RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 TET3O43151 1660 aa13.25□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 KANK1Q14678 1352 aa13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 HSPA5P11021 654 aaKnown RBP13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 E9PCH4 1651 aa13.22□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 BCORL1Q5H9F3 1711 aa13.22□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.29
RNU4ATAC12P-201ENST00000516460 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 TRPM2O94759 1503 aa13.2□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 A2MP01023 1474 aa13.2□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 SPATA31E1Q6ZUB1 1445 aa13.2□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 CEP152O94986 1710 aa13.18□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 PTPRTO14522 1441 aa13.17□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 RICTORQ6R327 1708 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 DIP2BQ9P265 1576 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 KIF3BO15066 747 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 ANP32CO43423 234 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 LAMC1P11047 1609 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 EFCAB6Q5THR3 1501 aa13.15□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 USP47Q96K76 1375 aa13.15□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
RNU4ATAC12P-201ENST00000516460 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 ZNF326Q5BKZ1 582 aaKnown RBP13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 DCAF11Q8TEB1 546 aa13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 ZMYM4Q5VZL5 1548 aa13.11□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 PPRC1Q5VV67 1664 aaKnown RBP13.11□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 KIF1BO60333 1816 aa13.11□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 ROCK2O75116 1388 aaKnown RBP13.09□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 ZC3H13Q5T200 1668 aaKnown RBP13.08□□□□□ -0.31
RNU4ATAC12P-201ENST00000516460 KIF7Q2M1P5 1343 aa13.08□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 MADDQ8WXG6 1647 aa13.07□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 FAM69CQ0P6D2 419 aa13.07□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 ABCC3O15438 1527 aa13.06□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 TSPOAP1O95153 1857 aa13.06□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 CAMSAP1Q5T5Y3 1602 aa13.06□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 REREQ9P2R6 1566 aa13.04□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 KIF13AQ9H1H9 1805 aa13.04□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 MYOM2P54296 1465 aa13.04□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 IFT172Q9UG01 1749 aa13.03□□□□□ -0.32
RNU4ATAC12P-201ENST00000516460 NPATQ14207 1427 aa13.02□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 ARHGAP31Q2M1Z3 1444 aa13.02□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 YEATS2Q9ULM3 1422 aa13.01□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 MROH2AA6NES4 1674 aa13□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 AGLP35573 1532 aa13□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 WASHC2CQ9Y4E1 1318 aa13□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 GGT6Q6P531 493 aa13□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 ST20-MTHFSA0A0A6YYL1 179 aa12.99□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 CFAP65Q6ZU64 1925 aaKnown RBP12.99□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 NOS1P29475 1434 aa12.98□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 PIK3C2BO00750 1634 aa12.98□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 PPLO60437 1756 aa12.97□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
RNU4ATAC12P-201ENST00000516460 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 NRXN1Q9ULB1 1477 aa12.96□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms