58
FAM49B-204ENST00000517801 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
FAM49B-204ENST00000517801 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
FAM49B-204ENST00000517801 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
FAM49B-204ENST00000517801 CCDC102AQ96A19 550 aa11.4□□□□□ -0.58
FAM49B-204ENST00000517801 PSEN2P49810 448 aa11.39□□□□□ -0.59
FAM49B-204ENST00000517801 POTEEQ6S8J3 1075 aa11.39□□□□□ -0.59
FAM49B-204ENST00000517801 TTC13Q8NBP0 860 aa11.38□□□□□ -0.59
FAM49B-204ENST00000517801 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
FAM49B-204ENST00000517801 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
FAM49B-204ENST00000517801 TRIM66O15016 1216 aa11.35□□□□□ -0.59
FAM49B-204ENST00000517801 ZBED2Q9BTP6 218 aa11.35□□□□□ -0.59
FAM49B-204ENST00000517801 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
FAM49B-204ENST00000517801 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
FAM49B-204ENST00000517801 ONECUT3O60422 494 aaPredicted RBP11.33□□□□□ -0.6
FAM49B-204ENST00000517801 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
FAM49B-204ENST00000517801 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
FAM49B-204ENST00000517801 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
FAM49B-204ENST00000517801 OATP04181 439 aa11.32□□□□□ -0.6
FAM49B-204ENST00000517801 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
FAM49B-204ENST00000517801 SLC4A5Q9BY07 1137 aa11.32□□□□□ -0.6
FAM49B-204ENST00000517801 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
FAM49B-204ENST00000517801 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
FAM49B-204ENST00000517801 PDE4DQ08499 809 aa11.3□□□□□ -0.6
FAM49B-204ENST00000517801 NEUROD2Q15784 382 aa11.29□□□□□ -0.6
FAM49B-204ENST00000517801 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
FAM49B-204ENST00000517801 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
FAM49B-204ENST00000517801 AMHR2Q16671 573 aa11.28□□□□□ -0.6
FAM49B-204ENST00000517801 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
FAM49B-204ENST00000517801 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
FAM49B-204ENST00000517801 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
FAM49B-204ENST00000517801 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
FAM49B-204ENST00000517801 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
FAM49B-204ENST00000517801 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
FAM49B-204ENST00000517801 LSM11P83369 360 aaKnown RBP eCLIP11.26□□□□□ -0.61
FAM49B-204ENST00000517801 TATDN2Q93075 761 aa11.26□□□□□ -0.61
FAM49B-204ENST00000517801 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
FAM49B-204ENST00000517801 TK2O00142 265 aa11.25□□□□□ -0.61
FAM49B-204ENST00000517801 PHOX2BQ99453 314 aa11.25□□□□□ -0.61
FAM49B-204ENST00000517801 EYA1Q99502 592 aa11.25□□□□□ -0.61
FAM49B-204ENST00000517801 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
FAM49B-204ENST00000517801 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
FAM49B-204ENST00000517801 SMAPO00193 183 aa11.23□□□□□ -0.61
FAM49B-204ENST00000517801 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
FAM49B-204ENST00000517801 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
FAM49B-204ENST00000517801 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
FAM49B-204ENST00000517801 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
FAM49B-204ENST00000517801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
FAM49B-204ENST00000517801 POTEMA6NI47 508 aa11.21□□□□□ -0.61
FAM49B-204ENST00000517801 CLCN1P35523 988 aa11.21□□□□□ -0.61
FAM49B-204ENST00000517801 MDM2Q00987 491 aaPredicted RBP11.21□□□□□ -0.61
FAM49B-204ENST00000517801 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
FAM49B-204ENST00000517801 RCCD1A6NED2 376 aa11.2□□□□□ -0.62
FAM49B-204ENST00000517801 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
FAM49B-204ENST00000517801 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
FAM49B-204ENST00000517801 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
FAM49B-204ENST00000517801 DNAJB2P25686 324 aa11.19□□□□□ -0.62
FAM49B-204ENST00000517801 ANKRD13DQ6ZTN6 518 aa11.19□□□□□ -0.62
FAM49B-204ENST00000517801 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
FAM49B-204ENST00000517801 SEPT9Q9UHD8 586 aaPredicted RBP11.19□□□□□ -0.62
FAM49B-204ENST00000517801 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
FAM49B-204ENST00000517801 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
FAM49B-204ENST00000517801 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
FAM49B-204ENST00000517801 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
FAM49B-204ENST00000517801 REPIN1Q9BWE0 567 aaKnown RBP11.17□□□□□ -0.62
FAM49B-204ENST00000517801 KRTAP3-3Q9BYR6 98 aa11.17□□□□□ -0.62
FAM49B-204ENST00000517801 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
FAM49B-204ENST00000517801 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
FAM49B-204ENST00000517801 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
FAM49B-204ENST00000517801 HRO43593 1189 aa11.15□□□□□ -0.62
FAM49B-204ENST00000517801 CDAN1Q8IWY9 1227 aa11.15□□□□□ -0.62
FAM49B-204ENST00000517801 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms