RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
EFCAB13-203ENST00000517484 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
EFCAB13-203ENST00000517484 DNMT1P26358 1616 aaKnown RBP13.48□□□□□ -0.25
EFCAB13-203ENST00000517484 UHRF1BP1LA0JNW5 1464 aa13.48□□□□□ -0.25
EFCAB13-203ENST00000517484 PZPP20742 1482 aa13.47□□□□□ -0.25
EFCAB13-203ENST00000517484 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
EFCAB13-203ENST00000517484 CDC42BPAQ5VT25 1732 aa13.46□□□□□ -0.25
EFCAB13-203ENST00000517484 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
EFCAB13-203ENST00000517484 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
EFCAB13-203ENST00000517484 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
EFCAB13-203ENST00000517484 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
EFCAB13-203ENST00000517484 DENND4BO75064 1496 aaPredicted RBP13.45□□□□□ -0.26
EFCAB13-203ENST00000517484 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
EFCAB13-203ENST00000517484 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
EFCAB13-203ENST00000517484 USP47Q96K76 1375 aa13.43□□□□□ -0.26
EFCAB13-203ENST00000517484 IDI1Q13907 227 aa13.43□□□□□ -0.26
EFCAB13-203ENST00000517484 MRS2Q9HD23 443 aa13.43□□□□□ -0.26
EFCAB13-203ENST00000517484 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
EFCAB13-203ENST00000517484 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
EFCAB13-203ENST00000517484 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
EFCAB13-203ENST00000517484 ADGRF5Q8IZF2 1346 aa13.41□□□□□ -0.26
EFCAB13-203ENST00000517484 HNRNPUQ00839 825 aaKnown RBP eCLIP13.41□□□□□ -0.26
EFCAB13-203ENST00000517484 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
EFCAB13-203ENST00000517484 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
EFCAB13-203ENST00000517484 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
EFCAB13-203ENST00000517484 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
EFCAB13-203ENST00000517484 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
EFCAB13-203ENST00000517484 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
EFCAB13-203ENST00000517484 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-203ENST00000517484 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-203ENST00000517484 FAM135AQ9P2D6 1515 aa13.37□□□□□ -0.27
EFCAB13-203ENST00000517484 POGKQ9P215 609 aa13.37□□□□□ -0.27
EFCAB13-203ENST00000517484 A2MP01023 1474 aa13.37□□□□□ -0.27
EFCAB13-203ENST00000517484 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
EFCAB13-203ENST00000517484 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
EFCAB13-203ENST00000517484 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
EFCAB13-203ENST00000517484 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
EFCAB13-203ENST00000517484 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
EFCAB13-203ENST00000517484 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 TMF1P82094 1093 aa13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 SLC26A8Q96RN1 970 aa13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 ABCC1P33527 1531 aa13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 PANK3Q9H999 370 aa13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 ATP7AQ04656 1500 aa13.33□□□□□ -0.28
EFCAB13-203ENST00000517484 SHANK2Q9UPX8 1470 aa13.32□□□□□ -0.28
EFCAB13-203ENST00000517484 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
EFCAB13-203ENST00000517484 DUOX2Q9NRD8 1548 aa13.32□□□□□ -0.28
EFCAB13-203ENST00000517484 POGZQ7Z3K3 1410 aa13.32□□□□□ -0.28
EFCAB13-203ENST00000517484 IRX6P78412 446 aaPredicted RBP13.32□□□□□ -0.28
EFCAB13-203ENST00000517484 SOX12O15370 315 aa13.31□□□□□ -0.28
EFCAB13-203ENST00000517484 UGGT1Q9NYU2 1555 aa13.3□□□□□ -0.28
EFCAB13-203ENST00000517484 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
EFCAB13-203ENST00000517484 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
EFCAB13-203ENST00000517484 PLA2R1Q13018 1463 aa13.3□□□□□ -0.28
EFCAB13-203ENST00000517484 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
EFCAB13-203ENST00000517484 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
EFCAB13-203ENST00000517484 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
EFCAB13-203ENST00000517484 KNSTRNQ9Y448 316 aa13.28□□□□□ -0.28
EFCAB13-203ENST00000517484 COL17A1Q9UMD9 1497 aaPredicted RBP13.28□□□□□ -0.28
EFCAB13-203ENST00000517484 CABP2Q9NPB3 220 aa13.28□□□□□ -0.28
EFCAB13-203ENST00000517484 WAPLQ7Z5K2 1190 aa13.27□□□□□ -0.28
EFCAB13-203ENST00000517484 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.29
EFCAB13-203ENST00000517484 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.29
EFCAB13-203ENST00000517484 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
EFCAB13-203ENST00000517484 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
EFCAB13-203ENST00000517484 GCC2Q8IWJ2 1684 aa13.26□□□□□ -0.29
EFCAB13-203ENST00000517484 C14orf37Q86TY3 774 aa13.26□□□□□ -0.29
EFCAB13-203ENST00000517484 NOS1P29475 1434 aa13.25□□□□□ -0.29
EFCAB13-203ENST00000517484 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
EFCAB13-203ENST00000517484 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
EFCAB13-203ENST00000517484 ZFYVE16Q7Z3T8 1539 aa13.24□□□□□ -0.29
EFCAB13-203ENST00000517484 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
EFCAB13-203ENST00000517484 NPATQ14207 1427 aa13.23□□□□□ -0.29
EFCAB13-203ENST00000517484 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
EFCAB13-203ENST00000517484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.29
EFCAB13-203ENST00000517484 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
EFCAB13-203ENST00000517484 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
EFCAB13-203ENST00000517484 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
EFCAB13-203ENST00000517484 NEO1Q92859 1461 aa13.2□□□□□ -0.3
EFCAB13-203ENST00000517484 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
EFCAB13-203ENST00000517484 DISP3Q9P2K9 1392 aa13.19□□□□□ -0.3
EFCAB13-203ENST00000517484 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
EFCAB13-203ENST00000517484 ZMYM3Q14202 1370 aa13.19□□□□□ -0.3
EFCAB13-203ENST00000517484 ATP10AO60312 1499 aa13.18□□□□□ -0.3
EFCAB13-203ENST00000517484 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
EFCAB13-203ENST00000517484 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
EFCAB13-203ENST00000517484 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
EFCAB13-203ENST00000517484 NEFLP07196 543 aa13.17□□□□□ -0.3
EFCAB13-203ENST00000517484 FBLN1P23142 703 aa13.17□□□□□ -0.3
EFCAB13-203ENST00000517484 TESK2Q96S53 571 aa13.17□□□□□ -0.3
EFCAB13-203ENST00000517484 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
EFCAB13-203ENST00000517484 FKBP8Q14318 412 aa13.16□□□□□ -0.3
EFCAB13-203ENST00000517484 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
EFCAB13-203ENST00000517484 PRDM15P57071 1507 aaPredicted RBP13.15□□□□□ -0.3
EFCAB13-203ENST00000517484 CDCA8Q53HL2 280 aa13.15□□□□□ -0.3
EFCAB13-203ENST00000517484 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.3
EFCAB13-203ENST00000517484 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
EFCAB13-203ENST00000517484 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
EFCAB13-203ENST00000517484 HSPA2P54652 639 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms