RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	MYT1L	Q9UL68	1186 aa		12.25	□□□□□ -0.45
HIPK1-210	ENST00000514621	KCNH8	Q96L42	1107 aa		12.24	□□□□□ -0.45
HIPK1-210	ENST00000514621	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.23	□□□□□ -0.45
HIPK1-210	ENST00000514621	PHF14	O94880	888 aa		12.23	□□□□□ -0.45
HIPK1-210	ENST00000514621	TK2	O00142	265 aa		12.22	□□□□□ -0.45
HIPK1-210	ENST00000514621	PTPRE	P23469	700 aa		12.22	□□□□□ -0.45
HIPK1-210	ENST00000514621	P3H3	Q8IVL6	736 aa		12.22	□□□□□ -0.45
HIPK1-210	ENST00000514621	RNF166	Q96A37	237 aa	Predicted RBP	12.22	□□□□□ -0.45
HIPK1-210	ENST00000514621	VSIG10	Q8N0Z9	540 aa		12.21	□□□□□ -0.45
HIPK1-210	ENST00000514621	ARHGEF1	Q92888	912 aa	Known RBP	12.21	□□□□□ -0.45
HIPK1-210	ENST00000514621	TYW1B	Q6NUM6	668 aa		12.2	□□□□□ -0.46
HIPK1-210	ENST00000514621	KCNV2	Q8TDN2	545 aa		12.19	□□□□□ -0.46
HIPK1-210	ENST00000514621	DDX12P	Q92771	950 aa		12.19	□□□□□ -0.46
HIPK1-210	ENST00000514621	FBXW7	Q969H0	707 aa		12.19	□□□□□ -0.46
HIPK1-210	ENST00000514621	HR	O43593	1189 aa		12.18	□□□□□ -0.46
HIPK1-210	ENST00000514621	EIF4G1	Q04637	1599 aa	Known RBP	12.18	□□□□□ -0.46
HIPK1-210	ENST00000514621	EPAS1	Q99814	870 aa		12.17	□□□□□ -0.46
HIPK1-210	ENST00000514621	KDM2A	Q9Y2K7	1162 aa		12.17	□□□□□ -0.46
HIPK1-210	ENST00000514621	SLC4A5	Q9BY07	1137 aa		12.16	□□□□□ -0.46
HIPK1-210	ENST00000514621	VPS9D1	Q9Y2B5	631 aa		12.16	□□□□□ -0.46
HIPK1-210	ENST00000514621	ZBED2	Q9BTP6	218 aa		12.14	□□□□□ -0.47
HIPK1-210	ENST00000514621	PPP1R3G	B7ZBB8	358 aa		12.13	□□□□□ -0.47
HIPK1-210	ENST00000514621	COL9A1	P20849	921 aa		12.12	□□□□□ -0.47
HIPK1-210	ENST00000514621	NBR1	Q14596	966 aa		12.12	□□□□□ -0.47
HIPK1-210	ENST00000514621	CECR2	Q9BXF3	1484 aa		12.12	□□□□□ -0.47
HIPK1-210	ENST00000514621	CC2D2A	Q9P2K1	1620 aa		12.11	□□□□□ -0.47
HIPK1-210	ENST00000514621	EN1	Q05925	392 aa	Predicted RBP	12.1	□□□□□ -0.47
HIPK1-210	ENST00000514621	C6orf132	Q5T0Z8	1188 aa		12.1	□□□□□ -0.47
HIPK1-210	ENST00000514621	RBM33	Q96EV2	1170 aa	Known RBP	12.1	□□□□□ -0.47
HIPK1-210	ENST00000514621	GRXCR2	A6NFK2	248 aa		12.07	□□□□□ -0.48
HIPK1-210	ENST00000514621	PRIM1	P49642	420 aa	Known RBP	12.07	□□□□□ -0.48
HIPK1-210	ENST00000514621	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.06	□□□□□ -0.48
HIPK1-210	ENST00000514621	PROX2	Q3B8N5	592 aa		12.06	□□□□□ -0.48
HIPK1-210	ENST00000514621	MAP3K7	O43318	606 aa		12.05	□□□□□ -0.48
HIPK1-210	ENST00000514621	TSR1	Q2NL82	804 aa	Known RBP	12.05	□□□□□ -0.48
HIPK1-210	ENST00000514621	STAC3	Q96MF2	364 aa		12.03	□□□□□ -0.48
HIPK1-210	ENST00000514621	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.02	□□□□□ -0.49
HIPK1-210	ENST00000514621	SMARCA4	P51532	1647 aa		12.02	□□□□□ -0.49
HIPK1-210	ENST00000514621	OSBP	P22059	807 aa		12.02	□□□□□ -0.49
HIPK1-210	ENST00000514621	RABGEF1	Q9UJ41	708 aa		12	□□□□□ -0.49
HIPK1-210	ENST00000514621	KCTD12	Q96CX2	325 aa	Known RBP	11.99	□□□□□ -0.49
HIPK1-210	ENST00000514621	NBPF3	Q9H094	633 aa		11.99	□□□□□ -0.49
HIPK1-210	ENST00000514621	MROH2B	Q7Z745	1585 aa		11.99	□□□□□ -0.49
HIPK1-210	ENST00000514621	MLLT3	P42568	568 aa	Predicted RBP	11.98	□□□□□ -0.49
HIPK1-210	ENST00000514621	MRPL50	Q8N5N7	158 aa	Known RBP	11.98	□□□□□ -0.49
HIPK1-210	ENST00000514621	ATAD2B	Q9ULI0	1458 aa		11.96	□□□□□ -0.49
HIPK1-210	ENST00000514621	TRIM6-TRIM34	B2RNG4	842 aa		11.96	□□□□□ -0.49
HIPK1-210	ENST00000514621	SEMA3E	O15041	775 aa		11.96	□□□□□ -0.49
HIPK1-210	ENST00000514621	CDHR5	Q9HBB8	845 aa		11.96	□□□□□ -0.49
HIPK1-210	ENST00000514621	KIAA1468	Q9P260	1216 aa		11.96	□□□□□ -0.49
HIPK1-210	ENST00000514621	ONECUT3	O60422	494 aa	Predicted RBP	11.95	□□□□□ -0.5
HIPK1-210	ENST00000514621	HCST	Q9UBK5	93 aa		11.95	□□□□□ -0.5
HIPK1-210	ENST00000514621	NCAPD3	P42695	1498 aa		11.95	□□□□□ -0.5
HIPK1-210	ENST00000514621	SMARCA2	P51531	1590 aa		11.92	□□□□□ -0.5
HIPK1-210	ENST00000514621	SMYD5	Q6GMV2	418 aa		11.92	□□□□□ -0.5
HIPK1-210	ENST00000514621	TSKS	Q9UJT2	592 aa		11.92	□□□□□ -0.5
HIPK1-210	ENST00000514621	GOLGA8CP	A6NN73	597 aa		11.91	□□□□□ -0.5
HIPK1-210	ENST00000514621	CERK	Q8TCT0	537 aa		11.91	□□□□□ -0.5
HIPK1-210	ENST00000514621	TESPA1	A2RU30	521 aa	Predicted RBP	11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	PRSS12	P56730	875 aa		11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	THSD4	Q6ZMP0	1018 aa		11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	LAPTM4B	Q86VI4	370 aa		11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	WNT2B	Q93097	391 aa		11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	CDCA7L	Q96GN5	454 aa		11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	PEG3	Q9GZU2	1588 aa		11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.9	□□□□□ -0.5
HIPK1-210	ENST00000514621	RSF1	Q96T23	1441 aa	Predicted RBP	11.89	□□□□□ -0.51
HIPK1-210	ENST00000514621	FAM198A	Q9UFP1	575 aa		11.88	□□□□□ -0.51
HIPK1-210	ENST00000514621	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.87	□□□□□ -0.51
HIPK1-210	ENST00000514621	HMGXB3	Q12766	1538 aa		11.86	□□□□□ -0.51
HIPK1-210	ENST00000514621	PACS2	Q86VP3	889 aa		11.86	□□□□□ -0.51
HIPK1-210	ENST00000514621	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.85	□□□□□ -0.51
HIPK1-210	ENST00000514621	PTPN5	P54829	565 aa		11.85	□□□□□ -0.51
HIPK1-210	ENST00000514621	FAM98C	Q17RN3	349 aa	Known RBP	11.85	□□□□□ -0.51
HIPK1-210	ENST00000514621	ANKK1	Q8NFD2	765 aa		11.85	□□□□□ -0.51
HIPK1-210	ENST00000514621	ZFR	Q96KR1	1074 aa	Known RBP	11.85	□□□□□ -0.51
HIPK1-210	ENST00000514621	RBM27	Q9P2N5	1060 aa	Known RBP	11.85	□□□□□ -0.51
HIPK1-210	ENST00000514621	WIZ	O95785	1651 aa		11.84	□□□□□ -0.51
HIPK1-210	ENST00000514621	C3orf80	F5H4A9	247 aa		11.83	□□□□□ -0.52
HIPK1-210	ENST00000514621	SLC24A1	O60721	1099 aa		11.83	□□□□□ -0.52
HIPK1-210	ENST00000514621	NUTM2F	A1L443	756 aa		11.82	□□□□□ -0.52
HIPK1-210	ENST00000514621	TULP1	O00294	542 aa	Predicted RBP	11.81	□□□□□ -0.52
HIPK1-210	ENST00000514621	BCAM	P50895	628 aa		11.81	□□□□□ -0.52
HIPK1-210	ENST00000514621	TTC13	Q8NBP0	860 aa		11.81	□□□□□ -0.52
HIPK1-210	ENST00000514621	SOWAHB	A6NEL2	793 aa		11.8	□□□□□ -0.52
HIPK1-210	ENST00000514621	NBPF26	B4DH59	902 aa		11.8	□□□□□ -0.52
HIPK1-210	ENST00000514621	SMAP	O00193	183 aa		11.8	□□□□□ -0.52
HIPK1-210	ENST00000514621	PADI6	Q6TGC4	694 aa		11.8	□□□□□ -0.52
HIPK1-210	ENST00000514621	PTGDR	Q13258	359 aa		11.79	□□□□□ -0.52
HIPK1-210	ENST00000514621	RBM26	Q5T8P6	1007 aa	Known RBP	11.78	□□□□□ -0.52
HIPK1-210	ENST00000514621	TATDN2	Q93075	761 aa		11.78	□□□□□ -0.52
HIPK1-210	ENST00000514621	PNMA3	Q9UL41	463 aa		11.78	□□□□□ -0.52
HIPK1-210	ENST00000514621	NUDT18	Q6ZVK8	323 aa		11.76	□□□□□ -0.53
HIPK1-210	ENST00000514621	PLA2G2E	Q9NZK7	142 aa		11.76	□□□□□ -0.53
HIPK1-210	ENST00000514621	FCHSD2	O94868	740 aa		11.75	□□□□□ -0.53
HIPK1-210	ENST00000514621	LRCH3	Q96II8	777 aa		11.74	□□□□□ -0.53
HIPK1-210	ENST00000514621	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.74	□□□□□ -0.53
HIPK1-210	ENST00000514621	TOP2A	P11388	1531 aa	Known RBP	11.72	□□□□□ -0.53
HIPK1-210	ENST00000514621	SAMD7	Q7Z3H4	446 aa		11.71	□□□□□ -0.53
HIPK1-210	ENST00000514621	WBP1L	Q9NX94	342 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms