RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 MLH3Q9UHC1 1453 aa16.79■□□□□ 0.28
SPIDR-203ENST00000517693 KANK1Q14678 1352 aa16.79■□□□□ 0.28
SPIDR-203ENST00000517693 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
SPIDR-203ENST00000517693 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
SPIDR-203ENST00000517693 DIP2BQ9P265 1576 aa16.77■□□□□ 0.28
SPIDR-203ENST00000517693 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.28
SPIDR-203ENST00000517693 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
SPIDR-203ENST00000517693 ATP10AO60312 1499 aa16.75■□□□□ 0.27
SPIDR-203ENST00000517693 CCDC144AA2RUR9 1427 aa16.75■□□□□ 0.27
SPIDR-203ENST00000517693 PRDM15P57071 1507 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-203ENST00000517693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.271e-6■■■■□ 21
SPIDR-203ENST00000517693 A2MP01023 1474 aa16.73■□□□□ 0.27
SPIDR-203ENST00000517693 TET3O43151 1660 aa16.72■□□□□ 0.27
SPIDR-203ENST00000517693 VWDEQ8N2E2 1590 aa16.71■□□□□ 0.27
SPIDR-203ENST00000517693 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
SPIDR-203ENST00000517693 RNF17Q9BXT8 1623 aaKnown RBP16.7■□□□□ 0.26
SPIDR-203ENST00000517693 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
SPIDR-203ENST00000517693 RICTORQ6R327 1708 aa16.69■□□□□ 0.26
SPIDR-203ENST00000517693 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
SPIDR-203ENST00000517693 KIF3BO15066 747 aa16.67■□□□□ 0.26
SPIDR-203ENST00000517693 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
SPIDR-203ENST00000517693 LMTK2Q8IWU2 1503 aa16.66■□□□□ 0.26
SPIDR-203ENST00000517693 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.266e-6■■■■□ 25.1
SPIDR-203ENST00000517693 ABCA6Q8N139 1617 aa16.66■□□□□ 0.26
SPIDR-203ENST00000517693 TRPM2O94759 1503 aa16.65■□□□□ 0.26
SPIDR-203ENST00000517693 E9PCH4 1651 aa16.65■□□□□ 0.26
SPIDR-203ENST00000517693 MROH1Q8NDA8 1641 aa16.65■□□□□ 0.26
SPIDR-203ENST00000517693 SPHKAPQ2M3C7 1700 aa16.64■□□□□ 0.25
SPIDR-203ENST00000517693 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
SPIDR-203ENST00000517693 PLA2R1Q13018 1463 aa16.63■□□□□ 0.25
SPIDR-203ENST00000517693 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
SPIDR-203ENST00000517693 FRMPD1Q5SYB0 1578 aa16.62■□□□□ 0.25
SPIDR-203ENST00000517693 PTPRTO14522 1441 aa16.62■□□□□ 0.25
SPIDR-203ENST00000517693 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
SPIDR-203ENST00000517693 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
SPIDR-203ENST00000517693 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
SPIDR-203ENST00000517693 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
SPIDR-203ENST00000517693 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
SPIDR-203ENST00000517693 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
SPIDR-203ENST00000517693 ZC3H13Q5T200 1668 aaKnown RBP16.59■□□□□ 0.25
SPIDR-203ENST00000517693 CEP152O94986 1710 aa16.58■□□□□ 0.24
SPIDR-203ENST00000517693 NBPF8Q3BBV2 869 aa16.58■□□□□ 0.24
SPIDR-203ENST00000517693 TSPOAP1O95153 1857 aa16.58■□□□□ 0.24
SPIDR-203ENST00000517693 REREQ9P2R6 1566 aa16.57■□□□□ 0.24
SPIDR-203ENST00000517693 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
SPIDR-203ENST00000517693 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
SPIDR-203ENST00000517693 PRAG1Q86YV5 1406 aa16.54■□□□□ 0.24
SPIDR-203ENST00000517693 ABCC3O15438 1527 aa16.53■□□□□ 0.24
SPIDR-203ENST00000517693 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
SPIDR-203ENST00000517693 MIER1Q8N108 512 aa16.53■□□□□ 0.24
SPIDR-203ENST00000517693 SPATA31E1Q6ZUB1 1445 aa16.53■□□□□ 0.24
SPIDR-203ENST00000517693 CLTCL1P53675 1640 aa16.53■□□□□ 0.24
SPIDR-203ENST00000517693 POLR1AO95602 1720 aaPredicted RBP16.52■□□□□ 0.24
SPIDR-203ENST00000517693 LAMC1P11047 1609 aa16.52■□□□□ 0.24
SPIDR-203ENST00000517693 CNTLNQ9NXG0 1405 aa16.51■□□□□ 0.23
SPIDR-203ENST00000517693 USP47Q96K76 1375 aa16.51■□□□□ 0.23
SPIDR-203ENST00000517693 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
SPIDR-203ENST00000517693 AGLP35573 1532 aa16.51■□□□□ 0.23
SPIDR-203ENST00000517693 CAMSAP1Q5T5Y3 1602 aa16.51■□□□□ 0.23
SPIDR-203ENST00000517693 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
SPIDR-203ENST00000517693 WASHC2CQ9Y4E1 1318 aa16.5■□□□□ 0.23
SPIDR-203ENST00000517693 GGT6Q6P531 493 aa16.5■□□□□ 0.23
SPIDR-203ENST00000517693 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
SPIDR-203ENST00000517693 ARHGAP31Q2M1Z3 1444 aa16.5■□□□□ 0.23
SPIDR-203ENST00000517693 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
SPIDR-203ENST00000517693 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
SPIDR-203ENST00000517693 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
SPIDR-203ENST00000517693 KIF1BO60333 1816 aa16.49■□□□□ 0.23
SPIDR-203ENST00000517693 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-203ENST00000517693 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
SPIDR-203ENST00000517693 HIRIP3Q9BW71 556 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-203ENST00000517693 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
SPIDR-203ENST00000517693 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
SPIDR-203ENST00000517693 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
SPIDR-203ENST00000517693 NPATQ14207 1427 aa16.47■□□□□ 0.23
SPIDR-203ENST00000517693 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-203ENST00000517693 CCDC7Q96M83 1385 aa16.45■□□□□ 0.22
SPIDR-203ENST00000517693 MYOM2P54296 1465 aa16.44■□□□□ 0.22
SPIDR-203ENST00000517693 ANP32CO43423 234 aa16.44■□□□□ 0.22
SPIDR-203ENST00000517693 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
SPIDR-203ENST00000517693 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
SPIDR-203ENST00000517693 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
SPIDR-203ENST00000517693 NOS1P29475 1434 aa16.42■□□□□ 0.22
SPIDR-203ENST00000517693 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
SPIDR-203ENST00000517693 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
SPIDR-203ENST00000517693 IFT172Q9UG01 1749 aa16.38■□□□□ 0.21
SPIDR-203ENST00000517693 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
SPIDR-203ENST00000517693 UGGT1Q9NYU2 1555 aa16.37■□□□□ 0.21
SPIDR-203ENST00000517693 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
SPIDR-203ENST00000517693 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
SPIDR-203ENST00000517693 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
SPIDR-203ENST00000517693 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
SPIDR-203ENST00000517693 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
SPIDR-203ENST00000517693 EIF3AQ14152 1382 aaKnown RBP16.35■□□□□ 0.21
SPIDR-203ENST00000517693 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
SPIDR-203ENST00000517693 SYNMO15061 1565 aa16.34■□□□□ 0.21
SPIDR-203ENST00000517693 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
SPIDR-203ENST00000517693 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
SPIDR-203ENST00000517693 NRXN1Q9ULB1 1477 aa16.34■□□□□ 0.21
SPIDR-203ENST00000517693 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms