RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
PCDHGA1-202ENST00000517417 STK26Q9P289 416 aa13.98□□□□□ -0.17
PCDHGA1-202ENST00000517417 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
PCDHGA1-202ENST00000517417 PDE3BQ13370 1112 aa13.98□□□□□ -0.17
PCDHGA1-202ENST00000517417 CFAP43Q8NDM7 1665 aa13.97□□□□□ -0.17
PCDHGA1-202ENST00000517417 HNRNPMP52272 730 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHGA1-202ENST00000517417 EFCAB2Q5VUJ9 269 aa13.97□□□□□ -0.17
PCDHGA1-202ENST00000517417 IQGAP2Q13576 1575 aa13.97□□□□□ -0.17
PCDHGA1-202ENST00000517417 PLIN1O60240 522 aa13.97□□□□□ -0.17
PCDHGA1-202ENST00000517417 SAMD9Q5K651 1589 aa13.96□□□□□ -0.17
PCDHGA1-202ENST00000517417 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
PCDHGA1-202ENST00000517417 BECN1Q14457 450 aa13.95□□□□□ -0.18
PCDHGA1-202ENST00000517417 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA1-202ENST00000517417 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
PCDHGA1-202ENST00000517417 KANK1Q14678 1352 aa13.94□□□□□ -0.18
PCDHGA1-202ENST00000517417 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
PCDHGA1-202ENST00000517417 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
PCDHGA1-202ENST00000517417 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA1-202ENST00000517417 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
PCDHGA1-202ENST00000517417 CDK13Q14004 1512 aaKnown RBP13.92□□□□□ -0.18
PCDHGA1-202ENST00000517417 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
PCDHGA1-202ENST00000517417 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
PCDHGA1-202ENST00000517417 CRBNQ96SW2 442 aa13.92□□□□□ -0.18
PCDHGA1-202ENST00000517417 MS4A1P11836 297 aa13.91□□□□□ -0.18
PCDHGA1-202ENST00000517417 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA1-202ENST00000517417 KIF3BO15066 747 aa13.91□□□□□ -0.18
PCDHGA1-202ENST00000517417 SLC4A3P48751 1232 aa13.9□□□□□ -0.18
PCDHGA1-202ENST00000517417 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.18
PCDHGA1-202ENST00000517417 KIAA0586Q9BVV6 1533 aa13.89□□□□□ -0.19
PCDHGA1-202ENST00000517417 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA1-202ENST00000517417 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
PCDHGA1-202ENST00000517417 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
PCDHGA1-202ENST00000517417 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
PCDHGA1-202ENST00000517417 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
PCDHGA1-202ENST00000517417 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
PCDHGA1-202ENST00000517417 DAPK1P53355 1430 aa13.88□□□□□ -0.19
PCDHGA1-202ENST00000517417 MAGI3Q5TCQ9 1506 aa13.88□□□□□ -0.19
PCDHGA1-202ENST00000517417 EPRSP07814 1512 aaKnown RBP13.87□□□□□ -0.19
PCDHGA1-202ENST00000517417 NUTM2DQ5VT03 806 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA1-202ENST00000517417 HECW1Q76N89 1606 aa13.87□□□□□ -0.19
PCDHGA1-202ENST00000517417 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
PCDHGA1-202ENST00000517417 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
PCDHGA1-202ENST00000517417 PANK3Q9H999 370 aa13.86□□□□□ -0.19
PCDHGA1-202ENST00000517417 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA1-202ENST00000517417 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
PCDHGA1-202ENST00000517417 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
PCDHGA1-202ENST00000517417 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA1-202ENST00000517417 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCDHGA1-202ENST00000517417 GSE1Q14687 1217 aa13.84□□□□□ -0.19
PCDHGA1-202ENST00000517417 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
PCDHGA1-202ENST00000517417 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
PCDHGA1-202ENST00000517417 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
PCDHGA1-202ENST00000517417 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
PCDHGA1-202ENST00000517417 CENPQQ7L2Z9 268 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA1-202ENST00000517417 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
PCDHGA1-202ENST00000517417 ROCK1Q13464 1354 aa13.82□□□□□ -0.2
PCDHGA1-202ENST00000517417 ANKRD50Q9ULJ7 1429 aa13.82□□□□□ -0.2
PCDHGA1-202ENST00000517417 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
PCDHGA1-202ENST00000517417 GOLGA6L22H0YM25 854 aa13.81□□□□□ -0.2
PCDHGA1-202ENST00000517417 PLB1Q6P1J6 1458 aa13.81□□□□□ -0.2
PCDHGA1-202ENST00000517417 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
PCDHGA1-202ENST00000517417 SPAG9O60271 1321 aaKnown RBP13.8□□□□□ -0.2
PCDHGA1-202ENST00000517417 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
PCDHGA1-202ENST00000517417 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
PCDHGA1-202ENST00000517417 KIAA0556O60303 1618 aa13.8□□□□□ -0.2
PCDHGA1-202ENST00000517417 ABCC5O15440 1437 aa13.79□□□□□ -0.2
PCDHGA1-202ENST00000517417 HDGFP51858 240 aaKnown RBP13.79□□□□□ -0.2
PCDHGA1-202ENST00000517417 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
PCDHGA1-202ENST00000517417 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
PCDHGA1-202ENST00000517417 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA1-202ENST00000517417 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA1-202ENST00000517417 NFKBIBQ15653 356 aa13.78□□□□□ -0.2
PCDHGA1-202ENST00000517417 NUP153P49790 1475 aaKnown RBP13.78□□□□□ -0.2
PCDHGA1-202ENST00000517417 APBB1O00213 710 aa13.77□□□□□ -0.2
PCDHGA1-202ENST00000517417 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA1-202ENST00000517417 OS9Q13438 667 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA1-202ENST00000517417 TRIM44Q96DX7 344 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA1-202ENST00000517417 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.21
PCDHGA1-202ENST00000517417 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
PCDHGA1-202ENST00000517417 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
PCDHGA1-202ENST00000517417 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
PCDHGA1-202ENST00000517417 FAM69CQ0P6D2 419 aa13.76□□□□□ -0.21
PCDHGA1-202ENST00000517417 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
PCDHGA1-202ENST00000517417 SKAP1Q86WV1 359 aa13.74□□□□□ -0.21
PCDHGA1-202ENST00000517417 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
PCDHGA1-202ENST00000517417 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
PCDHGA1-202ENST00000517417 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
PCDHGA1-202ENST00000517417 GLIPR1L2Q4G1C9 344 aa13.74□□□□□ -0.21
PCDHGA1-202ENST00000517417 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
PCDHGA1-202ENST00000517417 L1TD1Q5T7N2 865 aaKnown RBP13.73□□□□□ -0.21
PCDHGA1-202ENST00000517417 ADAMTS8Q9UP79 889 aa13.73□□□□□ -0.21
PCDHGA1-202ENST00000517417 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
PCDHGA1-202ENST00000517417 NUP160Q12769 1436 aa13.72□□□□□ -0.21
PCDHGA1-202ENST00000517417 HSP90AB1P08238 724 aaKnown RBP13.72□□□□□ -0.21
PCDHGA1-202ENST00000517417 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
PCDHGA1-202ENST00000517417 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
PCDHGA1-202ENST00000517417 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.21
PCDHGA1-202ENST00000517417 TROQ12816 1431 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA1-202ENST00000517417 ARHGEF11O15085 1522 aa13.7□□□□□ -0.22
PCDHGA1-202ENST00000517417 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms