RNA–Protein interactions for RNA: ENST00000515693.1

CCSER1-213, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 5

Gene CCSER1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-213ENST00000515693 ITGBL1O95965 494 aaPredicted RBP9.53□□□□□ -0.88
CCSER1-213ENST00000515693 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
CCSER1-213ENST00000515693 PHF14O94880 888 aa9.51□□□□□ -0.89
CCSER1-213ENST00000515693 KIAA1468Q9P260 1216 aa9.51□□□□□ -0.89
CCSER1-213ENST00000515693 SOWAHBA6NEL2 793 aa9.5□□□□□ -0.89
CCSER1-213ENST00000515693 ANKK1Q8NFD2 765 aa9.5□□□□□ -0.89
CCSER1-213ENST00000515693 FBXW7Q969H0 707 aa9.49□□□□□ -0.89
CCSER1-213ENST00000515693 ZFRQ96KR1 1074 aaKnown RBP9.49□□□□□ -0.89
CCSER1-213ENST00000515693 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
CCSER1-213ENST00000515693 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
CCSER1-213ENST00000515693 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
CCSER1-213ENST00000515693 WBP1LQ9NX94 342 aa9.48□□□□□ -0.89
CCSER1-213ENST00000515693 SEPT9Q9UHD8 586 aaPredicted RBP9.46□□□□□ -0.9
CCSER1-213ENST00000515693 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
CCSER1-213ENST00000515693 DPYSL4O14531 572 aa9.44□□□□□ -0.9
CCSER1-213ENST00000515693 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
CCSER1-213ENST00000515693 EPAS1Q99814 870 aa9.42□□□□□ -0.9
CCSER1-213ENST00000515693 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
CCSER1-213ENST00000515693 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
CCSER1-213ENST00000515693 KCNC4Q03721 635 aa9.39□□□□□ -0.91
CCSER1-213ENST00000515693 FAM98CQ17RN3 349 aaKnown RBP9.39□□□□□ -0.91
CCSER1-213ENST00000515693 DDX12PQ92771 950 aa9.39□□□□□ -0.91
CCSER1-213ENST00000515693 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
CCSER1-213ENST00000515693 LCE2BO14633 110 aa9.37□□□□□ -0.91
CCSER1-213ENST00000515693 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
CCSER1-213ENST00000515693 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
CCSER1-213ENST00000515693 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
CCSER1-213ENST00000515693 HPS5Q9UPZ3 1129 aa9.36□□□□□ -0.91
CCSER1-213ENST00000515693 C3orf80F5H4A9 247 aa9.34□□□□□ -0.91
CCSER1-213ENST00000515693 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
CCSER1-213ENST00000515693 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
CCSER1-213ENST00000515693 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
CCSER1-213ENST00000515693 Q6ZNB5 142 aa9.33□□□□□ -0.92
CCSER1-213ENST00000515693 LRCH3Q96II8 777 aa9.33□□□□□ -0.92
CCSER1-213ENST00000515693 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
CCSER1-213ENST00000515693 TJAP1Q5JTD0 557 aa9.31□□□□□ -0.92
CCSER1-213ENST00000515693 SMAPO00193 183 aa9.3□□□□□ -0.92
CCSER1-213ENST00000515693 NBR1Q14596 966 aa9.3□□□□□ -0.92
CCSER1-213ENST00000515693 MAP3K7O43318 606 aa9.29□□□□□ -0.92
CCSER1-213ENST00000515693 PDIA6Q15084 440 aa9.29□□□□□ -0.92
CCSER1-213ENST00000515693 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
CCSER1-213ENST00000515693 SAMD7Q7Z3H4 446 aa9.27□□□□□ -0.93
CCSER1-213ENST00000515693 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
CCSER1-213ENST00000515693 PPP4CP60510 307 aa9.26□□□□□ -0.93
CCSER1-213ENST00000515693 PRSS12P56730 875 aa9.25□□□□□ -0.93
CCSER1-213ENST00000515693 GFRA3O60609 400 aa9.23□□□□□ -0.93
CCSER1-213ENST00000515693 MTRQ99707 1265 aa9.23□□□□□ -0.93
CCSER1-213ENST00000515693 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
CCSER1-213ENST00000515693 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
CCSER1-213ENST00000515693 TATDN2Q93075 761 aa9.22□□□□□ -0.93
CCSER1-213ENST00000515693 LAPTM4AQ15012 233 aa9.21□□□□□ -0.94
CCSER1-213ENST00000515693 PPP1R18Q6NYC8 613 aa9.21□□□□□ -0.94
CCSER1-213ENST00000515693 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
CCSER1-213ENST00000515693 PRKD2Q9BZL6 878 aa9.21□□□□□ -0.94
CCSER1-213ENST00000515693 OSBPP22059 807 aa9.19□□□□□ -0.94
CCSER1-213ENST00000515693 BBXQ8WY36 941 aaPredicted RBP9.19□□□□□ -0.94
CCSER1-213ENST00000515693 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
CCSER1-213ENST00000515693 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
CCSER1-213ENST00000515693 APLP1P51693 650 aa9.18□□□□□ -0.94
CCSER1-213ENST00000515693 IL21Q9HBE4 155 aa9.18□□□□□ -0.94
CCSER1-213ENST00000515693 PNMA3Q9UL41 463 aa9.18□□□□□ -0.94
CCSER1-213ENST00000515693 ARIH1Q9Y4X5 557 aaPredicted RBP9.18□□□□□ -0.94
CCSER1-213ENST00000515693 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
CCSER1-213ENST00000515693 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
CCSER1-213ENST00000515693 CERKQ8TCT0 537 aa9.17□□□□□ -0.94
CCSER1-213ENST00000515693 E2F4Q16254 413 aa9.16□□□□□ -0.94
CCSER1-213ENST00000515693 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
CCSER1-213ENST00000515693 NBPF26B4DH59 902 aa9.14□□□□□ -0.95
CCSER1-213ENST00000515693 NRG2O14511 850 aaPredicted RBP9.14□□□□□ -0.95
CCSER1-213ENST00000515693 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
CCSER1-213ENST00000515693 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
CCSER1-213ENST00000515693 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
CCSER1-213ENST00000515693 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
CCSER1-213ENST00000515693 SPRYD3Q8NCJ5 442 aa9.1□□□□□ -0.95
CCSER1-213ENST00000515693 RNF40O75150 1001 aa9.09□□□□□ -0.95
CCSER1-213ENST00000515693 SWT1Q5T5J6 900 aaKnown RBP9.09□□□□□ -0.95
CCSER1-213ENST00000515693 PADI6Q6TGC4 694 aa9.08□□□□□ -0.96
CCSER1-213ENST00000515693 COPS2P61201 443 aa9.07□□□□□ -0.96
CCSER1-213ENST00000515693 EMID1Q96A84 441 aaPredicted RBP9.07□□□□□ -0.96
CCSER1-213ENST00000515693 EYA1Q99502 592 aa9.07□□□□□ -0.96
CCSER1-213ENST00000515693 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
CCSER1-213ENST00000515693 HDGFP51858 240 aaKnown RBP9.05□□□□□ -0.96
CCSER1-213ENST00000515693 TRIM67Q6ZTA4 783 aa9.04□□□□□ -0.96
CCSER1-213ENST00000515693 ZPR1O75312 459 aa9.03□□□□□ -0.96
CCSER1-213ENST00000515693 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
CCSER1-213ENST00000515693 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
CCSER1-213ENST00000515693 TMUB1Q9BVT8 246 aa9.01□□□□□ -0.97
CCSER1-213ENST00000515693 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
CCSER1-213ENST00000515693 RNF223E7ERA6 249 aa8.99□□□□□ -0.97
CCSER1-213ENST00000515693 GGCXP38435 758 aa8.98□□□□□ -0.97
CCSER1-213ENST00000515693 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
CCSER1-213ENST00000515693 BLOC1S3Q6QNY0 202 aa8.98□□□□□ -0.97
CCSER1-213ENST00000515693 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
CCSER1-213ENST00000515693 ZNF775Q96BV0 537 aaPredicted RBP8.98□□□□□ -0.97
CCSER1-213ENST00000515693 NECTIN2Q92692 538 aa8.97□□□□□ -0.97
CCSER1-213ENST00000515693 CFAP44Q96MT7 982 aa8.97□□□□□ -0.97
CCSER1-213ENST00000515693 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
CCSER1-213ENST00000515693 PCDHB3Q9Y5E6 796 aa8.96□□□□□ -0.98
CCSER1-213ENST00000515693 TLL1O43897 1013 aa8.95□□□□□ -0.98
CCSER1-213ENST00000515693 SLC19A1P41440 591 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms