RNA–Protein interactions for RNA: ENST00000517553.1

TRAPPC2-205, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-205ENST00000517553 ADAM33Q9BZ11 813 aa6.7□□□□□ -1.34
TRAPPC2-205ENST00000517553 BCAMP50895 628 aa6.68□□□□□ -1.34
TRAPPC2-205ENST00000517553 NBPF3Q9H094 633 aa6.68□□□□□ -1.34
TRAPPC2-205ENST00000517553 KDM2AQ9Y2K7 1162 aa6.68□□□□□ -1.34
TRAPPC2-205ENST00000517553 NRG2O14511 850 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC2-205ENST00000517553 EVI5O60447 810 aa6.67□□□□□ -1.34
TRAPPC2-205ENST00000517553 ITGBL1O95965 494 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC2-205ENST00000517553 PROX2Q3B8N5 592 aa6.67□□□□□ -1.34
TRAPPC2-205ENST00000517553 ZDHHC16Q969W1 377 aa6.67□□□□□ -1.34
TRAPPC2-205ENST00000517553 BCANQ96GW7 911 aa6.67□□□□□ -1.34
TRAPPC2-205ENST00000517553 PPP1R15BQ5SWA1 713 aa6.65□□□□□ -1.34
TRAPPC2-205ENST00000517553 P3H3Q8IVL6 736 aa6.64□□□□□ -1.35
TRAPPC2-205ENST00000517553 ANKK1Q8NFD2 765 aa6.64□□□□□ -1.35
TRAPPC2-205ENST00000517553 ANO8Q9HCE9 1232 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC2-205ENST00000517553 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC2-205ENST00000517553 WBP1LQ9NX94 342 aa6.63□□□□□ -1.35
TRAPPC2-205ENST00000517553 COL9A1P20849 921 aa6.62□□□□□ -1.35
TRAPPC2-205ENST00000517553 MAP3K9P80192 1104 aa6.62□□□□□ -1.35
TRAPPC2-205ENST00000517553 JPH4Q96JJ6 628 aa6.62□□□□□ -1.35
TRAPPC2-205ENST00000517553 WDR70Q9NW82 654 aa6.62□□□□□ -1.35
TRAPPC2-205ENST00000517553 KCNC4Q03721 635 aa6.61□□□□□ -1.35
TRAPPC2-205ENST00000517553 CRISPLD2Q9H0B8 497 aa6.61□□□□□ -1.35
TRAPPC2-205ENST00000517553 RABGEF1Q9UJ41 708 aa6.61□□□□□ -1.35
TRAPPC2-205ENST00000517553 SOWAHBA6NEL2 793 aa6.6□□□□□ -1.35
TRAPPC2-205ENST00000517553 KIAA1468Q9P260 1216 aa6.6□□□□□ -1.35
TRAPPC2-205ENST00000517553 NCKAP5LQ9HCH0 1330 aa6.59□□□□□ -1.35
TRAPPC2-205ENST00000517553 PDE4AP27815 886 aa6.59□□□□□ -1.35
TRAPPC2-205ENST00000517553 ZFRQ96KR1 1074 aaKnown RBP6.59□□□□□ -1.35
TRAPPC2-205ENST00000517553 SEPT9Q9UHD8 586 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC2-205ENST00000517553 PCDHGA10Q9Y5H3 936 aa6.59□□□□□ -1.35
TRAPPC2-205ENST00000517553 PPP1R3GB7ZBB8 358 aa6.58□□□□□ -1.36
TRAPPC2-205ENST00000517553 TREML4Q6UXN2 200 aa6.58□□□□□ -1.36
TRAPPC2-205ENST00000517553 LARP6Q9BRS8 491 aaKnown RBP6.58□□□□□ -1.36
TRAPPC2-205ENST00000517553 POTECB2RU33 542 aa6.57□□□□□ -1.36
TRAPPC2-205ENST00000517553 NBR1Q14596 966 aa6.57□□□□□ -1.36
TRAPPC2-205ENST00000517553 CADPS2Q86UW7 1296 aa6.57□□□□□ -1.36
TRAPPC2-205ENST00000517553 MFSD10Q14728 455 aa6.55□□□□□ -1.36
TRAPPC2-205ENST00000517553 LAPTM4BQ86VI4 370 aa6.54□□□□□ -1.36
TRAPPC2-205ENST00000517553 STK17AQ9UEE5 414 aa6.54□□□□□ -1.36
TRAPPC2-205ENST00000517553 HPS5Q9UPZ3 1129 aa6.54□□□□□ -1.36
TRAPPC2-205ENST00000517553 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
TRAPPC2-205ENST00000517553 DDX27Q96GQ7 796 aaKnown RBP6.53□□□□□ -1.36
TRAPPC2-205ENST00000517553 PRKD2Q9BZL6 878 aa6.53□□□□□ -1.36
TRAPPC2-205ENST00000517553 EMILIN3Q9NT22 766 aa6.53□□□□□ -1.36
TRAPPC2-205ENST00000517553 E2F4Q16254 413 aa6.52□□□□□ -1.37
TRAPPC2-205ENST00000517553 TYW1BQ6NUM6 668 aa6.52□□□□□ -1.37
TRAPPC2-205ENST00000517553 NYAP1Q6ZVC0 841 aa6.52□□□□□ -1.37
TRAPPC2-205ENST00000517553 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC2-205ENST00000517553 ARHGEF1Q92888 912 aaKnown RBP6.51□□□□□ -1.37
TRAPPC2-205ENST00000517553 RBM33Q96EV2 1170 aaKnown RBP6.51□□□□□ -1.37
TRAPPC2-205ENST00000517553 TSR3Q9UJK0 312 aaKnown RBP6.51□□□□□ -1.37
TRAPPC2-205ENST00000517553 C6orf132Q5T0Z8 1188 aa6.5□□□□□ -1.37
TRAPPC2-205ENST00000517553 LRCH3Q96II8 777 aa6.5□□□□□ -1.37
TRAPPC2-205ENST00000517553 PHF14O94880 888 aa6.49□□□□□ -1.37
TRAPPC2-205ENST00000517553 PPP4CP60510 307 aa6.49□□□□□ -1.37
TRAPPC2-205ENST00000517553 KCNV2Q8TDN2 545 aa6.49□□□□□ -1.37
TRAPPC2-205ENST00000517553 FBXW7Q969H0 707 aa6.49□□□□□ -1.37
TRAPPC2-205ENST00000517553 ARIH1Q9Y4X5 557 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC2-205ENST00000517553 CAMK2BQ13554 666 aa6.48□□□□□ -1.37
TRAPPC2-205ENST00000517553 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
TRAPPC2-205ENST00000517553 TRIM6-TRIM34B2RNG4 842 aa6.47□□□□□ -1.37
TRAPPC2-205ENST00000517553 PPP1R18Q6NYC8 613 aa6.47□□□□□ -1.37
TRAPPC2-205ENST00000517553 PDZRN3Q9UPQ7 1066 aa6.47□□□□□ -1.37
TRAPPC2-205ENST00000517553 TULP1O00294 542 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC2-205ENST00000517553 ONECUT3O60422 494 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC2-205ENST00000517553 SMAPO00193 183 aa6.45□□□□□ -1.38
TRAPPC2-205ENST00000517553 TJAP1Q5JTD0 557 aa6.45□□□□□ -1.38
TRAPPC2-205ENST00000517553 ZNF516Q92618 1163 aa6.45□□□□□ -1.38
TRAPPC2-205ENST00000517553 DDX12PQ92771 950 aa6.45□□□□□ -1.38
TRAPPC2-205ENST00000517553 SAMD7Q7Z3H4 446 aa6.43□□□□□ -1.38
TRAPPC2-205ENST00000517553 MTRQ99707 1265 aa6.43□□□□□ -1.38
TRAPPC2-205ENST00000517553 TSKSQ9UJT2 592 aa6.43□□□□□ -1.38
TRAPPC2-205ENST00000517553 PACS2Q86VP3 889 aa6.42□□□□□ -1.38
TRAPPC2-205ENST00000517553 NKX2-3Q8TAU0 364 aa6.42□□□□□ -1.38
TRAPPC2-205ENST00000517553 EPAS1Q99814 870 aa6.42□□□□□ -1.38
TRAPPC2-205ENST00000517553 DPYSL4O14531 572 aa6.41□□□□□ -1.38
TRAPPC2-205ENST00000517553 TSR1Q2NL82 804 aaKnown RBP6.41□□□□□ -1.38
TRAPPC2-205ENST00000517553 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.41□□□□□ -1.38
TRAPPC2-205ENST00000517553 RNF40O75150 1001 aa6.4□□□□□ -1.38
TRAPPC2-205ENST00000517553 MYT1Q01538 1121 aa6.4□□□□□ -1.38
TRAPPC2-205ENST00000517553 SMYD5Q6GMV2 418 aa6.4□□□□□ -1.38
TRAPPC2-205ENST00000517553 IL21Q9HBE4 155 aa6.4□□□□□ -1.38
TRAPPC2-205ENST00000517553 V9GY48 417 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC2-205ENST00000517553 SPDYE16A6NNV3 312 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC2-205ENST00000517553 MAP3K7O43318 606 aa6.38□□□□□ -1.39
TRAPPC2-205ENST00000517553 WFS1O76024 890 aa6.38□□□□□ -1.39
TRAPPC2-205ENST00000517553 C3orf80F5H4A9 247 aa6.37□□□□□ -1.39
TRAPPC2-205ENST00000517553 WIPF1O43516 503 aa6.37□□□□□ -1.39
TRAPPC2-205ENST00000517553 INSM1Q01101 510 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC2-205ENST00000517553 PDIA6Q15084 440 aa6.37□□□□□ -1.39
TRAPPC2-205ENST00000517553 TESPA1A2RU30 521 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC2-205ENST00000517553 COPS2P61201 443 aa6.36□□□□□ -1.39
TRAPPC2-205ENST00000517553 CDCA7LQ96GN5 454 aa6.36□□□□□ -1.39
TRAPPC2-205ENST00000517553 FAM198AQ9UFP1 575 aa6.36□□□□□ -1.39
TRAPPC2-205ENST00000517553 APLP1P51693 650 aa6.35□□□□□ -1.39
TRAPPC2-205ENST00000517553 PNMA3Q9UL41 463 aa6.35□□□□□ -1.39
TRAPPC2-205ENST00000517553 TPRNQ4KMQ1 711 aa6.34□□□□□ -1.39
TRAPPC2-205ENST00000517553 TATDN2Q93075 761 aa6.34□□□□□ -1.39
TRAPPC2-205ENST00000517553 SEMA3EO15041 775 aa6.33□□□□□ -1.4
TRAPPC2-205ENST00000517553 HDGFP51858 240 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms