RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 TMEM92Q6UXU6 159 aa1.15□□□□□ -2.23
RNU6-1238P-201ENST00000517215 LSRQ86X29 649 aaPredicted RBP1.15□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ADAMTS8Q9UP79 889 aa1.15□□□□□ -2.23
RNU6-1238P-201ENST00000517215 AXIN1O15169 862 aa1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 TXKP42681 527 aa1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 GOLGA2Q08379 1002 aa1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 KANK3Q6NY19 840 aa1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 MRPL50Q8N5N7 158 aaKnown RBP1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 GALNT6Q8NCL4 622 aa1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 NXF1Q9UBU9 619 aaKnown RBP1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ERBB4Q15303 1308 aa1.14□□□□□ -2.23
RNU6-1238P-201ENST00000517215 PROCP04070 461 aa1.13□□□□□ -2.23
RNU6-1238P-201ENST00000517215 PLA2G4EQ3MJ16 856 aa1.13□□□□□ -2.23
RNU6-1238P-201ENST00000517215 NPAS3Q8IXF0 933 aa1.13□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ITGB2P05107 769 aa1.12□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ATXN8OSP0DMR3 200 aa1.12□□□□□ -2.23
RNU6-1238P-201ENST00000517215 TRIM47Q96LD4 638 aa1.12□□□□□ -2.23
RNU6-1238P-201ENST00000517215 SLC4A5Q9BY07 1137 aa1.12□□□□□ -2.23
RNU6-1238P-201ENST00000517215 H3BM21 787 aa1.11□□□□□ -2.23
RNU6-1238P-201ENST00000517215 TNFRSF10AO00220 468 aa1.11□□□□□ -2.23
RNU6-1238P-201ENST00000517215 AVPP01185 164 aa1.11□□□□□ -2.23
RNU6-1238P-201ENST00000517215 FURINP09958 794 aa1.11□□□□□ -2.23
RNU6-1238P-201ENST00000517215 VEGFBP49765 207 aa1.11□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ZMYM1Q5SVZ6 1142 aa1.11□□□□□ -2.23
RNU6-1238P-201ENST00000517215 GDF9O60383 454 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 COL9A1P20849 921 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 BAG6P46379 1132 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 BCAMP50895 628 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 CTC1Q2NKJ3 1217 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ZNF598Q86UK7 904 aaKnown RBP1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ANKK1Q8NFD2 765 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 KCNH8Q96L42 1107 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 KCNK17Q96T54 332 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 SENP2Q9HC62 589 aa1.1□□□□□ -2.23
RNU6-1238P-201ENST00000517215 PSPNO60542 156 aa1.09□□□□□ -2.23
RNU6-1238P-201ENST00000517215 SLC19A1P41440 591 aa1.09□□□□□ -2.23
RNU6-1238P-201ENST00000517215 SMCPP49901 116 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1238P-201ENST00000517215 SPRYD7Q5W111 196 aa1.09□□□□□ -2.23
RNU6-1238P-201ENST00000517215 NBPF11Q86T75 865 aa1.09□□□□□ -2.23
RNU6-1238P-201ENST00000517215 ATP13A2Q9NQ11 1180 aa1.09□□□□□ -2.23
RNU6-1238P-201ENST00000517215 SCO2A0A1W2PP80 73 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 SOWAHBA6NEL2 793 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 PAX4O43316 350 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 TJAP1Q5JTD0 557 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 FMNL2Q96PY5 1086 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 NBPF3Q9H094 633 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 WDR26Q9H7D7 661 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ZFP64Q9NPA5 681 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 PCDHB8Q9UN66 801 aa1.08□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ITGB7P26010 798 aa1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 PPP4R3BQ5MIZ7 849 aa1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 EMID1Q96A84 441 aaPredicted RBP1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 KIFC2Q96AC6 838 aa1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 SCARF2Q96GP6 870 aaPredicted RBP1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 FOXD4L1Q9NU39 408 aa1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 PCDHGA4Q9Y5G9 962 aa1.07□□□□□ -2.24
RNU6-1238P-201ENST00000517215 GGCXP38435 758 aa1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 MARSP56192 900 aaKnown RBP1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 JAG1P78504 1218 aa1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ARTNQ5T4W7 220 aa1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ZNF697Q5TEC3 545 aa1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 MCTP1Q6DN14 999 aa1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 DCAF5Q96JK2 942 aa1.06□□□□□ -2.24
RNU6-1238P-201ENST00000517215 KRTAP9-7A8MTY7 169 aa1.05□□□□□ -2.24
RNU6-1238P-201ENST00000517215 SLC34A2O95436 690 aa1.05□□□□□ -2.24
RNU6-1238P-201ENST00000517215 VSIG8P0DPA2 414 aa1.05□□□□□ -2.24
RNU6-1238P-201ENST00000517215 MICALL2Q8IY33 904 aa1.05□□□□□ -2.24
RNU6-1238P-201ENST00000517215 TMUB1Q9BVT8 246 aa1.05□□□□□ -2.24
RNU6-1238P-201ENST00000517215 AVENQ9NQS1 362 aaPredicted RBP1.05□□□□□ -2.24
RNU6-1238P-201ENST00000517215 KRTAP5-9P26371 169 aa1.04□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ZBED2Q9BTP6 218 aa1.04□□□□□ -2.24
RNU6-1238P-201ENST00000517215 IL21Q9HBE4 155 aa1.04□□□□□ -2.24
RNU6-1238P-201ENST00000517215 KDM4FA0A1W2PPD8 638 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 PLEKHG5O94827 1062 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ARHGEF15O94989 841 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 FOXD4L6Q3SYB3 417 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ZNF385CQ66K41 422 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 LMOD2Q6P5Q4 547 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 FOXD4L3Q6VB84 417 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 SVOPQ8N4V2 548 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 NKX2-3Q8TAU0 364 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 ZNF516Q92618 1163 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 FAM212AQ96EL1 285 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 KRTAP9-3Q9BYQ3 159 aa1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 TSR3Q9UJK0 312 aaKnown RBP1.03□□□□□ -2.24
RNU6-1238P-201ENST00000517215 LIAT1Q6ZQX7 453 aa1.02□□□□□ -2.25
RNU6-1238P-201ENST00000517215 MTRQ99707 1265 aa1.02□□□□□ -2.25
RNU6-1238P-201ENST00000517215 COL17A1Q9UMD9 1497 aaPredicted RBP1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 NUBP1P53384 320 aa1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 ZNF467Q7Z7K2 595 aaPredicted RBP1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 LAPTM4BQ86VI4 370 aa1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 SEMA6BQ9H3T3 888 aa1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 TOR4AQ9NXH8 423 aa1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 PKD2L1Q9P0L9 805 aa1.01□□□□□ -2.25
RNU6-1238P-201ENST00000517215 RNF223E7ERA6 249 aa1□□□□□ -2.25
RNU6-1238P-201ENST00000517215 PYGBP11216 843 aa1□□□□□ -2.25
RNU6-1238P-201ENST00000517215 FOXC1Q12948 553 aa1□□□□□ -2.25
RNU6-1238P-201ENST00000517215 ZFRQ96KR1 1074 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms