RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
HOXA11-202ENST00000517402 ATP7AQ04656 1500 aa27.55■■■□□ 2
HOXA11-202ENST00000517402 POLR1AO95602 1720 aaPredicted RBP27.55■■■□□ 2
HOXA11-202ENST00000517402 SCAPERQ9BY12 1400 aa27.54■■■□□ 2
HOXA11-202ENST00000517402 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
HOXA11-202ENST00000517402 DCAF11Q8TEB1 546 aa27.53■■■□□ 2
HOXA11-202ENST00000517402 KDM5CP41229 1560 aa27.53■■■□□ 2
HOXA11-202ENST00000517402 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
HOXA11-202ENST00000517402 USP47Q96K76 1375 aa27.53■■■□□ 2
HOXA11-202ENST00000517402 CNTLNQ9NXG0 1405 aa27.52■■■□□ 2
HOXA11-202ENST00000517402 CCER2I3L3R5 266 aa27.5■■□□□ 1.99
HOXA11-202ENST00000517402 KIF7Q2M1P5 1343 aa27.49■■□□□ 1.99
HOXA11-202ENST00000517402 BCORL1Q5H9F3 1711 aa27.49■■□□□ 1.99
HOXA11-202ENST00000517402 RGL3Q3MIN7 710 aa27.46■■□□□ 1.99
HOXA11-202ENST00000517402 MYT1LQ9UL68 1186 aa27.46■■□□□ 1.99
HOXA11-202ENST00000517402 DEPDC5O75140 1603 aa27.46■■□□□ 1.99
HOXA11-202ENST00000517402 E9PCH4 1651 aa27.45■■□□□ 1.99
HOXA11-202ENST00000517402 A2MP01023 1474 aa27.43■■□□□ 1.98
HOXA11-202ENST00000517402 CARD11Q9BXL7 1154 aa27.43■■□□□ 1.98
HOXA11-202ENST00000517402 ATP10AO60312 1499 aa27.42■■□□□ 1.98
HOXA11-202ENST00000517402 RIMBP3CA6NJZ7 1639 aa27.42■■□□□ 1.98
HOXA11-202ENST00000517402 RIMBP3BA6NNM3 1639 aa27.42■■□□□ 1.98
HOXA11-202ENST00000517402 RIMBP3Q9UFD9 1639 aa27.42■■□□□ 1.98
HOXA11-202ENST00000517402 CD109Q6YHK3 1445 aa27.41■■□□□ 1.98
HOXA11-202ENST00000517402 KIDINS220Q9ULH0 1771 aa27.41■■□□□ 1.98
HOXA11-202ENST00000517402 PRAG1Q86YV5 1406 aa27.4■■□□□ 1.98
HOXA11-202ENST00000517402 TRPM1Q7Z4N2 1603 aa27.39■■□□□ 1.98
HOXA11-202ENST00000517402 CYB5RLQ6IPT4 315 aa27.38■■□□□ 1.97
HOXA11-202ENST00000517402 ZNF518AQ6AHZ1 1483 aa27.37■■□□□ 1.97
HOXA11-202ENST00000517402 ROCK2O75116 1388 aaKnown RBP27.36■■□□□ 1.97
HOXA11-202ENST00000517402 KIF3BO15066 747 aa27.35■■□□□ 1.97
HOXA11-202ENST00000517402 MROH1Q8NDA8 1641 aa27.35■■□□□ 1.97
HOXA11-202ENST00000517402 EIF2AK4Q9P2K8 1649 aaKnown RBP27.35■■□□□ 1.97
HOXA11-202ENST00000517402 POLR3GLQ9BT43 218 aa27.34■■□□□ 1.97
HOXA11-202ENST00000517402 CFAP74Q9C0B2 1584 aa27.34■■□□□ 1.97
HOXA11-202ENST00000517402 TET3O43151 1660 aa27.34■■□□□ 1.97
HOXA11-202ENST00000517402 SPHKAPQ2M3C7 1700 aa27.34■■□□□ 1.97
HOXA11-202ENST00000517402 DHX29Q7Z478 1369 aaKnown RBP27.33■■□□□ 1.97
HOXA11-202ENST00000517402 VWDEQ8N2E2 1590 aa27.33■■□□□ 1.97
HOXA11-202ENST00000517402 PRDM15P57071 1507 aaPredicted RBP27.32■■□□□ 1.96
HOXA11-202ENST00000517402 TRPM2O94759 1503 aa27.31■■□□□ 1.96
HOXA11-202ENST00000517402 POGZQ7Z3K3 1410 aa27.31■■□□□ 1.96
HOXA11-202ENST00000517402 ST20-MTHFSA0A0A6YYL1 179 aa27.3■■□□□ 1.96
HOXA11-202ENST00000517402 NBPF1Q3BBV0 1214 aa27.28■■□□□ 1.96
HOXA11-202ENST00000517402 CLTCL1P53675 1640 aa27.28■■□□□ 1.96
HOXA11-202ENST00000517402 PRKRIP1Q9H875 184 aaPredicted RBP27.28■■□□□ 1.96
HOXA11-202ENST00000517402 KANK1Q14678 1352 aa27.27■■□□□ 1.96
HOXA11-202ENST00000517402 CEP152O94986 1710 aa27.26■■□□□ 1.95
HOXA11-202ENST00000517402 CCDC184Q52MB2 194 aa27.25■■□□□ 1.95
HOXA11-202ENST00000517402 PTPRTO14522 1441 aa27.24■■□□□ 1.95
HOXA11-202ENST00000517402 HECW2Q9P2P5 1572 aa27.23■■□□□ 1.95
HOXA11-202ENST00000517402 FRMPD1Q5SYB0 1578 aa27.22■■□□□ 1.95
HOXA11-202ENST00000517402 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
HOXA11-202ENST00000517402 ABCA6Q8N139 1617 aa27.2■■□□□ 1.94
HOXA11-202ENST00000517402 ARID4BQ4LE39 1312 aaPredicted RBP27.19■■□□□ 1.94
HOXA11-202ENST00000517402 UGGT1Q9NYU2 1555 aa27.19■■□□□ 1.94
HOXA11-202ENST00000517402 PPRC1Q5VV67 1664 aaKnown RBP27.19■■□□□ 1.94
HOXA11-202ENST00000517402 MLH3Q9UHC1 1453 aa27.19■■□□□ 1.94
HOXA11-202ENST00000517402 EFCAB6Q5THR3 1501 aa27.18■■□□□ 1.94
HOXA11-202ENST00000517402 LAMC1P11047 1609 aa27.18■■□□□ 1.94
HOXA11-202ENST00000517402 CNGB1Q14028 1251 aaPredicted RBP27.18■■□□□ 1.94
HOXA11-202ENST00000517402 MADDQ8WXG6 1647 aa27.17■■□□□ 1.94
HOXA11-202ENST00000517402 RNF17Q9BXT8 1623 aaKnown RBP27.17■■□□□ 1.94
HOXA11-202ENST00000517402 RAPGEF3O95398 923 aa27.17■■□□□ 1.94
HOXA11-202ENST00000517402 NEO1Q92859 1461 aa27.17■■□□□ 1.94
HOXA11-202ENST00000517402 MAP3K4Q9Y6R4 1608 aa27.15■■□□□ 1.94
HOXA11-202ENST00000517402 HNRNPUQ00839 825 aaKnown RBP eCLIP27.1■■□□□ 1.93
HOXA11-202ENST00000517402 MRS2Q9HD23 443 aa27.1■■□□□ 1.93
HOXA11-202ENST00000517402 LMTK2Q8IWU2 1503 aa27.09■■□□□ 1.93
HOXA11-202ENST00000517402 RICTORQ6R327 1708 aa27.09■■□□□ 1.93
HOXA11-202ENST00000517402 GGT6Q6P531 493 aa27.08■■□□□ 1.93
HOXA11-202ENST00000517402 CFAP65Q6ZU64 1925 aaKnown RBP27.06■■□□□ 1.92
HOXA11-202ENST00000517402 DIP2CQ9Y2E4 1556 aa27.06■■□□□ 1.92
HOXA11-202ENST00000517402 MROH2AA6NES4 1674 aa27.06■■□□□ 1.92
HOXA11-202ENST00000517402 SUPT16HQ9Y5B9 1047 aaKnown RBP27.05■■□□□ 1.92
HOXA11-202ENST00000517402 FAM9BQ8IZU0 186 aa27.05■■□□□ 1.92
HOXA11-202ENST00000517402 COL17A1Q9UMD9 1497 aaPredicted RBP27.05■■□□□ 1.92
HOXA11-202ENST00000517402 KIF1BO60333 1816 aa27.05■■□□□ 1.92
HOXA11-202ENST00000517402 DISP3Q9P2K9 1392 aa27.04■■□□□ 1.92
HOXA11-202ENST00000517402 TESK2Q96S53 571 aa27.04■■□□□ 1.92
HOXA11-202ENST00000517402 GLI2P10070 1586 aa27.03■■□□□ 1.92
HOXA11-202ENST00000517402 IQGAP1P46940 1657 aa27.02■■□□□ 1.92
HOXA11-202ENST00000517402 NPATQ14207 1427 aa27.02■■□□□ 1.92
HOXA11-202ENST00000517402 DIP2BQ9P265 1576 aa27■■□□□ 1.91
HOXA11-202ENST00000517402 NEURL4Q96JN8 1562 aa27■■□□□ 1.91
HOXA11-202ENST00000517402 ABCC3O15438 1527 aa26.99■■□□□ 1.91
HOXA11-202ENST00000517402 YEATS2Q9ULM3 1422 aa26.99■■□□□ 1.91
HOXA11-202ENST00000517402 IFT172Q9UG01 1749 aa26.97■■□□□ 1.91
HOXA11-202ENST00000517402 TSPOAP1O95153 1857 aa26.96■■□□□ 1.91
HOXA11-202ENST00000517402 FAM69CQ0P6D2 419 aa26.96■■□□□ 1.91
HOXA11-202ENST00000517402 WASHC2CQ9Y4E1 1318 aa26.96■■□□□ 1.91
HOXA11-202ENST00000517402 CAMSAP1Q5T5Y3 1602 aa26.95■■□□□ 1.91
HOXA11-202ENST00000517402 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
HOXA11-202ENST00000517402 SIGLEC1Q9BZZ2 1709 aa26.93■■□□□ 1.9
HOXA11-202ENST00000517402 MYOM2P54296 1465 aa26.92■■□□□ 1.9
HOXA11-202ENST00000517402 ADGRF5Q8IZF2 1346 aa26.92■■□□□ 1.9
HOXA11-202ENST00000517402 STAC3Q96MF2 364 aa26.92■■□□□ 1.9
HOXA11-202ENST00000517402 SCAF11Q99590 1463 aaKnown RBP26.91■■□□□ 1.9
HOXA11-202ENST00000517402 KIAA1210Q9ULL0 1709 aa26.91■■□□□ 1.9
HOXA11-202ENST00000517402 TMF1P82094 1093 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms