RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MLLT1Q03111 559 aaPredicted RBP6.62□□□□□ -1.35
SCARNA13-201ENST00000516672 HECW1Q76N89 1606 aa6.61□□□□□ -1.35
SCARNA13-201ENST00000516672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.61□□□□□ -1.35
SCARNA13-201ENST00000516672 DLL1O00548 723 aa6.61□□□□□ -1.35
SCARNA13-201ENST00000516672 SHANK3Q9BYB0 1731 aa6.6□□□□□ -1.35
SCARNA13-201ENST00000516672 APLP1P51693 650 aa6.6□□□□□ -1.35
SCARNA13-201ENST00000516672 C8orf37Q96NL8 207 aa6.6□□□□□ -1.35
SCARNA13-201ENST00000516672 SHPRHQ149N8 1683 aa6.6□□□□□ -1.35
SCARNA13-201ENST00000516672 XIRP1Q702N8 1843 aaKnown RBP6.6□□□□□ -1.35
SCARNA13-201ENST00000516672 KIAA1210Q9ULL0 1709 aa6.59□□□□□ -1.35
SCARNA13-201ENST00000516672 JMYQ8N9B5 988 aa6.58□□□□□ -1.36
SCARNA13-201ENST00000516672 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
SCARNA13-201ENST00000516672 ADGBQ8N7X0 1667 aa6.57□□□□□ -1.36
SCARNA13-201ENST00000516672 NPHP4O75161 1426 aaPredicted RBP6.57□□□□□ -1.36
SCARNA13-201ENST00000516672 LRRC9Q6ZRR7 1453 aa6.56□□□□□ -1.36
SCARNA13-201ENST00000516672 BAG6P46379 1132 aa6.56□□□□□ -1.36
SCARNA13-201ENST00000516672 DNMT1P26358 1616 aaKnown RBP6.56□□□□□ -1.36
SCARNA13-201ENST00000516672 CNTLNQ9NXG0 1405 aa6.56□□□□□ -1.36
SCARNA13-201ENST00000516672 SPON1Q9HCB6 807 aa6.55□□□□□ -1.36
SCARNA13-201ENST00000516672 ANKLE2Q86XL3 938 aa6.54□□□□□ -1.36
SCARNA13-201ENST00000516672 KLRG1Q96E93 195 aa6.54□□□□□ -1.36
SCARNA13-201ENST00000516672 TRPC5Q9UL62 973 aaPredicted RBP6.53□□□□□ -1.36
SCARNA13-201ENST00000516672 A2ML1A8K2U0 1454 aa6.53□□□□□ -1.36
SCARNA13-201ENST00000516672 MED14O60244 1454 aa6.53□□□□□ -1.36
SCARNA13-201ENST00000516672 RALGAPBQ86X10 1494 aa6.53□□□□□ -1.36
SCARNA13-201ENST00000516672 UNC13BO14795 1591 aa6.52□□□□□ -1.36
SCARNA13-201ENST00000516672 AGLP35573 1532 aa6.52□□□□□ -1.37
SCARNA13-201ENST00000516672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCARNA13-201ENST00000516672 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
SCARNA13-201ENST00000516672 ATP10BO94823 1461 aa6.52□□□□□ -1.37
SCARNA13-201ENST00000516672 IQGAP1P46940 1657 aa6.52□□□□□ -1.37
SCARNA13-201ENST00000516672 USP19O94966 1318 aa6.51□□□□□ -1.37
SCARNA13-201ENST00000516672 DISP1Q96F81 1524 aa6.51□□□□□ -1.37
SCARNA13-201ENST00000516672 KDM5DQ9BY66 1539 aa6.51□□□□□ -1.37
SCARNA13-201ENST00000516672 KCNQ2O43526 872 aa6.51□□□□□ -1.37
SCARNA13-201ENST00000516672 EN1Q05925 392 aaPredicted RBP6.51□□□□□ -1.37
SCARNA13-201ENST00000516672 MROH2AA6NES4 1674 aa6.5□□□□□ -1.37
SCARNA13-201ENST00000516672 HSPA1AP0DMV8 641 aaKnown RBP6.5□□□□□ -1.37
SCARNA13-201ENST00000516672 HSPA1BP0DMV9 641 aaKnown RBP6.5□□□□□ -1.37
SCARNA13-201ENST00000516672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.5□□□□□ -1.37
SCARNA13-201ENST00000516672 USP21Q9UK80 565 aa6.5□□□□□ -1.37
SCARNA13-201ENST00000516672 RGS19P49795 217 aa6.49□□□□□ -1.37
SCARNA13-201ENST00000516672 SLAIN2Q9P270 581 aa6.49□□□□□ -1.37
SCARNA13-201ENST00000516672 ATRNO75882 1429 aa6.49□□□□□ -1.37
SCARNA13-201ENST00000516672 GPBP1L1Q9HC44 474 aaPredicted RBP6.48□□□□□ -1.37
SCARNA13-201ENST00000516672 DEPDC5O75140 1603 aa6.47□□□□□ -1.37
SCARNA13-201ENST00000516672 PCNTO95613 3336 aa6.47□□□□□ -1.37
SCARNA13-201ENST00000516672 TMEM94Q12767 1356 aa6.47□□□□□ -1.37
SCARNA13-201ENST00000516672 ATP10DQ9P241 1426 aa6.47□□□□□ -1.37
SCARNA13-201ENST00000516672 DIP2AQ14689 1571 aa6.47□□□□□ -1.37
SCARNA13-201ENST00000516672 CFAP74Q9C0B2 1584 aa6.47□□□□□ -1.37
SCARNA13-201ENST00000516672 ABCC1P33527 1531 aa6.46□□□□□ -1.37
SCARNA13-201ENST00000516672 HTRA3P83110 453 aa6.46□□□□□ -1.38
SCARNA13-201ENST00000516672 WRNQ14191 1432 aaPredicted RBP eCLIP6.46□□□□□ -1.38
SCARNA13-201ENST00000516672 WDR90Q96KV7 1748 aa6.46□□□□□ -1.38
SCARNA13-201ENST00000516672 ARHGAP23Q9P227 1491 aa6.46□□□□□ -1.38
SCARNA13-201ENST00000516672 MAP3K1Q13233 1512 aa6.45□□□□□ -1.38
SCARNA13-201ENST00000516672 NRKQ7Z2Y5 1582 aa6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 KIF14Q15058 1648 aa6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 AHDC1Q5TGY3 1603 aaPredicted RBP6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 ARID3CA6NKF2 412 aa6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 ADAMTS2O95450 1211 aa6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 SYT17Q9BSW7 474 aa6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 REREQ9P2R6 1566 aa6.44□□□□□ -1.38
SCARNA13-201ENST00000516672 SCAPERQ9BY12 1400 aa6.43□□□□□ -1.38
SCARNA13-201ENST00000516672 EZH2Q15910 746 aaKnown RBP6.43□□□□□ -1.38
SCARNA13-201ENST00000516672 ABHD8Q96I13 439 aa6.43□□□□□ -1.38
SCARNA13-201ENST00000516672 GPR162Q16538 588 aa6.42□□□□□ -1.38
SCARNA13-201ENST00000516672 ZNF526Q8TF50 670 aaPredicted RBP6.42□□□□□ -1.38
SCARNA13-201ENST00000516672 FHDC1Q9C0D6 1143 aaPredicted RBP6.42□□□□□ -1.38
SCARNA13-201ENST00000516672 DIP2CQ9Y2E4 1556 aa6.42□□□□□ -1.38
SCARNA13-201ENST00000516672 ITSN2Q9NZM3 1697 aa6.42□□□□□ -1.38
SCARNA13-201ENST00000516672 SPHKAPQ2M3C7 1700 aa6.42□□□□□ -1.38
SCARNA13-201ENST00000516672 BRWD3Q6RI45 1802 aa6.41□□□□□ -1.38
SCARNA13-201ENST00000516672 IQGAP2Q13576 1575 aa6.41□□□□□ -1.38
SCARNA13-201ENST00000516672 MYOM1P52179 1685 aa6.41□□□□□ -1.38
SCARNA13-201ENST00000516672 ZC3H13Q5T200 1668 aaKnown RBP6.41□□□□□ -1.38
SCARNA13-201ENST00000516672 GJD4Q96KN9 370 aaPredicted RBP6.4□□□□□ -1.38
SCARNA13-201ENST00000516672 TNRC18O15417 2968 aaPredicted RBP6.4□□□□□ -1.39
SCARNA13-201ENST00000516672 PLCH2O75038 1416 aa6.4□□□□□ -1.39
SCARNA13-201ENST00000516672 DLC1Q96QB1 1528 aa6.4□□□□□ -1.39
SCARNA13-201ENST00000516672 BIVM-ERCC5R4GMW8 1640 aa6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 CLTCQ00610 1675 aaKnown RBP6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 CCDC85CA6NKD9 419 aa6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 THEMISQ8N1K5 641 aaPredicted RBP6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 MYT1LQ9UL68 1186 aa6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 MSH6P52701 1360 aa6.39□□□□□ -1.39
SCARNA13-201ENST00000516672 CAMSAP2Q08AD1 1489 aa6.38□□□□□ -1.39
SCARNA13-201ENST00000516672 ATP7AQ04656 1500 aa6.38□□□□□ -1.39
SCARNA13-201ENST00000516672 TIAM1Q13009 1591 aa6.37□□□□□ -1.39
SCARNA13-201ENST00000516672 A2MP01023 1474 aa6.37□□□□□ -1.39
SCARNA13-201ENST00000516672 KIF3CO14782 793 aa6.37□□□□□ -1.39
SCARNA13-201ENST00000516672 PRPF38BQ5VTL8 546 aaKnown RBP6.37□□□□□ -1.39
SCARNA13-201ENST00000516672 PROSER2Q86WR7 435 aaPredicted RBP6.37□□□□□ -1.39
SCARNA13-201ENST00000516672 ABCA6Q8N139 1617 aa6.36□□□□□ -1.39
SCARNA13-201ENST00000516672 DISP2A7MBM2 1401 aa6.36□□□□□ -1.39
SCARNA13-201ENST00000516672 SLC17A8Q8NDX2 589 aa6.36□□□□□ -1.39
SCARNA13-201ENST00000516672 RGPD1P0DJD0 1748 aa6.36□□□□□ -1.39
SCARNA13-201ENST00000516672 NBPF8Q3BBV2 869 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms