RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 PHF14O94880 888 aa4.63□□□□□ -1.67
RNU6-240P-201ENST00000516098 BCAMP50895 628 aa4.63□□□□□ -1.67
RNU6-240P-201ENST00000516098 PROX2Q3B8N5 592 aa4.63□□□□□ -1.67
RNU6-240P-201ENST00000516098 TYW1BQ6NUM6 668 aa4.63□□□□□ -1.67
RNU6-240P-201ENST00000516098 ZFRQ96KR1 1074 aaKnown RBP4.63□□□□□ -1.67
RNU6-240P-201ENST00000516098 PCDHGA10Q9Y5H3 936 aa4.63□□□□□ -1.67
RNU6-240P-201ENST00000516098 MFSD10Q14728 455 aa4.62□□□□□ -1.67
RNU6-240P-201ENST00000516098 COL9A1P20849 921 aa4.61□□□□□ -1.67
RNU6-240P-201ENST00000516098 NKX1-1Q15270 411 aaPredicted RBP4.61□□□□□ -1.67
RNU6-240P-201ENST00000516098 KIAA1468Q9P260 1216 aa4.61□□□□□ -1.67
RNU6-240P-201ENST00000516098 TSR3Q9UJK0 312 aaKnown RBP4.61□□□□□ -1.67
RNU6-240P-201ENST00000516098 FAM98CQ17RN3 349 aaKnown RBP4.6□□□□□ -1.67
RNU6-240P-201ENST00000516098 LRCH3Q96II8 777 aa4.6□□□□□ -1.67
RNU6-240P-201ENST00000516098 EPAS1Q99814 870 aa4.6□□□□□ -1.67
RNU6-240P-201ENST00000516098 LARP6Q9BRS8 491 aaKnown RBP4.6□□□□□ -1.67
RNU6-240P-201ENST00000516098 WBP1LQ9NX94 342 aa4.6□□□□□ -1.67
RNU6-240P-201ENST00000516098 TRIM6-TRIM34B2RNG4 842 aa4.59□□□□□ -1.67
RNU6-240P-201ENST00000516098 TRAF7Q6Q0C0 670 aa4.59□□□□□ -1.67
RNU6-240P-201ENST00000516098 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.59□□□□□ -1.67
RNU6-240P-201ENST00000516098 NRG2O14511 850 aaPredicted RBP4.58□□□□□ -1.68
RNU6-240P-201ENST00000516098 GFRA3O60609 400 aa4.58□□□□□ -1.68
RNU6-240P-201ENST00000516098 HPS5Q9UPZ3 1129 aa4.58□□□□□ -1.68
RNU6-240P-201ENST00000516098 C6orf132Q5T0Z8 1188 aa4.57□□□□□ -1.68
RNU6-240P-201ENST00000516098 EMILIN3Q9NT22 766 aa4.57□□□□□ -1.68
RNU6-240P-201ENST00000516098 SEPT9Q9UHD8 586 aaPredicted RBP4.57□□□□□ -1.68
RNU6-240P-201ENST00000516098 PPP4CP60510 307 aa4.55□□□□□ -1.68
RNU6-240P-201ENST00000516098 V9GY48 417 aaPredicted RBP4.55□□□□□ -1.68
RNU6-240P-201ENST00000516098 LCE2BO14633 110 aa4.54□□□□□ -1.68
RNU6-240P-201ENST00000516098 GTPBP6O43824 516 aaPredicted RBP4.54□□□□□ -1.68
RNU6-240P-201ENST00000516098 PACS2Q86VP3 889 aa4.54□□□□□ -1.68
RNU6-240P-201ENST00000516098 PRKD2Q9BZL6 878 aa4.54□□□□□ -1.68
RNU6-240P-201ENST00000516098 CAMK2BQ13554 666 aa4.53□□□□□ -1.68
RNU6-240P-201ENST00000516098 IL21Q9HBE4 155 aa4.53□□□□□ -1.68
RNU6-240P-201ENST00000516098 TJAP1Q5JTD0 557 aa4.52□□□□□ -1.69
RNU6-240P-201ENST00000516098 EN1Q05925 392 aaPredicted RBP4.51□□□□□ -1.69
RNU6-240P-201ENST00000516098 NECTIN2Q92692 538 aa4.51□□□□□ -1.69
RNU6-240P-201ENST00000516098 MTRQ99707 1265 aa4.51□□□□□ -1.69
RNU6-240P-201ENST00000516098 DPYSL4O14531 572 aa4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 GGCXP38435 758 aa4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 ZNF787Q6DD87 383 aa4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 PPP1R18Q6NYC8 613 aa4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 CERKQ8TCT0 537 aa4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 RBM33Q96EV2 1170 aaKnown RBP4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 TSKSQ9UJT2 592 aa4.5□□□□□ -1.69
RNU6-240P-201ENST00000516098 NBPF26B4DH59 902 aa4.49□□□□□ -1.69
RNU6-240P-201ENST00000516098 MAP3K7O43318 606 aa4.49□□□□□ -1.69
RNU6-240P-201ENST00000516098 NBR1Q14596 966 aa4.49□□□□□ -1.69
RNU6-240P-201ENST00000516098 SAMD7Q7Z3H4 446 aa4.49□□□□□ -1.69
RNU6-240P-201ENST00000516098 PDZRN3Q9UPQ7 1066 aa4.49□□□□□ -1.69
RNU6-240P-201ENST00000516098 HDGFP51858 240 aaKnown RBP4.48□□□□□ -1.69
RNU6-240P-201ENST00000516098 DDX12PQ92771 950 aa4.48□□□□□ -1.69
RNU6-240P-201ENST00000516098 PRSS12P56730 875 aa4.47□□□□□ -1.69
RNU6-240P-201ENST00000516098 PDIA6Q15084 440 aa4.47□□□□□ -1.69
RNU6-240P-201ENST00000516098 CDCA7LQ96GN5 454 aa4.47□□□□□ -1.69
RNU6-240P-201ENST00000516098 TMUB1Q9BVT8 246 aa4.47□□□□□ -1.69
RNU6-240P-201ENST00000516098 SPDYE16A6NNV3 312 aaPredicted RBP4.46□□□□□ -1.7
RNU6-240P-201ENST00000516098 TSR1Q2NL82 804 aaKnown RBP4.46□□□□□ -1.7
RNU6-240P-201ENST00000516098 CADPS2Q86UW7 1296 aa4.46□□□□□ -1.7
RNU6-240P-201ENST00000516098 TATDN2Q93075 761 aa4.46□□□□□ -1.7
RNU6-240P-201ENST00000516098 RBM27Q9P2N5 1060 aaKnown RBP4.46□□□□□ -1.7
RNU6-240P-201ENST00000516098 ZNF775Q96BV0 537 aaPredicted RBP4.45□□□□□ -1.7
RNU6-240P-201ENST00000516098 PNMA3Q9UL41 463 aa4.45□□□□□ -1.7
RNU6-240P-201ENST00000516098 SMAPO00193 183 aa4.44□□□□□ -1.7
RNU6-240P-201ENST00000516098 RNF40O75150 1001 aa4.44□□□□□ -1.7
RNU6-240P-201ENST00000516098 SLC4A3P48751 1232 aa4.44□□□□□ -1.7
RNU6-240P-201ENST00000516098 SLF2Q8IX21 1173 aa4.44□□□□□ -1.7
RNU6-240P-201ENST00000516098 ZNF516Q92618 1163 aa4.44□□□□□ -1.7
RNU6-240P-201ENST00000516098 PRR14Q9BWN1 585 aa4.44□□□□□ -1.7
RNU6-240P-201ENST00000516098 APLP1P51693 650 aa4.43□□□□□ -1.7
RNU6-240P-201ENST00000516098 DGAT1O75907 488 aa4.42□□□□□ -1.7
RNU6-240P-201ENST00000516098 PKDCCQ504Y2 493 aa4.42□□□□□ -1.7
RNU6-240P-201ENST00000516098 NUDT18Q6ZVK8 323 aa4.42□□□□□ -1.7
RNU6-240P-201ENST00000516098 FAM198AQ9UFP1 575 aa4.42□□□□□ -1.7
RNU6-240P-201ENST00000516098 ZPR1O75312 459 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 PRR20EP86478 221 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 PRR20CP86479 221 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 PRR20DP86480 221 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 PRR20BP86481 221 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 PRR20AP86496 221 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 NKX2-3Q8TAU0 364 aa4.41□□□□□ -1.7
RNU6-240P-201ENST00000516098 SLC19A1P41440 591 aa4.4□□□□□ -1.71
RNU6-240P-201ENST00000516098 COPS2P61201 443 aa4.4□□□□□ -1.71
RNU6-240P-201ENST00000516098 ARIH1Q9Y4X5 557 aaPredicted RBP4.4□□□□□ -1.71
RNU6-240P-201ENST00000516098 C3orf80F5H4A9 247 aa4.39□□□□□ -1.71
RNU6-240P-201ENST00000516098 DCAF8L2P0C7V8 631 aa4.39□□□□□ -1.71
RNU6-240P-201ENST00000516098 MYT1Q01538 1121 aa4.39□□□□□ -1.71
RNU6-240P-201ENST00000516098 SWT1Q5T5J6 900 aaKnown RBP4.39□□□□□ -1.71
RNU6-240P-201ENST00000516098 ZNF598Q86UK7 904 aaKnown RBP4.39□□□□□ -1.71
RNU6-240P-201ENST00000516098 SPRYD7Q5W111 196 aa4.38□□□□□ -1.71
RNU6-240P-201ENST00000516098 TRIM67Q6ZTA4 783 aa4.38□□□□□ -1.71
RNU6-240P-201ENST00000516098 ANKLE1Q8NAG6 615 aa4.38□□□□□ -1.71
RNU6-240P-201ENST00000516098 TTC13Q8NBP0 860 aa4.38□□□□□ -1.71
RNU6-240P-201ENST00000516098 PCDHB3Q9Y5E6 796 aa4.38□□□□□ -1.71
RNU6-240P-201ENST00000516098 GRXCR2A6NFK2 248 aa4.37□□□□□ -1.71
RNU6-240P-201ENST00000516098 RNF223E7ERA6 249 aa4.37□□□□□ -1.71
RNU6-240P-201ENST00000516098 OSBPP22059 807 aa4.36□□□□□ -1.71
RNU6-240P-201ENST00000516098 PRIM1P49642 420 aaKnown RBP4.36□□□□□ -1.71
RNU6-240P-201ENST00000516098 E2F4Q16254 413 aa4.36□□□□□ -1.71
RNU6-240P-201ENST00000516098 CDHR5Q9HBB8 845 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms