RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 GTPBP6O43824 516 aaPredicted RBP7.82□□□□□ -1.16
RNU2-53P-201ENST00000516257 SOWAHBA6NEL2 793 aa7.81□□□□□ -1.16
RNU2-53P-201ENST00000516257 Q6ZNB5 142 aa7.8□□□□□ -1.16
RNU2-53P-201ENST00000516257 ZFRQ96KR1 1074 aaKnown RBP7.8□□□□□ -1.16
RNU2-53P-201ENST00000516257 KIAA1468Q9P260 1216 aa7.8□□□□□ -1.16
RNU2-53P-201ENST00000516257 TYW1BQ6NUM6 668 aa7.79□□□□□ -1.16
RNU2-53P-201ENST00000516257 WBP1LQ9NX94 342 aa7.79□□□□□ -1.16
RNU2-53P-201ENST00000516257 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
RNU2-53P-201ENST00000516257 PHF14O94880 888 aa7.78□□□□□ -1.16
RNU2-53P-201ENST00000516257 LAPTM4BQ86VI4 370 aa7.78□□□□□ -1.16
RNU2-53P-201ENST00000516257 FBXW7Q969H0 707 aa7.78□□□□□ -1.16
RNU2-53P-201ENST00000516257 KCNC4Q03721 635 aa7.76□□□□□ -1.17
RNU2-53P-201ENST00000516257 CADPS2Q86UW7 1296 aa7.76□□□□□ -1.17
RNU2-53P-201ENST00000516257 NYAP1Q6ZVC0 841 aa7.75□□□□□ -1.17
RNU2-53P-201ENST00000516257 C6orf132Q5T0Z8 1188 aa7.74□□□□□ -1.17
RNU2-53P-201ENST00000516257 TRIM6-TRIM34B2RNG4 842 aa7.73□□□□□ -1.17
RNU2-53P-201ENST00000516257 LCE2BO14633 110 aa7.73□□□□□ -1.17
RNU2-53P-201ENST00000516257 ONECUT3O60422 494 aaPredicted RBP7.72□□□□□ -1.17
RNU2-53P-201ENST00000516257 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
RNU2-53P-201ENST00000516257 RBM33Q96EV2 1170 aaKnown RBP7.72□□□□□ -1.17
RNU2-53P-201ENST00000516257 HPS5Q9UPZ3 1129 aa7.72□□□□□ -1.17
RNU2-53P-201ENST00000516257 DPYSL4O14531 572 aa7.71□□□□□ -1.18
RNU2-53P-201ENST00000516257 EPAS1Q99814 870 aa7.71□□□□□ -1.18
RNU2-53P-201ENST00000516257 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.71□□□□□ -1.18
RNU2-53P-201ENST00000516257 TSR3Q9UJK0 312 aaKnown RBP7.71□□□□□ -1.18
RNU2-53P-201ENST00000516257 LRCH3Q96II8 777 aa7.7□□□□□ -1.18
RNU2-53P-201ENST00000516257 CAMK2BQ13554 666 aa7.69□□□□□ -1.18
RNU2-53P-201ENST00000516257 DDX12PQ92771 950 aa7.68□□□□□ -1.18
RNU2-53P-201ENST00000516257 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
RNU2-53P-201ENST00000516257 GFRA3O60609 400 aa7.66□□□□□ -1.18
RNU2-53P-201ENST00000516257 TSR1Q2NL82 804 aaKnown RBP7.66□□□□□ -1.18
RNU2-53P-201ENST00000516257 EN1Q05925 392 aaPredicted RBP7.64□□□□□ -1.19
RNU2-53P-201ENST00000516257 LAPTM4AQ15012 233 aa7.64□□□□□ -1.19
RNU2-53P-201ENST00000516257 SMAPO00193 183 aa7.63□□□□□ -1.19
RNU2-53P-201ENST00000516257 NBR1Q14596 966 aa7.63□□□□□ -1.19
RNU2-53P-201ENST00000516257 TJAP1Q5JTD0 557 aa7.63□□□□□ -1.19
RNU2-53P-201ENST00000516257 TRAF7Q6Q0C0 670 aa7.63□□□□□ -1.19
RNU2-53P-201ENST00000516257 MAP3K7O43318 606 aa7.62□□□□□ -1.19
RNU2-53P-201ENST00000516257 DCAF8L2P0C7V8 631 aa7.62□□□□□ -1.19
RNU2-53P-201ENST00000516257 PPP4CP60510 307 aa7.62□□□□□ -1.19
RNU2-53P-201ENST00000516257 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
RNU2-53P-201ENST00000516257 C3orf80F5H4A9 247 aa7.61□□□□□ -1.19
RNU2-53P-201ENST00000516257 SAMD7Q7Z3H4 446 aa7.61□□□□□ -1.19
RNU2-53P-201ENST00000516257 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
RNU2-53P-201ENST00000516257 FAM198AQ9UFP1 575 aa7.61□□□□□ -1.19
RNU2-53P-201ENST00000516257 MTRQ99707 1265 aa7.6□□□□□ -1.19
RNU2-53P-201ENST00000516257 NRG2O14511 850 aaPredicted RBP7.58□□□□□ -1.2
RNU2-53P-201ENST00000516257 PRIM1P49642 420 aaKnown RBP7.58□□□□□ -1.2
RNU2-53P-201ENST00000516257 PPP1R18Q6NYC8 613 aa7.58□□□□□ -1.2
RNU2-53P-201ENST00000516257 CDCA7LQ96GN5 454 aa7.58□□□□□ -1.2
RNU2-53P-201ENST00000516257 PDIA6Q15084 440 aa7.57□□□□□ -1.2
RNU2-53P-201ENST00000516257 ZNF516Q92618 1163 aa7.57□□□□□ -1.2
RNU2-53P-201ENST00000516257 IL21Q9HBE4 155 aa7.57□□□□□ -1.2
RNU2-53P-201ENST00000516257 PRSS12P56730 875 aa7.56□□□□□ -1.2
RNU2-53P-201ENST00000516257 TATDN2Q93075 761 aa7.55□□□□□ -1.2
RNU2-53P-201ENST00000516257 PNMA3Q9UL41 463 aa7.55□□□□□ -1.2
RNU2-53P-201ENST00000516257 RNF40O75150 1001 aa7.54□□□□□ -1.2
RNU2-53P-201ENST00000516257 V9GY48 417 aaPredicted RBP7.54□□□□□ -1.2
RNU2-53P-201ENST00000516257 NBPF26B4DH59 902 aa7.53□□□□□ -1.2
RNU2-53P-201ENST00000516257 APLP1P51693 650 aa7.53□□□□□ -1.2
RNU2-53P-201ENST00000516257 NKX2-3Q8TAU0 364 aa7.53□□□□□ -1.2
RNU2-53P-201ENST00000516257 CDHR5Q9HBB8 845 aa7.53□□□□□ -1.2
RNU2-53P-201ENST00000516257 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.53□□□□□ -1.2
RNU2-53P-201ENST00000516257 GRXCR2A6NFK2 248 aa7.5□□□□□ -1.21
RNU2-53P-201ENST00000516257 SPDYE16A6NNV3 312 aaPredicted RBP7.5□□□□□ -1.21
RNU2-53P-201ENST00000516257 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
RNU2-53P-201ENST00000516257 CERKQ8TCT0 537 aa7.5□□□□□ -1.21
RNU2-53P-201ENST00000516257 PDZRN3Q9UPQ7 1066 aa7.5□□□□□ -1.21
RNU2-53P-201ENST00000516257 ZNF787Q6DD87 383 aa7.49□□□□□ -1.21
RNU2-53P-201ENST00000516257 COPS2P61201 443 aa7.48□□□□□ -1.21
RNU2-53P-201ENST00000516257 SWT1Q5T5J6 900 aaKnown RBP7.46□□□□□ -1.22
RNU2-53P-201ENST00000516257 OSBPP22059 807 aa7.45□□□□□ -1.22
RNU2-53P-201ENST00000516257 ZNF775Q96BV0 537 aaPredicted RBP7.45□□□□□ -1.22
RNU2-53P-201ENST00000516257 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
RNU2-53P-201ENST00000516257 PADI6Q6TGC4 694 aa7.44□□□□□ -1.22
RNU2-53P-201ENST00000516257 TRIM67Q6ZTA4 783 aa7.44□□□□□ -1.22
RNU2-53P-201ENST00000516257 RBM27Q9P2N5 1060 aaKnown RBP7.44□□□□□ -1.22
RNU2-53P-201ENST00000516257 GGCXP38435 758 aa7.43□□□□□ -1.22
RNU2-53P-201ENST00000516257 E2F4Q16254 413 aa7.43□□□□□ -1.22
RNU2-53P-201ENST00000516257 EMID1Q96A84 441 aaPredicted RBP7.43□□□□□ -1.22
RNU2-53P-201ENST00000516257 TTC13Q8NBP0 860 aa7.42□□□□□ -1.22
RNU2-53P-201ENST00000516257 ZPR1O75312 459 aa7.41□□□□□ -1.22
RNU2-53P-201ENST00000516257 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
RNU2-53P-201ENST00000516257 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
RNU2-53P-201ENST00000516257 ARIH1Q9Y4X5 557 aaPredicted RBP7.41□□□□□ -1.22
RNU2-53P-201ENST00000516257 NECTIN2Q92692 538 aa7.4□□□□□ -1.22
RNU2-53P-201ENST00000516257 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.22
RNU2-53P-201ENST00000516257 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
RNU2-53P-201ENST00000516257 TLL1O43897 1013 aa7.39□□□□□ -1.23
RNU2-53P-201ENST00000516257 BBXQ8WY36 941 aaPredicted RBP7.39□□□□□ -1.23
RNU2-53P-201ENST00000516257 BLOC1S3Q6QNY0 202 aa7.38□□□□□ -1.23
RNU2-53P-201ENST00000516257 PCDHB3Q9Y5E6 796 aa7.38□□□□□ -1.23
RNU2-53P-201ENST00000516257 SLC19A1P41440 591 aa7.37□□□□□ -1.23
RNU2-53P-201ENST00000516257 MYT1Q01538 1121 aa7.37□□□□□ -1.23
RNU2-53P-201ENST00000516257 EYA1Q99502 592 aa7.37□□□□□ -1.23
RNU2-53P-201ENST00000516257 POTECB2RU33 542 aa7.36□□□□□ -1.23
RNU2-53P-201ENST00000516257 PKDCCQ504Y2 493 aa7.36□□□□□ -1.23
RNU2-53P-201ENST00000516257 PPEF1O14829 653 aaPredicted RBP7.35□□□□□ -1.23
RNU2-53P-201ENST00000516257 SPRYD7Q5W111 196 aa7.35□□□□□ -1.23
RNU2-53P-201ENST00000516257 S1PR4O95977 384 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms