RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 PTPRMP28827 1452 aa14.77□□□□□ -0.04
CDC42SE2-212ENST00000515533 DENND4BO75064 1496 aaPredicted RBP14.76□□□□□ -0.05
CDC42SE2-212ENST00000515533 ARID4BQ4LE39 1312 aaPredicted RBP14.76□□□□□ -0.05
CDC42SE2-212ENST00000515533 MYO5CQ9NQX4 1742 aa14.76□□□□□ -0.05
CDC42SE2-212ENST00000515533 SEC24BO95487 1268 aa14.76□□□□□ -0.05
CDC42SE2-212ENST00000515533 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
CDC42SE2-212ENST00000515533 AKNAQ7Z591 1439 aa14.75□□□□□ -0.05
CDC42SE2-212ENST00000515533 RIMS1Q86UR5 1692 aaKnown RBP14.75□□□□□ -0.05
CDC42SE2-212ENST00000515533 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
CDC42SE2-212ENST00000515533 TRIM35Q9UPQ4 493 aa14.75□□□□□ -0.05
CDC42SE2-212ENST00000515533 ZMYM4Q5VZL5 1548 aa14.72□□□□□ -0.05
CDC42SE2-212ENST00000515533 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
CDC42SE2-212ENST00000515533 IER5LQ5T953 404 aa14.72□□□□□ -0.05
CDC42SE2-212ENST00000515533 FMN1Q68DA7 1419 aa14.72□□□□□ -0.05
CDC42SE2-212ENST00000515533 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.06
CDC42SE2-212ENST00000515533 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
CDC42SE2-212ENST00000515533 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
CDC42SE2-212ENST00000515533 ATP1B4Q9UN42 357 aaPredicted RBP14.69□□□□□ -0.06
CDC42SE2-212ENST00000515533 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
CDC42SE2-212ENST00000515533 POGZQ7Z3K3 1410 aa14.68□□□□□ -0.06
CDC42SE2-212ENST00000515533 KIF14Q15058 1648 aa14.68□□□□□ -0.06
CDC42SE2-212ENST00000515533 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
CDC42SE2-212ENST00000515533 LRRIQ1Q96JM4 1722 aa14.68□□□□□ -0.06
CDC42SE2-212ENST00000515533 SIGLEC1Q9BZZ2 1709 aa14.67□□□□□ -0.06
CDC42SE2-212ENST00000515533 MAGI2Q86UL8 1455 aa14.67□□□□□ -0.06
CDC42SE2-212ENST00000515533 ARHGAP35Q9NRY4 1499 aa14.67□□□□□ -0.06
CDC42SE2-212ENST00000515533 FKBP8Q14318 412 aa14.66□□□□□ -0.06
CDC42SE2-212ENST00000515533 CDK11AQ9UQ88 783 aaPredicted RBP14.66□□□□□ -0.06
CDC42SE2-212ENST00000515533 PLCH2O75038 1416 aa14.66□□□□□ -0.06
CDC42SE2-212ENST00000515533 CDAN1Q8IWY9 1227 aa14.65□□□□□ -0.06
CDC42SE2-212ENST00000515533 SCAPERQ9BY12 1400 aa14.65□□□□□ -0.06
CDC42SE2-212ENST00000515533 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
CDC42SE2-212ENST00000515533 LMTK3Q96Q04 1460 aa14.63□□□□□ -0.07
CDC42SE2-212ENST00000515533 CLIP1P30622 1438 aa14.62□□□□□ -0.07
CDC42SE2-212ENST00000515533 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
CDC42SE2-212ENST00000515533 CDC42BPBQ9Y5S2 1711 aa14.61□□□□□ -0.07
CDC42SE2-212ENST00000515533 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
CDC42SE2-212ENST00000515533 EFCAB2Q5VUJ9 269 aa14.6□□□□□ -0.07
CDC42SE2-212ENST00000515533 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
CDC42SE2-212ENST00000515533 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
CDC42SE2-212ENST00000515533 MLECQ14165 292 aa14.58□□□□□ -0.08
CDC42SE2-212ENST00000515533 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
CDC42SE2-212ENST00000515533 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
CDC42SE2-212ENST00000515533 C9orf84Q5VXU9 1444 aa14.58□□□□□ -0.08
CDC42SE2-212ENST00000515533 ATP10AO60312 1499 aa14.57□□□□□ -0.08
CDC42SE2-212ENST00000515533 SETD1BQ9UPS6 1966 aaKnown RBP14.57□□□□□ -0.08
CDC42SE2-212ENST00000515533 KDM5CP41229 1560 aa14.56□□□□□ -0.08
CDC42SE2-212ENST00000515533 FBXO41Q8TF61 875 aa14.56□□□□□ -0.08
CDC42SE2-212ENST00000515533 CCDC18Q5T9S5 1454 aa14.56□□□□□ -0.08
CDC42SE2-212ENST00000515533 ARHGEF12Q9NZN5 1544 aa14.56□□□□□ -0.08
CDC42SE2-212ENST00000515533 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
CDC42SE2-212ENST00000515533 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
CDC42SE2-212ENST00000515533 PLCG2P16885 1265 aa14.54□□□□□ -0.08
CDC42SE2-212ENST00000515533 MYT1LQ9UL68 1186 aa14.54□□□□□ -0.08
CDC42SE2-212ENST00000515533 ABCA6Q8N139 1617 aa14.52□□□□□ -0.08
CDC42SE2-212ENST00000515533 DIP2CQ9Y2E4 1556 aa14.52□□□□□ -0.08
CDC42SE2-212ENST00000515533 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.08
CDC42SE2-212ENST00000515533 HSPA2P54652 639 aa14.52□□□□□ -0.09
CDC42SE2-212ENST00000515533 IRX5P78411 483 aaPredicted RBP14.52□□□□□ -0.09
CDC42SE2-212ENST00000515533 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.09
CDC42SE2-212ENST00000515533 ABCC1P33527 1531 aa14.51□□□□□ -0.09
CDC42SE2-212ENST00000515533 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
CDC42SE2-212ENST00000515533 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
CDC42SE2-212ENST00000515533 PYGBP11216 843 aa14.5□□□□□ -0.09
CDC42SE2-212ENST00000515533 AFAP1Q8N556 730 aa14.5□□□□□ -0.09
CDC42SE2-212ENST00000515533 FYCO1Q9BQS8 1478 aa14.49□□□□□ -0.09
CDC42SE2-212ENST00000515533 C3P01024 1663 aa14.49□□□□□ -0.09
CDC42SE2-212ENST00000515533 KIDINS220Q9ULH0 1771 aa14.48□□□□□ -0.09
CDC42SE2-212ENST00000515533 MLH3Q9UHC1 1453 aa14.48□□□□□ -0.09
CDC42SE2-212ENST00000515533 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
CDC42SE2-212ENST00000515533 TRAPPC8Q9Y2L5 1435 aa14.44□□□□□ -0.1
CDC42SE2-212ENST00000515533 CEBPAP49715 358 aaPredicted RBP14.44□□□□□ -0.1
CDC42SE2-212ENST00000515533 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
CDC42SE2-212ENST00000515533 UHRF1BP1Q6BDS2 1440 aa14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 AGLP35573 1532 aa14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 ST18O60284 1047 aa14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 ESF1Q9H501 851 aaKnown RBP14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 OCEL1Q9H607 264 aa14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 PCDHB8Q9UN66 801 aa14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 SAMD9LQ8IVG5 1584 aa14.43□□□□□ -0.1
CDC42SE2-212ENST00000515533 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
CDC42SE2-212ENST00000515533 MMRN1Q13201 1228 aa14.42□□□□□ -0.1
CDC42SE2-212ENST00000515533 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
CDC42SE2-212ENST00000515533 MROH2AA6NES4 1674 aa14.4□□□□□ -0.1
CDC42SE2-212ENST00000515533 ZNF777Q9ULD5 760 aaPredicted RBP14.4□□□□□ -0.1
CDC42SE2-212ENST00000515533 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
CDC42SE2-212ENST00000515533 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
CDC42SE2-212ENST00000515533 CNTLNQ9NXG0 1405 aa14.37□□□□□ -0.11
CDC42SE2-212ENST00000515533 ATP7AQ04656 1500 aa14.36□□□□□ -0.11
CDC42SE2-212ENST00000515533 PLEKHH2Q8IVE3 1493 aa14.36□□□□□ -0.11
CDC42SE2-212ENST00000515533 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
CDC42SE2-212ENST00000515533 ADGBQ8N7X0 1667 aa14.36□□□□□ -0.11
CDC42SE2-212ENST00000515533 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
CDC42SE2-212ENST00000515533 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
CDC42SE2-212ENST00000515533 SPAG9O60271 1321 aaKnown RBP14.35□□□□□ -0.11
CDC42SE2-212ENST00000515533 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
CDC42SE2-212ENST00000515533 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
CDC42SE2-212ENST00000515533 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDC42SE2-212ENST00000515533 CFDP1Q9UEE9 299 aaPredicted RBP14.33□□□□□ -0.12
CDC42SE2-212ENST00000515533 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms