RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 GOLGA8CPA6NN73 597 aa7.93□□□□□ -1.14
RNU6-1088P-201ENST00000516850 PPP1R3GB7ZBB8 358 aa7.93□□□□□ -1.14
RNU6-1088P-201ENST00000516850 NBR1Q14596 966 aa7.92□□□□□ -1.14
RNU6-1088P-201ENST00000516850 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
RNU6-1088P-201ENST00000516850 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
RNU6-1088P-201ENST00000516850 ARIH1Q9Y4X5 557 aaPredicted RBP7.92□□□□□ -1.14
RNU6-1088P-201ENST00000516850 C6orf132Q5T0Z8 1188 aa7.91□□□□□ -1.14
RNU6-1088P-201ENST00000516850 MRPL50Q8N5N7 158 aaKnown RBP7.91□□□□□ -1.14
RNU6-1088P-201ENST00000516850 NBPF3Q9H094 633 aa7.91□□□□□ -1.14
RNU6-1088P-201ENST00000516850 GRXCR2A6NFK2 248 aa7.9□□□□□ -1.14
RNU6-1088P-201ENST00000516850 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
RNU6-1088P-201ENST00000516850 KCTD12Q96CX2 325 aaKnown RBP7.9□□□□□ -1.14
RNU6-1088P-201ENST00000516850 HCSTQ9UBK5 93 aa7.9□□□□□ -1.14
RNU6-1088P-201ENST00000516850 MAP3K7O43318 606 aa7.89□□□□□ -1.15
RNU6-1088P-201ENST00000516850 BHMG1C9JSJ3 638 aaPredicted RBP7.87□□□□□ -1.15
RNU6-1088P-201ENST00000516850 COL9A1P20849 921 aa7.87□□□□□ -1.15
RNU6-1088P-201ENST00000516850 EN1Q05925 392 aaPredicted RBP7.87□□□□□ -1.15
RNU6-1088P-201ENST00000516850 RABGEF1Q9UJ41 708 aa7.87□□□□□ -1.15
RNU6-1088P-201ENST00000516850 P3H3Q8IVL6 736 aa7.86□□□□□ -1.15
RNU6-1088P-201ENST00000516850 ARHGEF1Q92888 912 aaKnown RBP7.86□□□□□ -1.15
RNU6-1088P-201ENST00000516850 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
RNU6-1088P-201ENST00000516850 PROX2Q3B8N5 592 aa7.85□□□□□ -1.15
RNU6-1088P-201ENST00000516850 WNT2BQ93097 391 aa7.85□□□□□ -1.15
RNU6-1088P-201ENST00000516850 HAP1P54257 671 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1088P-201ENST00000516850 PTPN5P54829 565 aa7.83□□□□□ -1.16
RNU6-1088P-201ENST00000516850 CERKQ8TCT0 537 aa7.83□□□□□ -1.16
RNU6-1088P-201ENST00000516850 KIAA1468Q9P260 1216 aa7.83□□□□□ -1.16
RNU6-1088P-201ENST00000516850 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
RNU6-1088P-201ENST00000516850 TSR1Q2NL82 804 aaKnown RBP7.82□□□□□ -1.16
RNU6-1088P-201ENST00000516850 PACS2Q86VP3 889 aa7.82□□□□□ -1.16
RNU6-1088P-201ENST00000516850 KCNV2Q8TDN2 545 aa7.82□□□□□ -1.16
RNU6-1088P-201ENST00000516850 LAPTM4BQ86VI4 370 aa7.81□□□□□ -1.16
RNU6-1088P-201ENST00000516850 ANKK1Q8NFD2 765 aa7.81□□□□□ -1.16
RNU6-1088P-201ENST00000516850 OSBPP22059 807 aa7.8□□□□□ -1.16
RNU6-1088P-201ENST00000516850 THSD4Q6ZMP0 1018 aa7.79□□□□□ -1.16
RNU6-1088P-201ENST00000516850 CDCA7LQ96GN5 454 aa7.78□□□□□ -1.16
RNU6-1088P-201ENST00000516850 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
RNU6-1088P-201ENST00000516850 PRSS12P56730 875 aa7.77□□□□□ -1.17
RNU6-1088P-201ENST00000516850 ZFRQ96KR1 1074 aaKnown RBP7.77□□□□□ -1.17
RNU6-1088P-201ENST00000516850 SEPT9Q9UHD8 586 aaPredicted RBP7.77□□□□□ -1.17
RNU6-1088P-201ENST00000516850 FAM98CQ17RN3 349 aaKnown RBP7.76□□□□□ -1.17
RNU6-1088P-201ENST00000516850 TSKSQ9UJT2 592 aa7.76□□□□□ -1.17
RNU6-1088P-201ENST00000516850 NBPF26B4DH59 902 aa7.74□□□□□ -1.17
RNU6-1088P-201ENST00000516850 MLLT3P42568 568 aaPredicted RBP7.74□□□□□ -1.17
RNU6-1088P-201ENST00000516850 PRIM1P49642 420 aaKnown RBP7.74□□□□□ -1.17
RNU6-1088P-201ENST00000516850 HDGFP51858 240 aaKnown RBP7.74□□□□□ -1.17
RNU6-1088P-201ENST00000516850 SOWAHBA6NEL2 793 aa7.73□□□□□ -1.17
RNU6-1088P-201ENST00000516850 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
RNU6-1088P-201ENST00000516850 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
RNU6-1088P-201ENST00000516850 PNMA3Q9UL41 463 aa7.73□□□□□ -1.17
RNU6-1088P-201ENST00000516850 BCAMP50895 628 aa7.72□□□□□ -1.17
RNU6-1088P-201ENST00000516850 SMYD5Q6GMV2 418 aa7.72□□□□□ -1.17
RNU6-1088P-201ENST00000516850 TATDN2Q93075 761 aa7.72□□□□□ -1.17
RNU6-1088P-201ENST00000516850 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1088P-201ENST00000516850 RBM27Q9P2N5 1060 aaKnown RBP7.72□□□□□ -1.17
RNU6-1088P-201ENST00000516850 NUTM2FA1L443 756 aa7.7□□□□□ -1.18
RNU6-1088P-201ENST00000516850 SMAPO00193 183 aa7.7□□□□□ -1.18
RNU6-1088P-201ENST00000516850 SEMA3EO15041 775 aa7.7□□□□□ -1.18
RNU6-1088P-201ENST00000516850 NYAP1Q6ZVC0 841 aa7.7□□□□□ -1.18
RNU6-1088P-201ENST00000516850 NUDT18Q6ZVK8 323 aa7.69□□□□□ -1.18
RNU6-1088P-201ENST00000516850 PPP4CP60510 307 aa7.68□□□□□ -1.18
RNU6-1088P-201ENST00000516850 PADI6Q6TGC4 694 aa7.68□□□□□ -1.18
RNU6-1088P-201ENST00000516850 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
RNU6-1088P-201ENST00000516850 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
RNU6-1088P-201ENST00000516850 HPS5Q9UPZ3 1129 aa7.68□□□□□ -1.18
RNU6-1088P-201ENST00000516850 SLC4A3P48751 1232 aa7.67□□□□□ -1.18
RNU6-1088P-201ENST00000516850 NPDC1Q9NQX5 325 aaPredicted RBP7.67□□□□□ -1.18
RNU6-1088P-201ENST00000516850 FAM198AQ9UFP1 575 aa7.67□□□□□ -1.18
RNU6-1088P-201ENST00000516850 SAMD7Q7Z3H4 446 aa7.66□□□□□ -1.18
RNU6-1088P-201ENST00000516850 WBP1LQ9NX94 342 aa7.66□□□□□ -1.18
RNU6-1088P-201ENST00000516850 RNF40O75150 1001 aa7.65□□□□□ -1.18
RNU6-1088P-201ENST00000516850 PTGDRQ13258 359 aa7.65□□□□□ -1.18
RNU6-1088P-201ENST00000516850 FCHSD2O94868 740 aa7.64□□□□□ -1.19
RNU6-1088P-201ENST00000516850 NECTIN2Q92692 538 aa7.64□□□□□ -1.19
RNU6-1088P-201ENST00000516850 KDM2AQ9Y2K7 1162 aa7.64□□□□□ -1.19
RNU6-1088P-201ENST00000516850 TESPA1A2RU30 521 aaPredicted RBP7.63□□□□□ -1.19
RNU6-1088P-201ENST00000516850 IFFO2Q5TF58 517 aa7.63□□□□□ -1.19
RNU6-1088P-201ENST00000516850 TTC13Q8NBP0 860 aa7.63□□□□□ -1.19
RNU6-1088P-201ENST00000516850 RBM46Q8TBY0 533 aaKnown RBP7.62□□□□□ -1.19
RNU6-1088P-201ENST00000516850 C3orf80F5H4A9 247 aa7.61□□□□□ -1.19
RNU6-1088P-201ENST00000516850 TULP1O00294 542 aaPredicted RBP7.61□□□□□ -1.19
RNU6-1088P-201ENST00000516850 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
RNU6-1088P-201ENST00000516850 KCNC4Q03721 635 aa7.6□□□□□ -1.19
RNU6-1088P-201ENST00000516850 SWT1Q5T5J6 900 aaKnown RBP7.6□□□□□ -1.19
RNU6-1088P-201ENST00000516850 ITGBL1O95965 494 aaPredicted RBP7.59□□□□□ -1.19
RNU6-1088P-201ENST00000516850 RBM26Q5T8P6 1007 aaKnown RBP7.59□□□□□ -1.19
RNU6-1088P-201ENST00000516850 EYA1Q99502 592 aa7.59□□□□□ -1.19
RNU6-1088P-201ENST00000516850 DNAJB2P25686 324 aa7.58□□□□□ -1.2
RNU6-1088P-201ENST00000516850 HIC1Q14526 733 aa7.58□□□□□ -1.2
RNU6-1088P-201ENST00000516850 OATP04181 439 aa7.56□□□□□ -1.2
RNU6-1088P-201ENST00000516850 ADGRG1Q9Y653 693 aa7.56□□□□□ -1.2
RNU6-1088P-201ENST00000516850 A0A0G2JS52 829 aa7.55□□□□□ -1.2
RNU6-1088P-201ENST00000516850 RGS20O76081 388 aa7.55□□□□□ -1.2
RNU6-1088P-201ENST00000516850 PRR14Q9BWN1 585 aa7.55□□□□□ -1.2
RNU6-1088P-201ENST00000516850 RCCD1A6NED2 376 aa7.54□□□□□ -1.2
RNU6-1088P-201ENST00000516850 GNPATO15228 680 aa7.54□□□□□ -1.2
RNU6-1088P-201ENST00000516850 GPIHBP1Q8IV16 184 aa7.54□□□□□ -1.2
RNU6-1088P-201ENST00000516850 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.53□□□□□ -1.2
RNU6-1088P-201ENST00000516850 FAM161AQ3B820 660 aa7.53□□□□□ -1.2
RNU6-1088P-201ENST00000516850 IL21Q9HBE4 155 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms