RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 PPP4R3BQ5MIZ7 849 aa4.12□□□□□ -1.75
RNU6-1041P-201ENST00000516254 ERICH6Q7L0X2 663 aa4.12□□□□□ -1.75
RNU6-1041P-201ENST00000516254 CDAN1Q8IWY9 1227 aa4.12□□□□□ -1.75
RNU6-1041P-201ENST00000516254 FAM163AQ96GL9 167 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1041P-201ENST00000516254 RBM27Q9P2N5 1060 aaKnown RBP4.12□□□□□ -1.75
RNU6-1041P-201ENST00000516254 TRIM66O15016 1216 aa4.11□□□□□ -1.75
RNU6-1041P-201ENST00000516254 NUDT7P0C024 238 aa4.11□□□□□ -1.75
RNU6-1041P-201ENST00000516254 HOXB1P14653 301 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1041P-201ENST00000516254 BRPF1P55201 1214 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1041P-201ENST00000516254 NEUROD2Q15784 382 aa4.11□□□□□ -1.75
RNU6-1041P-201ENST00000516254 ZNF454Q8N9F8 522 aa4.11□□□□□ -1.75
RNU6-1041P-201ENST00000516254 OATP04181 439 aa4.1□□□□□ -1.75
RNU6-1041P-201ENST00000516254 AMHR2Q16671 573 aa4.1□□□□□ -1.75
RNU6-1041P-201ENST00000516254 C6orf132Q5T0Z8 1188 aa4.1□□□□□ -1.75
RNU6-1041P-201ENST00000516254 KCNH8Q96L42 1107 aa4.1□□□□□ -1.75
RNU6-1041P-201ENST00000516254 PTPREP23469 700 aa4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 PDE4DQ08499 809 aa4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 MMRN1Q13201 1228 aa4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 CCDC102AQ96A19 550 aa4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 RBM33Q96EV2 1170 aaKnown RBP4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 BCL2L12Q9HB09 334 aa4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 NPDC1Q9NQX5 325 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1041P-201ENST00000516254 ONECUT3O60422 494 aaPredicted RBP4.08□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PRIM1P49642 420 aaKnown RBP4.08□□□□□ -1.76
RNU6-1041P-201ENST00000516254 LHX6Q9UPM6 363 aa4.08□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PPP1R3GB7ZBB8 358 aa4.07□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PRSS12P56730 875 aa4.07□□□□□ -1.76
RNU6-1041P-201ENST00000516254 TSR1Q2NL82 804 aaKnown RBP4.07□□□□□ -1.76
RNU6-1041P-201ENST00000516254 DDRGK1Q96HY6 314 aa4.07□□□□□ -1.76
RNU6-1041P-201ENST00000516254 ADAM33Q9BZ11 813 aa4.07□□□□□ -1.76
RNU6-1041P-201ENST00000516254 CLCN1P35523 988 aa4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PBX2P40425 430 aa4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 TTC13Q8NBP0 860 aa4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 RBM46Q8TBY0 533 aaKnown RBP4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 KHSRPQ92945 711 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 KDM4CQ9H3R0 1056 aa4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 CDHR5Q9HBB8 845 aa4.06□□□□□ -1.76
RNU6-1041P-201ENST00000516254 TTLL12Q14166 644 aaPredicted RBP4.05□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PACS2Q86VP3 889 aa4.05□□□□□ -1.76
RNU6-1041P-201ENST00000516254 CDCA7LQ96GN5 454 aa4.05□□□□□ -1.76
RNU6-1041P-201ENST00000516254 ERBB3P21860 1342 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 FECHP22830 423 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PADI6Q6TGC4 694 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 METTL3Q86U44 580 aaKnown RBP4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 SLC4A5Q9BY07 1137 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 GOPCQ9HD26 462 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 GPCPD1Q9NPB8 672 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 ADGRG1Q9Y653 693 aa4.04□□□□□ -1.76
RNU6-1041P-201ENST00000516254 NBPF26B4DH59 902 aa4.03□□□□□ -1.76
RNU6-1041P-201ENST00000516254 ARHGAP33O14559 1287 aa4.03□□□□□ -1.76
RNU6-1041P-201ENST00000516254 DIXDC1Q155Q3 683 aa4.03□□□□□ -1.76
RNU6-1041P-201ENST00000516254 PARP9Q8IXQ6 854 aa4.03□□□□□ -1.76
RNU6-1041P-201ENST00000516254 GTF3C3Q9Y5Q9 886 aa4.03□□□□□ -1.76
RNU6-1041P-201ENST00000516254 TRIM6-TRIM34B2RNG4 842 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 EMP3P54852 163 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 RSPH4AQ5TD94 716 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 SPNS2Q8IVW8 549 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 SULF1Q8IWU6 871 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 PXYLP1Q8TE99 480 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 TMUB1Q9BVT8 246 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 RSPH6AQ9H0K4 717 aa4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 GPBP1L1Q9HC44 474 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1041P-201ENST00000516254 ST18O60284 1047 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 COL9A1P20849 921 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 SLC4A3P48751 1232 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 MDM2Q00987 491 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 GIGYF2Q6Y7W6 1299 aaKnown RBP4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 ZNF687Q8N1G0 1237 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 IL27Q8NEV9 243 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 KCNK17Q96T54 332 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 EYA1Q99502 592 aa4.01□□□□□ -1.77
RNU6-1041P-201ENST00000516254 DNAJB2P25686 324 aa4□□□□□ -1.77
RNU6-1041P-201ENST00000516254 SSTR3P32745 418 aaPredicted RBP4□□□□□ -1.77
RNU6-1041P-201ENST00000516254 HDGFP51858 240 aaKnown RBP4□□□□□ -1.77
RNU6-1041P-201ENST00000516254 VARS2Q5ST30 1063 aaKnown RBP4□□□□□ -1.77
RNU6-1041P-201ENST00000516254 TATDN2Q93075 761 aa4□□□□□ -1.77
RNU6-1041P-201ENST00000516254 RABGEF1Q9UJ41 708 aa4□□□□□ -1.77
RNU6-1041P-201ENST00000516254 RCCD1A6NED2 376 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 TK2O00142 265 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 NUDT18Q6ZVK8 323 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 LAPTM4BQ86VI4 370 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 NECTIN2Q92692 538 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 PHOX2BQ99453 314 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 ZBED2Q9BTP6 218 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 FAM117AQ9C073 453 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 NBPF3Q9H094 633 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 FAM217BQ9NTX9 383 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 TSKSQ9UJT2 592 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 PNMA3Q9UL41 463 aa3.99□□□□□ -1.77
RNU6-1041P-201ENST00000516254 PCMTD1Q96MG8 357 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1041P-201ENST00000516254 TMEM134Q9H6X4 195 aa3.98□□□□□ -1.77
RNU6-1041P-201ENST00000516254 KIAA1468Q9P260 1216 aa3.98□□□□□ -1.77
RNU6-1041P-201ENST00000516254 PLEKHG3A1L390 1219 aa3.97□□□□□ -1.77
RNU6-1041P-201ENST00000516254 FAM205CA6NFA0 338 aa3.97□□□□□ -1.77
RNU6-1041P-201ENST00000516254 MS4A1P11836 297 aa3.97□□□□□ -1.77
RNU6-1041P-201ENST00000516254 FAM98CQ17RN3 349 aaKnown RBP3.97□□□□□ -1.77
RNU6-1041P-201ENST00000516254 SH3D19Q5HYK7 790 aa3.97□□□□□ -1.77
RNU6-1041P-201ENST00000516254 BEGAINQ9BUH8 593 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms