RNA–Protein interactions for RNA: ENST00000516588.1

RNU5A-4P-201, Transcript of RNA, U5A small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU5A-4P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5A-4P-201ENST00000516588 MFSD10Q14728 455 aa12.42□□□□□ -0.42
RNU5A-4P-201ENST00000516588 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
RNU5A-4P-201ENST00000516588 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
RNU5A-4P-201ENST00000516588 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
RNU5A-4P-201ENST00000516588 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
RNU5A-4P-201ENST00000516588 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
RNU5A-4P-201ENST00000516588 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
RNU5A-4P-201ENST00000516588 ZFRQ96KR1 1074 aaKnown RBP12.35□□□□□ -0.43
RNU5A-4P-201ENST00000516588 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
RNU5A-4P-201ENST00000516588 PHF14O94880 888 aa12.34□□□□□ -0.43
RNU5A-4P-201ENST00000516588 LAPTM4BQ86VI4 370 aa12.33□□□□□ -0.44
RNU5A-4P-201ENST00000516588 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
RNU5A-4P-201ENST00000516588 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
RNU5A-4P-201ENST00000516588 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
RNU5A-4P-201ENST00000516588 KCNC4Q03721 635 aa12.28□□□□□ -0.44
RNU5A-4P-201ENST00000516588 Q6ZNB5 142 aa12.28□□□□□ -0.44
RNU5A-4P-201ENST00000516588 ONECUT3O60422 494 aaPredicted RBP12.26□□□□□ -0.45
RNU5A-4P-201ENST00000516588 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
RNU5A-4P-201ENST00000516588 NYAP1Q6ZVC0 841 aa12.24□□□□□ -0.45
RNU5A-4P-201ENST00000516588 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
RNU5A-4P-201ENST00000516588 DPYSL4O14531 572 aa12.22□□□□□ -0.45
RNU5A-4P-201ENST00000516588 EPAS1Q99814 870 aa12.22□□□□□ -0.45
RNU5A-4P-201ENST00000516588 LCE2BO14633 110 aa12.21□□□□□ -0.45
RNU5A-4P-201ENST00000516588 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
RNU5A-4P-201ENST00000516588 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
RNU5A-4P-201ENST00000516588 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
RNU5A-4P-201ENST00000516588 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
RNU5A-4P-201ENST00000516588 DDX12PQ92771 950 aa12.19□□□□□ -0.46
RNU5A-4P-201ENST00000516588 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
RNU5A-4P-201ENST00000516588 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
RNU5A-4P-201ENST00000516588 LRCH3Q96II8 777 aa12.16□□□□□ -0.46
RNU5A-4P-201ENST00000516588 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
RNU5A-4P-201ENST00000516588 GFRA3O60609 400 aa12.12□□□□□ -0.47
RNU5A-4P-201ENST00000516588 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
RNU5A-4P-201ENST00000516588 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
RNU5A-4P-201ENST00000516588 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
RNU5A-4P-201ENST00000516588 SMAPO00193 183 aa12.09□□□□□ -0.47
RNU5A-4P-201ENST00000516588 PPP4CP60510 307 aa12.09□□□□□ -0.47
RNU5A-4P-201ENST00000516588 PACS2Q86VP3 889 aa12.09□□□□□ -0.47
RNU5A-4P-201ENST00000516588 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
RNU5A-4P-201ENST00000516588 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
RNU5A-4P-201ENST00000516588 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
RNU5A-4P-201ENST00000516588 NBR1Q14596 966 aa12.07□□□□□ -0.48
RNU5A-4P-201ENST00000516588 MAP3K7O43318 606 aa12.06□□□□□ -0.48
RNU5A-4P-201ENST00000516588 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
RNU5A-4P-201ENST00000516588 SAMD7Q7Z3H4 446 aa12.06□□□□□ -0.48
RNU5A-4P-201ENST00000516588 PRKD2Q9BZL6 878 aa12.05□□□□□ -0.48
RNU5A-4P-201ENST00000516588 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
RNU5A-4P-201ENST00000516588 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
RNU5A-4P-201ENST00000516588 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.49
RNU5A-4P-201ENST00000516588 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
RNU5A-4P-201ENST00000516588 MTRQ99707 1265 aa12.01□□□□□ -0.49
RNU5A-4P-201ENST00000516588 PRSS12P56730 875 aa12□□□□□ -0.49
RNU5A-4P-201ENST00000516588 PDIA6Q15084 440 aa11.99□□□□□ -0.49
RNU5A-4P-201ENST00000516588 TATDN2Q93075 761 aa11.98□□□□□ -0.49
RNU5A-4P-201ENST00000516588 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
RNU5A-4P-201ENST00000516588 NRG2O14511 850 aaPredicted RBP11.96□□□□□ -0.49
RNU5A-4P-201ENST00000516588 NKX2-3Q8TAU0 364 aa11.95□□□□□ -0.5
RNU5A-4P-201ENST00000516588 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
RNU5A-4P-201ENST00000516588 APLP1P51693 650 aa11.93□□□□□ -0.5
RNU5A-4P-201ENST00000516588 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
RNU5A-4P-201ENST00000516588 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
RNU5A-4P-201ENST00000516588 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
RNU5A-4P-201ENST00000516588 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
RNU5A-4P-201ENST00000516588 NUDT18Q6ZVK8 323 aa11.91□□□□□ -0.5
RNU5A-4P-201ENST00000516588 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
RNU5A-4P-201ENST00000516588 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
RNU5A-4P-201ENST00000516588 RNF40O75150 1001 aa11.88□□□□□ -0.51
RNU5A-4P-201ENST00000516588 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
RNU5A-4P-201ENST00000516588 OSBPP22059 807 aa11.86□□□□□ -0.51
RNU5A-4P-201ENST00000516588 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
RNU5A-4P-201ENST00000516588 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
RNU5A-4P-201ENST00000516588 COPS2P61201 443 aa11.83□□□□□ -0.52
RNU5A-4P-201ENST00000516588 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
RNU5A-4P-201ENST00000516588 E2F4Q16254 413 aa11.82□□□□□ -0.52
RNU5A-4P-201ENST00000516588 SWT1Q5T5J6 900 aaKnown RBP11.82□□□□□ -0.52
RNU5A-4P-201ENST00000516588 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
RNU5A-4P-201ENST00000516588 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
RNU5A-4P-201ENST00000516588 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
RNU5A-4P-201ENST00000516588 ARIH1Q9Y4X5 557 aaPredicted RBP11.8□□□□□ -0.52
RNU5A-4P-201ENST00000516588 ZNF775Q96BV0 537 aaPredicted RBP11.79□□□□□ -0.52
RNU5A-4P-201ENST00000516588 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
RNU5A-4P-201ENST00000516588 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.53
RNU5A-4P-201ENST00000516588 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
RNU5A-4P-201ENST00000516588 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
RNU5A-4P-201ENST00000516588 ZPR1O75312 459 aa11.75□□□□□ -0.53
RNU5A-4P-201ENST00000516588 TMUB1Q9BVT8 246 aa11.74□□□□□ -0.53
RNU5A-4P-201ENST00000516588 GGCXP38435 758 aa11.73□□□□□ -0.53
RNU5A-4P-201ENST00000516588 EYA1Q99502 592 aa11.73□□□□□ -0.53
RNU5A-4P-201ENST00000516588 SLF2Q8IX21 1173 aa11.72□□□□□ -0.53
RNU5A-4P-201ENST00000516588 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
RNU5A-4P-201ENST00000516588 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
RNU5A-4P-201ENST00000516588 SLC19A1P41440 591 aa11.69□□□□□ -0.54
RNU5A-4P-201ENST00000516588 POTECB2RU33 542 aa11.68□□□□□ -0.54
RNU5A-4P-201ENST00000516588 BLOC1S3Q6QNY0 202 aa11.68□□□□□ -0.54
RNU5A-4P-201ENST00000516588 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
RNU5A-4P-201ENST00000516588 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
RNU5A-4P-201ENST00000516588 PPEF1O14829 653 aaPredicted RBP11.67□□□□□ -0.54
RNU5A-4P-201ENST00000516588 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
RNU5A-4P-201ENST00000516588 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms