RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 KHSRPQ92945 711 aaKnown RBP eCLIP6.69□□□□□ -1.342e-7■■■□□ 16.3
SKP1-203ENST00000517625 BCL2L12Q9HB09 334 aa6.69□□□□□ -1.34
SKP1-203ENST00000517625 SLC24A3Q9HC58 644 aa6.69□□□□□ -1.34
SKP1-203ENST00000517625 C6orf132Q5T0Z8 1188 aa6.68□□□□□ -1.34
SKP1-203ENST00000517625 RBM33Q96EV2 1170 aaKnown RBP6.68□□□□□ -1.34
SKP1-203ENST00000517625 DAXXQ9UER7 740 aaPredicted RBP6.68□□□□□ -1.34
SKP1-203ENST00000517625 KCNH8Q96L42 1107 aa6.67□□□□□ -1.34
SKP1-203ENST00000517625 ADAM33Q9BZ11 813 aa6.67□□□□□ -1.34
SKP1-203ENST00000517625 CDHR5Q9HBB8 845 aa6.67□□□□□ -1.34
SKP1-203ENST00000517625 NPDC1Q9NQX5 325 aaPredicted RBP6.67□□□□□ -1.34
SKP1-203ENST00000517625 IRF6O14896 467 aa6.66□□□□□ -1.34
SKP1-203ENST00000517625 PTPREP23469 700 aa6.66□□□□□ -1.34
SKP1-203ENST00000517625 TSR1Q2NL82 804 aaKnown RBP6.66□□□□□ -1.34
SKP1-203ENST00000517625 PPP1R3GB7ZBB8 358 aa6.65□□□□□ -1.34
SKP1-203ENST00000517625 CCDC102AQ96A19 550 aa6.65□□□□□ -1.34
SKP1-203ENST00000517625 TRIM66O15016 1216 aa6.64□□□□□ -1.35
SKP1-203ENST00000517625 AMHR2Q16671 573 aa6.64□□□□□ -1.35
SKP1-203ENST00000517625 PBX2P40425 430 aa6.63□□□□□ -1.35
SKP1-203ENST00000517625 BRPF1P55201 1214 aaPredicted RBP6.63□□□□□ -1.35
SKP1-203ENST00000517625 TTC13Q8NBP0 860 aa6.63□□□□□ -1.35
SKP1-203ENST00000517625 ERBB3P21860 1342 aa6.62□□□□□ -1.35
SKP1-203ENST00000517625 ST18O60284 1047 aa6.62□□□□□ -1.35
SKP1-203ENST00000517625 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
SKP1-203ENST00000517625 OATP04181 439 aa6.62□□□□□ -1.35
SKP1-203ENST00000517625 PRSS12P56730 875 aa6.62□□□□□ -1.35
SKP1-203ENST00000517625 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
SKP1-203ENST00000517625 FECHP22830 423 aa6.61□□□□□ -1.35
SKP1-203ENST00000517625 EMP3P54852 163 aa6.61□□□□□ -1.35
SKP1-203ENST00000517625 PDE4DQ08499 809 aa6.61□□□□□ -1.35
SKP1-203ENST00000517625 TMEM132AQ24JP5 1023 aa6.6□□□□□ -1.35
SKP1-203ENST00000517625 PADI6Q6TGC4 694 aa6.6□□□□□ -1.35
SKP1-203ENST00000517625 CDCA7LQ96GN5 454 aa6.6□□□□□ -1.35
SKP1-203ENST00000517625 SLC4A5Q9BY07 1137 aa6.6□□□□□ -1.35
SKP1-203ENST00000517625 ADGRG1Q9Y653 693 aa6.59□□□□□ -1.35
SKP1-203ENST00000517625 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
SKP1-203ENST00000517625 ARHGAP33O14559 1287 aa6.58□□□□□ -1.36
SKP1-203ENST00000517625 VARS2Q5ST30 1063 aaKnown RBP6.58□□□□□ -1.36
SKP1-203ENST00000517625 METTL3Q86U44 580 aaKnown RBP6.58□□□□□ -1.36
SKP1-203ENST00000517625 RBM46Q8TBY0 533 aaKnown RBP6.58□□□□□ -1.36
SKP1-203ENST00000517625 KCNK17Q96T54 332 aa6.58□□□□□ -1.36
SKP1-203ENST00000517625 TRIM6-TRIM34B2RNG4 842 aa6.57□□□□□ -1.36
SKP1-203ENST00000517625 COL9A1P20849 921 aa6.57□□□□□ -1.36
SKP1-203ENST00000517625 CLCN1P35523 988 aa6.57□□□□□ -1.36
SKP1-203ENST00000517625 PACS2Q86VP3 889 aa6.57□□□□□ -1.36
SKP1-203ENST00000517625 ZNF687Q8N1G0 1237 aa6.57□□□□□ -1.36
SKP1-203ENST00000517625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.56□□□□□ -1.36
SKP1-203ENST00000517625 PARP9Q8IXQ6 854 aa6.56□□□□□ -1.36
SKP1-203ENST00000517625 PXYLP1Q8TE99 480 aa6.56□□□□□ -1.36
SKP1-203ENST00000517625 KDM4CQ9H3R0 1056 aa6.56□□□□□ -1.36
SKP1-203ENST00000517625 TTLL12Q14166 644 aaPredicted RBP6.55□□□□□ -1.36
SKP1-203ENST00000517625 ZBED2Q9BTP6 218 aa6.55□□□□□ -1.36
SKP1-203ENST00000517625 GPCPD1Q9NPB8 672 aa6.55□□□□□ -1.36
SKP1-203ENST00000517625 FAM163AQ96GL9 167 aaPredicted RBP6.54□□□□□ -1.36
SKP1-203ENST00000517625 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
SKP1-203ENST00000517625 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
SKP1-203ENST00000517625 TSKSQ9UJT2 592 aa6.54□□□□□ -1.36
SKP1-203ENST00000517625 FAM205CA6NFA0 338 aa6.53□□□□□ -1.36
SKP1-203ENST00000517625 TK2O00142 265 aa6.53□□□□□ -1.36
SKP1-203ENST00000517625 MARVELD3Q96A59 401 aa6.53□□□□□ -1.36
SKP1-203ENST00000517625 HS3ST6Q96QI5 342 aa6.53□□□□□ -1.36
SKP1-203ENST00000517625 EYA1Q99502 592 aa6.53□□□□□ -1.36
SKP1-203ENST00000517625 RABGEF1Q9UJ41 708 aa6.53□□□□□ -1.36
SKP1-203ENST00000517625 DNAJB2P25686 324 aa6.52□□□□□ -1.37
SKP1-203ENST00000517625 GIGYF2Q6Y7W6 1299 aaKnown RBP6.52□□□□□ -1.37
SKP1-203ENST00000517625 TATDN2Q93075 761 aa6.52□□□□□ -1.37
SKP1-203ENST00000517625 GPBP1L1Q9HC44 474 aaPredicted RBP6.52□□□□□ -1.37
SKP1-203ENST00000517625 FAM198AQ9UFP1 575 aa6.52□□□□□ -1.37
SKP1-203ENST00000517625 PSEN2P49810 448 aa6.51□□□□□ -1.37
SKP1-203ENST00000517625 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
SKP1-203ENST00000517625 NBPF3Q9H094 633 aa6.51□□□□□ -1.37
SKP1-203ENST00000517625 MDM2Q00987 491 aaPredicted RBP6.5□□□□□ -1.37
SKP1-203ENST00000517625 PROX2Q3B8N5 592 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 POTEEQ6S8J3 1075 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 NUDT18Q6ZVK8 323 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 SULF1Q8IWU6 871 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 PHOX2BQ99453 314 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 PNMA3Q9UL41 463 aa6.5□□□□□ -1.37
SKP1-203ENST00000517625 RCCD1A6NED2 376 aa6.49□□□□□ -1.37
SKP1-203ENST00000517625 GOPCQ9HD26 462 aa6.49□□□□□ -1.37
SKP1-203ENST00000517625 FAM217BQ9NTX9 383 aaPredicted RBP6.49□□□□□ -1.37
SKP1-203ENST00000517625 KIAA1468Q9P260 1216 aa6.49□□□□□ -1.37
SKP1-203ENST00000517625 VPS9D1Q9Y2B5 631 aa6.49□□□□□ -1.37
SKP1-203ENST00000517625 SLC4A3P48751 1232 aa6.48□□□□□ -1.37
SKP1-203ENST00000517625 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
SKP1-203ENST00000517625 FAM161AQ3B820 660 aa6.48□□□□□ -1.37
SKP1-203ENST00000517625 DMRTA1Q5VZB9 504 aa6.48□□□□□ -1.37
SKP1-203ENST00000517625 TMEM134Q9H6X4 195 aa6.48□□□□□ -1.37
SKP1-203ENST00000517625 LSM11P83369 360 aaKnown RBP eCLIP6.47□□□□□ -1.37
SKP1-203ENST00000517625 DIXDC1Q155Q3 683 aa6.47□□□□□ -1.37
SKP1-203ENST00000517625 SSTR3P32745 418 aaPredicted RBP6.46□□□□□ -1.38
SKP1-203ENST00000517625 RSPH4AQ5TD94 716 aa6.46□□□□□ -1.38
SKP1-203ENST00000517625 NECTIN2Q92692 538 aa6.46□□□□□ -1.38
SKP1-203ENST00000517625 REPIN1Q9BWE0 567 aaKnown RBP6.46□□□□□ -1.38
SKP1-203ENST00000517625 RSPH6AQ9H0K4 717 aa6.46□□□□□ -1.38
SKP1-203ENST00000517625 AXIN2Q9Y2T1 843 aa6.46□□□□□ -1.38
SKP1-203ENST00000517625 POTEB3A0JP26 581 aa6.45□□□□□ -1.38
SKP1-203ENST00000517625 BHMG1C9JSJ3 638 aaPredicted RBP6.45□□□□□ -1.38
SKP1-203ENST00000517625 MS4A1P11836 297 aa6.45□□□□□ -1.38
SKP1-203ENST00000517625 HDGFP51858 240 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms