RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 FCHSD2O94868 740 aa13.15□□□□□ -0.3
PDE4D-225ENST00000515835 GPR37O15354 613 aa13.14□□□□□ -0.31
PDE4D-225ENST00000515835 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
PDE4D-225ENST00000515835 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
PDE4D-225ENST00000515835 PTPREP23469 700 aa13.13□□□□□ -0.31
PDE4D-225ENST00000515835 PTGDRQ13258 359 aa13.13□□□□□ -0.31
PDE4D-225ENST00000515835 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
PDE4D-225ENST00000515835 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
PDE4D-225ENST00000515835 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
PDE4D-225ENST00000515835 HIC1Q14526 733 aa13.11□□□□□ -0.31
PDE4D-225ENST00000515835 ZMYND10O75800 440 aa13.1□□□□□ -0.31
PDE4D-225ENST00000515835 PBX2P40425 430 aa13.1□□□□□ -0.31
PDE4D-225ENST00000515835 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
PDE4D-225ENST00000515835 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
PDE4D-225ENST00000515835 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
PDE4D-225ENST00000515835 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
PDE4D-225ENST00000515835 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
PDE4D-225ENST00000515835 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
PDE4D-225ENST00000515835 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
PDE4D-225ENST00000515835 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
PDE4D-225ENST00000515835 GNPATO15228 680 aa13.07□□□□□ -0.32
PDE4D-225ENST00000515835 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
PDE4D-225ENST00000515835 COL9A1P20849 921 aa13.05□□□□□ -0.32
PDE4D-225ENST00000515835 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
PDE4D-225ENST00000515835 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
PDE4D-225ENST00000515835 PSEN2P49810 448 aa13.02□□□□□ -0.33
PDE4D-225ENST00000515835 PRSS12P56730 875 aa13.02□□□□□ -0.33
PDE4D-225ENST00000515835 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
PDE4D-225ENST00000515835 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
PDE4D-225ENST00000515835 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
PDE4D-225ENST00000515835 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
PDE4D-225ENST00000515835 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-225ENST00000515835 FECHP22830 423 aa12.98□□□□□ -0.33
PDE4D-225ENST00000515835 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
PDE4D-225ENST00000515835 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
PDE4D-225ENST00000515835 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
PDE4D-225ENST00000515835 SLC4A5Q9BY07 1137 aa12.98□□□□□ -0.33
PDE4D-225ENST00000515835 ABCC9O60706 1549 aa12.98□□□□□ -0.33
PDE4D-225ENST00000515835 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
PDE4D-225ENST00000515835 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
PDE4D-225ENST00000515835 POTEMA6NI47 508 aa12.96□□□□□ -0.33
PDE4D-225ENST00000515835 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
PDE4D-225ENST00000515835 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
PDE4D-225ENST00000515835 IRF6O14896 467 aa12.94□□□□□ -0.34
PDE4D-225ENST00000515835 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
PDE4D-225ENST00000515835 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDE4D-225ENST00000515835 TSKSQ9UJT2 592 aa12.93□□□□□ -0.34
PDE4D-225ENST00000515835 TK2O00142 265 aa12.92□□□□□ -0.34
PDE4D-225ENST00000515835 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
PDE4D-225ENST00000515835 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
PDE4D-225ENST00000515835 AK7Q96M32 723 aa12.92□□□□□ -0.34
PDE4D-225ENST00000515835 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
PDE4D-225ENST00000515835 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
PDE4D-225ENST00000515835 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
PDE4D-225ENST00000515835 OATP04181 439 aa12.89□□□□□ -0.35
PDE4D-225ENST00000515835 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
PDE4D-225ENST00000515835 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
PDE4D-225ENST00000515835 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
PDE4D-225ENST00000515835 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
PDE4D-225ENST00000515835 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
PDE4D-225ENST00000515835 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
PDE4D-225ENST00000515835 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
PDE4D-225ENST00000515835 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
PDE4D-225ENST00000515835 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
PDE4D-225ENST00000515835 TATDN2Q93075 761 aa12.85□□□□□ -0.35
PDE4D-225ENST00000515835 TRIM66O15016 1216 aa12.83□□□□□ -0.36
PDE4D-225ENST00000515835 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
PDE4D-225ENST00000515835 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
PDE4D-225ENST00000515835 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
PDE4D-225ENST00000515835 METTL3Q86U44 580 aaKnown RBP12.83□□□□□ -0.36
PDE4D-225ENST00000515835 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
PDE4D-225ENST00000515835 PNMA3Q9UL41 463 aa12.83□□□□□ -0.36
PDE4D-225ENST00000515835 EYA1Q99502 592 aa12.82□□□□□ -0.36
PDE4D-225ENST00000515835 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
PDE4D-225ENST00000515835 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
PDE4D-225ENST00000515835 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
PDE4D-225ENST00000515835 HRO43593 1189 aa12.79□□□□□ -0.36
PDE4D-225ENST00000515835 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
PDE4D-225ENST00000515835 AMHR2Q16671 573 aa12.78□□□□□ -0.36
PDE4D-225ENST00000515835 LAPTM4BQ86VI4 370 aa12.78□□□□□ -0.36
PDE4D-225ENST00000515835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
PDE4D-225ENST00000515835 SMAPO00193 183 aa12.77□□□□□ -0.37
PDE4D-225ENST00000515835 PHOX2BQ99453 314 aa12.77□□□□□ -0.37
PDE4D-225ENST00000515835 PDE4DQ08499 809 aa12.75□□□□□ -0.37
PDE4D-225ENST00000515835 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
PDE4D-225ENST00000515835 MRPL50Q8N5N7 158 aaKnown RBP12.75□□□□□ -0.37
PDE4D-225ENST00000515835 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
PDE4D-225ENST00000515835 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
PDE4D-225ENST00000515835 DNAJB2P25686 324 aa12.74□□□□□ -0.37
PDE4D-225ENST00000515835 STAC3Q96MF2 364 aa12.74□□□□□ -0.37
PDE4D-225ENST00000515835 CLCN1P35523 988 aa12.71□□□□□ -0.37
PDE4D-225ENST00000515835 TMEM134Q9H6X4 195 aa12.71□□□□□ -0.37
PDE4D-225ENST00000515835 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
PDE4D-225ENST00000515835 TTLL12Q14166 644 aaPredicted RBP12.69□□□□□ -0.38
PDE4D-225ENST00000515835 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
PDE4D-225ENST00000515835 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
PDE4D-225ENST00000515835 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
PDE4D-225ENST00000515835 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
PDE4D-225ENST00000515835 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
PDE4D-225ENST00000515835 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms