RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
SCARNA16.5-201ENST00000517114 DPYSL4O14531 572 aa1.9□□□□□ -2.11
SCARNA16.5-201ENST00000517114 TYW1BQ6NUM6 668 aa1.9□□□□□ -2.11
SCARNA16.5-201ENST00000517114 ANKK1Q8NFD2 765 aa1.9□□□□□ -2.11
SCARNA16.5-201ENST00000517114 RBM33Q96EV2 1170 aaKnown RBP1.9□□□□□ -2.11
SCARNA16.5-201ENST00000517114 PHF14O94880 888 aa1.89□□□□□ -2.11
SCARNA16.5-201ENST00000517114 DDX12PQ92771 950 aa1.89□□□□□ -2.11
SCARNA16.5-201ENST00000517114 IRX2Q9BZI1 471 aaPredicted RBP1.89□□□□□ -2.11
SCARNA16.5-201ENST00000517114 WBP1LQ9NX94 342 aa1.89□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KIAA1468Q9P260 1216 aa1.89□□□□□ -2.11
SCARNA16.5-201ENST00000517114 RABGEF1Q9UJ41 708 aa1.89□□□□□ -2.11
SCARNA16.5-201ENST00000517114 SOWAHBA6NEL2 793 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 TRIM6-TRIM34B2RNG4 842 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 LCE2BO14633 110 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 ITGBL1O95965 494 aaPredicted RBP1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 PRIM1P49642 420 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 CAMK2BQ13554 666 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 TSR1Q2NL82 804 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 C6orf132Q5T0Z8 1188 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 IFFO2Q5TF58 517 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 FBXW7Q969H0 707 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 ZFRQ96KR1 1074 aaKnown RBP1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 HPS5Q9UPZ3 1129 aa1.88□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KRTAP9-6A0A140TA67 174 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 C3orf80F5H4A9 247 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 SMAPO00193 183 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 MAP3K7O43318 606 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 EN1Q05925 392 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 NBR1Q14596 966 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 PDIA6Q15084 440 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 FAM98CQ17RN3 349 aaKnown RBP1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 EPAS1Q99814 870 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KRTAP17-1Q9BYP8 105 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KRTAP9-2Q9BYQ4 174 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KRTAP4-8Q9BYQ9 185 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 FAM198AQ9UFP1 575 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 TSKSQ9UJT2 592 aa1.87□□□□□ -2.11
SCARNA16.5-201ENST00000517114 RGS20O76081 388 aa1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KCNC4Q03721 635 aa1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 Q6ZNB5 142 aa1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 LAPTM4BQ86VI4 370 aa1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 LRCH3Q96II8 777 aa1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 CDHR5Q9HBB8 845 aa1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 TSR3Q9UJK0 312 aaKnown RBP1.86□□□□□ -2.11
SCARNA16.5-201ENST00000517114 GRXCR2A6NFK2 248 aa1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 RNF40O75150 1001 aa1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 SUZ12Q15022 739 aaKnown RBP1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 NYAP1Q6ZVC0 841 aa1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 SAMD7Q7Z3H4 446 aa1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 KRTAP1-3Q8IUG1 177 aa1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 CDCA7LQ96GN5 454 aa1.85□□□□□ -2.11
SCARNA16.5-201ENST00000517114 NBPF26B4DH59 902 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 ONECUT3O60422 494 aaPredicted RBP1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 APLP1P51693 650 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 PRSS12P56730 875 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 TJAP1Q5JTD0 557 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 PACS2Q86VP3 889 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 BBXQ8WY36 941 aaPredicted RBP1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 ZNF516Q92618 1163 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 MTRQ99707 1265 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 PNMA3Q9UL41 463 aa1.84□□□□□ -2.11
SCARNA16.5-201ENST00000517114 SPDYE16A6NNV3 312 aaPredicted RBP1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 GFRA3O60609 400 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 OSBPP22059 807 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 PPP4CP60510 307 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 COPS2P61201 443 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 E2F4Q16254 413 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 PADI6Q6TGC4 694 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 NUDT18Q6ZVK8 323 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 SPRYD3Q8NCJ5 442 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 TATDN2Q93075 761 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 ZNF775Q96BV0 537 aaPredicted RBP1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 CFAP44Q96MT7 982 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 PRKD2Q9BZL6 878 aa1.83□□□□□ -2.12
SCARNA16.5-201ENST00000517114 TLL1O43897 1013 aa1.82□□□□□ -2.12
SCARNA16.5-201ENST00000517114 SWT1Q5T5J6 900 aaKnown RBP1.82□□□□□ -2.12
SCARNA16.5-201ENST00000517114 PPP1R18Q6NYC8 613 aa1.82□□□□□ -2.12
SCARNA16.5-201ENST00000517114 PAXIP1Q6ZW49 1069 aaPredicted RBP1.82□□□□□ -2.12
SCARNA16.5-201ENST00000517114 NKX2-3Q8TAU0 364 aa1.82□□□□□ -2.12
SCARNA16.5-201ENST00000517114 IL21Q9HBE4 155 aa1.82□□□□□ -2.12
SCARNA16.5-201ENST00000517114 MLLT3P42568 568 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 TTC13Q8NBP0 860 aa1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 CERKQ8TCT0 537 aa1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 RTN4Q9NQC3 1192 aaKnown RBP1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 NPDC1Q9NQX5 325 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 WDR70Q9NW82 654 aa1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 RBM27Q9P2N5 1060 aaKnown RBP1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 ARIH1Q9Y4X5 557 aaPredicted RBP1.81□□□□□ -2.12
SCARNA16.5-201ENST00000517114 NRG2O14511 850 aaPredicted RBP1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 LAPTM4AQ15012 233 aa1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 FAM161AQ3B820 660 aa1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 TRAF7Q6Q0C0 670 aa1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 BLOC1S3Q6QNY0 202 aa1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 SLF2Q8IX21 1173 aa1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 KCNV2Q8TDN2 545 aa1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 EMID1Q96A84 441 aaPredicted RBP1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.8□□□□□ -2.12
SCARNA16.5-201ENST00000517114 PDZRN3Q9UPQ7 1066 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms