RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
HMBOX1-204ENST00000517386 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
HMBOX1-204ENST00000517386 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
HMBOX1-204ENST00000517386 ATP7AQ04656 1500 aa12.63□□□□□ -0.39
HMBOX1-204ENST00000517386 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
HMBOX1-204ENST00000517386 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
HMBOX1-204ENST00000517386 A2MP01023 1474 aa12.62□□□□□ -0.39
HMBOX1-204ENST00000517386 LHX8Q68G74 356 aa12.62□□□□□ -0.39
HMBOX1-204ENST00000517386 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
HMBOX1-204ENST00000517386 PTPRTO14522 1441 aa12.62□□□□□ -0.39
HMBOX1-204ENST00000517386 CLTCQ00610 1675 aaKnown RBP12.61□□□□□ -0.39
HMBOX1-204ENST00000517386 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
HMBOX1-204ENST00000517386 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
HMBOX1-204ENST00000517386 ZNF335Q9H4Z2 1342 aaPredicted RBP12.61□□□□□ -0.39
HMBOX1-204ENST00000517386 KIAA1107Q9UPP5 1409 aa12.6□□□□□ -0.39
HMBOX1-204ENST00000517386 TIAM1Q13009 1591 aa12.59□□□□□ -0.39
HMBOX1-204ENST00000517386 INO80Q9ULG1 1556 aaPredicted RBP12.59□□□□□ -0.39
HMBOX1-204ENST00000517386 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
HMBOX1-204ENST00000517386 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
HMBOX1-204ENST00000517386 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMBOX1-204ENST00000517386 NPATQ14207 1427 aa12.58□□□□□ -0.4
HMBOX1-204ENST00000517386 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
HMBOX1-204ENST00000517386 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
HMBOX1-204ENST00000517386 CEP162Q5TB80 1403 aa12.57□□□□□ -0.4
HMBOX1-204ENST00000517386 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
HMBOX1-204ENST00000517386 KIF3BO15066 747 aa12.56□□□□□ -0.4
HMBOX1-204ENST00000517386 MBD5Q9P267 1494 aa12.56□□□□□ -0.4
HMBOX1-204ENST00000517386 MROH2AA6NES4 1674 aa12.56□□□□□ -0.4
HMBOX1-204ENST00000517386 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
HMBOX1-204ENST00000517386 MYO3AQ8NEV4 1616 aa12.55□□□□□ -0.4
HMBOX1-204ENST00000517386 EHBP1L1Q8N3D4 1523 aa12.54□□□□□ -0.4
HMBOX1-204ENST00000517386 LOC105371045A0A1W2PR82 267 aa12.54□□□□□ -0.4
HMBOX1-204ENST00000517386 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
HMBOX1-204ENST00000517386 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
HMBOX1-204ENST00000517386 DHX29Q7Z478 1369 aaKnown RBP12.52□□□□□ -0.41
HMBOX1-204ENST00000517386 CAMSAP2Q08AD1 1489 aa12.52□□□□□ -0.41
HMBOX1-204ENST00000517386 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
HMBOX1-204ENST00000517386 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
HMBOX1-204ENST00000517386 PKD2Q13563 968 aa12.51□□□□□ -0.41
HMBOX1-204ENST00000517386 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
HMBOX1-204ENST00000517386 SPATA31D1Q6ZQQ2 1576 aa12.49□□□□□ -0.41
HMBOX1-204ENST00000517386 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
HMBOX1-204ENST00000517386 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
HMBOX1-204ENST00000517386 TNRQ92752 1358 aa12.49□□□□□ -0.41
HMBOX1-204ENST00000517386 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
HMBOX1-204ENST00000517386 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
HMBOX1-204ENST00000517386 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
HMBOX1-204ENST00000517386 RTEL1-TNFRSF6BF6WH68 1400 aa12.48□□□□□ -0.41
HMBOX1-204ENST00000517386 PLA2R1Q13018 1463 aa12.47□□□□□ -0.41
HMBOX1-204ENST00000517386 TSPY4P0CV99 314 aa12.47□□□□□ -0.41
HMBOX1-204ENST00000517386 TSPY10P0CW01 314 aa12.47□□□□□ -0.41
HMBOX1-204ENST00000517386 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
HMBOX1-204ENST00000517386 DNMT1P26358 1616 aaKnown RBP12.47□□□□□ -0.41
HMBOX1-204ENST00000517386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMBOX1-204ENST00000517386 SOCS7O14512 581 aa12.46□□□□□ -0.41
HMBOX1-204ENST00000517386 IQSEC2Q5JU85 1478 aa12.45□□□□□ -0.42
HMBOX1-204ENST00000517386 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
HMBOX1-204ENST00000517386 PZPP20742 1482 aa12.44□□□□□ -0.42
HMBOX1-204ENST00000517386 HSPA1LP34931 641 aa12.43□□□□□ -0.42
HMBOX1-204ENST00000517386 ANKLE2Q86XL3 938 aa12.43□□□□□ -0.42
HMBOX1-204ENST00000517386 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
HMBOX1-204ENST00000517386 LRRC9Q6ZRR7 1453 aa12.42□□□□□ -0.42
HMBOX1-204ENST00000517386 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
HMBOX1-204ENST00000517386 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
HMBOX1-204ENST00000517386 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
HMBOX1-204ENST00000517386 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
HMBOX1-204ENST00000517386 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.43
HMBOX1-204ENST00000517386 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
HMBOX1-204ENST00000517386 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
HMBOX1-204ENST00000517386 NPHP4O75161 1426 aaPredicted RBP12.38□□□□□ -0.43
HMBOX1-204ENST00000517386 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
HMBOX1-204ENST00000517386 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
HMBOX1-204ENST00000517386 ABCC3O15438 1527 aa12.37□□□□□ -0.43
HMBOX1-204ENST00000517386 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
HMBOX1-204ENST00000517386 CFAP65Q6ZU64 1925 aaKnown RBP12.37□□□□□ -0.43
HMBOX1-204ENST00000517386 TOM1O60784 492 aa12.37□□□□□ -0.43
HMBOX1-204ENST00000517386 NLRP1Q9C000 1473 aa12.36□□□□□ -0.43
HMBOX1-204ENST00000517386 MYOM3Q5VTT5 1437 aa12.36□□□□□ -0.43
HMBOX1-204ENST00000517386 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
HMBOX1-204ENST00000517386 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
HMBOX1-204ENST00000517386 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
HMBOX1-204ENST00000517386 CPS1P31327 1500 aa12.34□□□□□ -0.43
HMBOX1-204ENST00000517386 GABBR2O75899 941 aa12.34□□□□□ -0.43
HMBOX1-204ENST00000517386 CEP152O94986 1710 aa12.34□□□□□ -0.43
HMBOX1-204ENST00000517386 RNF17Q9BXT8 1623 aaKnown RBP12.33□□□□□ -0.43
HMBOX1-204ENST00000517386 MROH1Q8NDA8 1641 aa12.33□□□□□ -0.44
HMBOX1-204ENST00000517386 KIF15Q9NS87 1388 aa12.32□□□□□ -0.44
HMBOX1-204ENST00000517386 MAST1Q9Y2H9 1570 aa12.32□□□□□ -0.44
HMBOX1-204ENST00000517386 LTKP29376 864 aa12.32□□□□□ -0.44
HMBOX1-204ENST00000517386 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
HMBOX1-204ENST00000517386 ABCC5O15440 1437 aa12.31□□□□□ -0.44
HMBOX1-204ENST00000517386 TXNDC2Q86VQ3 553 aa12.31□□□□□ -0.44
HMBOX1-204ENST00000517386 MED14O60244 1454 aa12.31□□□□□ -0.44
HMBOX1-204ENST00000517386 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
HMBOX1-204ENST00000517386 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
HMBOX1-204ENST00000517386 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
HMBOX1-204ENST00000517386 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
HMBOX1-204ENST00000517386 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
HMBOX1-204ENST00000517386 DUOX2Q9NRD8 1548 aa12.29□□□□□ -0.44
HMBOX1-204ENST00000517386 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms