RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
CHMP7-203ENST00000517325 HNRNPUQ00839 825 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHMP7-203ENST00000517325 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
CHMP7-203ENST00000517325 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
CHMP7-203ENST00000517325 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
CHMP7-203ENST00000517325 CARD11Q9BXL7 1154 aa23.06■■□□□ 1.28
CHMP7-203ENST00000517325 TRAPPC8Q9Y2L5 1435 aa23.06■■□□□ 1.28
CHMP7-203ENST00000517325 FKBP8Q14318 412 aa23.06■■□□□ 1.28
CHMP7-203ENST00000517325 ERBINQ96RT1 1412 aa23.04■■□□□ 1.28
CHMP7-203ENST00000517325 MAGI2Q86UL8 1455 aa23.03■■□□□ 1.28
CHMP7-203ENST00000517325 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
CHMP7-203ENST00000517325 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
CHMP7-203ENST00000517325 ARID4BQ4LE39 1312 aaPredicted RBP23■■□□□ 1.27
CHMP7-203ENST00000517325 MRS2Q9HD23 443 aa23■■□□□ 1.27
CHMP7-203ENST00000517325 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
CHMP7-203ENST00000517325 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
CHMP7-203ENST00000517325 WDR7Q9Y4E6 1490 aa22.98■■□□□ 1.27
CHMP7-203ENST00000517325 ROCK2O75116 1388 aaKnown RBP22.97■■□□□ 1.27
CHMP7-203ENST00000517325 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
CHMP7-203ENST00000517325 RGL3Q3MIN7 710 aa22.97■■□□□ 1.27
CHMP7-203ENST00000517325 A2MP01023 1474 aa22.96■■□□□ 1.27
CHMP7-203ENST00000517325 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
CHMP7-203ENST00000517325 NEFLP07196 543 aa22.95■■□□□ 1.27
CHMP7-203ENST00000517325 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.27
CHMP7-203ENST00000517325 AFAP1Q8N556 730 aa22.95■■□□□ 1.26
CHMP7-203ENST00000517325 ATP10AO60312 1499 aa22.94■■□□□ 1.26
CHMP7-203ENST00000517325 ZFYVE16Q7Z3T8 1539 aa22.94■■□□□ 1.26
CHMP7-203ENST00000517325 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
CHMP7-203ENST00000517325 RTEL1-TNFRSF6BF6WH68 1400 aa22.92■■□□□ 1.26
CHMP7-203ENST00000517325 CNGB1Q14028 1251 aaPredicted RBP22.9■■□□□ 1.26
CHMP7-203ENST00000517325 RBM19Q9Y4C8 960 aaKnown RBP22.9■■□□□ 1.26
CHMP7-203ENST00000517325 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
CHMP7-203ENST00000517325 NBPF1Q3BBV0 1214 aa22.89■■□□□ 1.26
CHMP7-203ENST00000517325 FANCAO15360 1455 aa22.89■■□□□ 1.25
CHMP7-203ENST00000517325 GPRASP1Q5JY77 1395 aa22.87■■□□□ 1.25
CHMP7-203ENST00000517325 E9PCH4 1651 aa22.85■■□□□ 1.25
CHMP7-203ENST00000517325 ASXL2Q76L83 1435 aa22.84■■□□□ 1.25
CHMP7-203ENST00000517325 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
CHMP7-203ENST00000517325 ATP7AQ04656 1500 aa22.83■■□□□ 1.25
CHMP7-203ENST00000517325 ZBED9Q6R2W3 1325 aa22.83■■□□□ 1.24
CHMP7-203ENST00000517325 DEPDC5O75140 1603 aa22.82■■□□□ 1.24
CHMP7-203ENST00000517325 LAMC1P11047 1609 aa22.82■■□□□ 1.24
CHMP7-203ENST00000517325 PRDM15P57071 1507 aaPredicted RBP22.82■■□□□ 1.24
CHMP7-203ENST00000517325 EIF2AK4Q9P2K8 1649 aaKnown RBP22.81■■□□□ 1.24
CHMP7-203ENST00000517325 ADGRL1O94910 1474 aa22.81■■□□□ 1.24
CHMP7-203ENST00000517325 SCAPERQ9BY12 1400 aa22.8■■□□□ 1.24
CHMP7-203ENST00000517325 TRPM2O94759 1503 aa22.78■■□□□ 1.24
CHMP7-203ENST00000517325 PTPRTO14522 1441 aa22.75■■□□□ 1.23
CHMP7-203ENST00000517325 SPHKAPQ2M3C7 1700 aa22.75■■□□□ 1.23
CHMP7-203ENST00000517325 TESK2Q96S53 571 aa22.75■■□□□ 1.23
CHMP7-203ENST00000517325 COL17A1Q9UMD9 1497 aaPredicted RBP22.74■■□□□ 1.23
CHMP7-203ENST00000517325 VWDEQ8N2E2 1590 aa22.74■■□□□ 1.23
CHMP7-203ENST00000517325 TET3O43151 1660 aa22.74■■□□□ 1.23
CHMP7-203ENST00000517325 RNF17Q9BXT8 1623 aaKnown RBP22.74■■□□□ 1.23
CHMP7-203ENST00000517325 MSH5O43196 834 aa22.73■■□□□ 1.23
CHMP7-203ENST00000517325 IRX6P78412 446 aaPredicted RBP22.73■■□□□ 1.23
CHMP7-203ENST00000517325 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
CHMP7-203ENST00000517325 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
CHMP7-203ENST00000517325 CLTCL1P53675 1640 aa22.72■■□□□ 1.23
CHMP7-203ENST00000517325 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
CHMP7-203ENST00000517325 KIF3BO15066 747 aa22.72■■□□□ 1.23
CHMP7-203ENST00000517325 CEP152O94986 1710 aa22.71■■□□□ 1.23
CHMP7-203ENST00000517325 MADDQ8WXG6 1647 aa22.71■■□□□ 1.23
CHMP7-203ENST00000517325 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
CHMP7-203ENST00000517325 KANK1Q14678 1352 aa22.7■■□□□ 1.23
CHMP7-203ENST00000517325 MROH1Q8NDA8 1641 aa22.7■■□□□ 1.22
CHMP7-203ENST00000517325 KTN1Q86UP2 1357 aaKnown RBP22.7■■□□□ 1.22
CHMP7-203ENST00000517325 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
CHMP7-203ENST00000517325 RALBP1Q15311 655 aa22.68■■□□□ 1.22
CHMP7-203ENST00000517325 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
CHMP7-203ENST00000517325 KIDINS220Q9ULH0 1771 aa22.67■■□□□ 1.22
CHMP7-203ENST00000517325 BRD4O60885 1362 aaPredicted RBP22.65■■□□□ 1.22
CHMP7-203ENST00000517325 PER1O15534 1290 aaPredicted RBP22.65■■□□□ 1.22
CHMP7-203ENST00000517325 NPM1P06748 294 aaKnown RBP eCLIP22.65■■□□□ 1.22
CHMP7-203ENST00000517325 ZNF518AQ6AHZ1 1483 aa22.64■■□□□ 1.21
CHMP7-203ENST00000517325 PARD3Q8TEW0 1356 aa22.64■■□□□ 1.21
CHMP7-203ENST00000517325 TMF1P82094 1093 aa22.62■■□□□ 1.21
CHMP7-203ENST00000517325 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
CHMP7-203ENST00000517325 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
CHMP7-203ENST00000517325 CD109Q6YHK3 1445 aa22.6■■□□□ 1.21
CHMP7-203ENST00000517325 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
CHMP7-203ENST00000517325 UGGT1Q9NYU2 1555 aa22.6■■□□□ 1.21
CHMP7-203ENST00000517325 SENP3-EIF4A1A0A087X0R7 540 aa22.6■■□□□ 1.21
CHMP7-203ENST00000517325 EFCAB6Q5THR3 1501 aa22.59■■□□□ 1.21
CHMP7-203ENST00000517325 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
CHMP7-203ENST00000517325 PANK3Q9H999 370 aa22.58■■□□□ 1.21
CHMP7-203ENST00000517325 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
CHMP7-203ENST00000517325 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
CHMP7-203ENST00000517325 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
CHMP7-203ENST00000517325 ERICH6BQ5W0A0 696 aa22.57■■□□□ 1.2
CHMP7-203ENST00000517325 NEURL4Q96JN8 1562 aa22.57■■□□□ 1.2
CHMP7-203ENST00000517325 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
CHMP7-203ENST00000517325 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
CHMP7-203ENST00000517325 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
CHMP7-203ENST00000517325 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
CHMP7-203ENST00000517325 CC2D1BQ5T0F9 858 aaKnown RBP22.54■■□□□ 1.2
CHMP7-203ENST00000517325 LMTK2Q8IWU2 1503 aa22.53■■□□□ 1.2
CHMP7-203ENST00000517325 FRMPD1Q5SYB0 1578 aa22.53■■□□□ 1.2
CHMP7-203ENST00000517325 MLH3Q9UHC1 1453 aa22.51■■□□□ 1.19
CHMP7-203ENST00000517325 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms