RNA–Protein interactions for RNA: ENST00000514384.1

SMIM20-202, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-202ENST00000514384 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
SMIM20-202ENST00000514384 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
SMIM20-202ENST00000514384 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
SMIM20-202ENST00000514384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMIM20-202ENST00000514384 NPATQ14207 1427 aa11.29□□□□□ -0.6
SMIM20-202ENST00000514384 SETBP1Q9Y6X0 1596 aa11.28□□□□□ -0.6
SMIM20-202ENST00000514384 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
SMIM20-202ENST00000514384 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
SMIM20-202ENST00000514384 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
SMIM20-202ENST00000514384 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.61
SMIM20-202ENST00000514384 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.61
SMIM20-202ENST00000514384 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.61
SMIM20-202ENST00000514384 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
SMIM20-202ENST00000514384 LRRC7Q96NW7 1537 aa11.26□□□□□ -0.61
SMIM20-202ENST00000514384 PLEKHD1A6NEE1 506 aa11.26□□□□□ -0.61
SMIM20-202ENST00000514384 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
SMIM20-202ENST00000514384 DIP2CQ9Y2E4 1556 aa11.25□□□□□ -0.61
SMIM20-202ENST00000514384 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
SMIM20-202ENST00000514384 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
SMIM20-202ENST00000514384 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
SMIM20-202ENST00000514384 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
SMIM20-202ENST00000514384 ZNF142P52746 1687 aaPredicted RBP11.24□□□□□ -0.61
SMIM20-202ENST00000514384 AGLP35573 1532 aa11.23□□□□□ -0.61
SMIM20-202ENST00000514384 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
SMIM20-202ENST00000514384 NUP153P49790 1475 aaKnown RBP11.21□□□□□ -0.61
SMIM20-202ENST00000514384 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
SMIM20-202ENST00000514384 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
SMIM20-202ENST00000514384 RXRBP28702 533 aa11.2□□□□□ -0.62
SMIM20-202ENST00000514384 FARP1Q9Y4F1 1045 aaPredicted RBP11.2□□□□□ -0.62
SMIM20-202ENST00000514384 RAPGEF6Q8TEU7 1601 aa11.2□□□□□ -0.62
SMIM20-202ENST00000514384 PLCH2O75038 1416 aa11.19□□□□□ -0.62
SMIM20-202ENST00000514384 EVX2Q03828 476 aa11.19□□□□□ -0.62
SMIM20-202ENST00000514384 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
SMIM20-202ENST00000514384 CTTNBP2Q8WZ74 1663 aa11.18□□□□□ -0.62
SMIM20-202ENST00000514384 ZNF772Q68DY9 489 aaPredicted RBP11.18□□□□□ -0.62
SMIM20-202ENST00000514384 REREQ9P2R6 1566 aa11.18□□□□□ -0.62
SMIM20-202ENST00000514384 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
SMIM20-202ENST00000514384 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
SMIM20-202ENST00000514384 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
SMIM20-202ENST00000514384 MEX3CQ5U5Q3 659 aaKnown RBP11.17□□□□□ -0.62
SMIM20-202ENST00000514384 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
SMIM20-202ENST00000514384 ANKLE2Q86XL3 938 aa11.16□□□□□ -0.62
SMIM20-202ENST00000514384 A2ML1A8K2U0 1454 aa11.16□□□□□ -0.62
SMIM20-202ENST00000514384 NPHP4O75161 1426 aaPredicted RBP11.16□□□□□ -0.62
SMIM20-202ENST00000514384 FAM135BQ49AJ0 1406 aa11.16□□□□□ -0.62
SMIM20-202ENST00000514384 KDM5CP41229 1560 aa11.16□□□□□ -0.62
SMIM20-202ENST00000514384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMIM20-202ENST00000514384 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.62
SMIM20-202ENST00000514384 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
SMIM20-202ENST00000514384 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
SMIM20-202ENST00000514384 CLCN6P51797 869 aa11.15□□□□□ -0.62
SMIM20-202ENST00000514384 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.62
SMIM20-202ENST00000514384 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
SMIM20-202ENST00000514384 LRP6O75581 1613 aa11.15□□□□□ -0.62
SMIM20-202ENST00000514384 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
SMIM20-202ENST00000514384 CLTCQ00610 1675 aaKnown RBP11.13□□□□□ -0.63
SMIM20-202ENST00000514384 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
SMIM20-202ENST00000514384 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
SMIM20-202ENST00000514384 JCADQ9P266 1359 aa11.11□□□□□ -0.63
SMIM20-202ENST00000514384 MLH3Q9UHC1 1453 aa11.11□□□□□ -0.63
SMIM20-202ENST00000514384 RGS12O14924 1447 aa11.1□□□□□ -0.63
SMIM20-202ENST00000514384 GABBR2O75899 941 aa11.1□□□□□ -0.63
SMIM20-202ENST00000514384 SYNMO15061 1565 aa11.1□□□□□ -0.63
SMIM20-202ENST00000514384 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
SMIM20-202ENST00000514384 RANGAP1P46060 587 aaPredicted RBP11.09□□□□□ -0.63
SMIM20-202ENST00000514384 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
SMIM20-202ENST00000514384 GGT6Q6P531 493 aa11.09□□□□□ -0.63
SMIM20-202ENST00000514384 CDK12Q9NYV4 1490 aaPredicted RBP11.08□□□□□ -0.64
SMIM20-202ENST00000514384 YY1P25490 414 aa11.08□□□□□ -0.64
SMIM20-202ENST00000514384 ABCC1P33527 1531 aa11.08□□□□□ -0.64
SMIM20-202ENST00000514384 MED14O60244 1454 aa11.06□□□□□ -0.64
SMIM20-202ENST00000514384 ARHGAP5Q13017 1502 aa11.06□□□□□ -0.64
SMIM20-202ENST00000514384 CDK13Q14004 1512 aaKnown RBP11.06□□□□□ -0.64
SMIM20-202ENST00000514384 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
SMIM20-202ENST00000514384 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
SMIM20-202ENST00000514384 TNRQ92752 1358 aa11.04□□□□□ -0.64
SMIM20-202ENST00000514384 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
SMIM20-202ENST00000514384 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
SMIM20-202ENST00000514384 XIRP1Q702N8 1843 aaKnown RBP11.03□□□□□ -0.64
SMIM20-202ENST00000514384 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
SMIM20-202ENST00000514384 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
SMIM20-202ENST00000514384 AFF2P51816 1311 aa11.03□□□□□ -0.64
SMIM20-202ENST00000514384 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
SMIM20-202ENST00000514384 PHLPP1O60346 1717 aa11.02□□□□□ -0.65
SMIM20-202ENST00000514384 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.65
SMIM20-202ENST00000514384 ATAD2Q6PL18 1390 aa11.02□□□□□ -0.65
SMIM20-202ENST00000514384 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
SMIM20-202ENST00000514384 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
SMIM20-202ENST00000514384 TMEM94Q12767 1356 aa11.01□□□□□ -0.65
SMIM20-202ENST00000514384 DEPDC5O75140 1603 aa11□□□□□ -0.65
SMIM20-202ENST00000514384 RBM6P78332 1123 aaKnown RBP10.99□□□□□ -0.65
SMIM20-202ENST00000514384 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
SMIM20-202ENST00000514384 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
SMIM20-202ENST00000514384 FAM135AQ9P2D6 1515 aa10.98□□□□□ -0.65
SMIM20-202ENST00000514384 KIF14Q15058 1648 aa10.98□□□□□ -0.65
SMIM20-202ENST00000514384 UGGT1Q9NYU2 1555 aa10.97□□□□□ -0.65
SMIM20-202ENST00000514384 LRP5O75197 1615 aa10.97□□□□□ -0.65
SMIM20-202ENST00000514384 COL16A1Q07092 1604 aaPredicted RBP10.96□□□□□ -0.65
SMIM20-202ENST00000514384 PSDA5PKW4 1024 aaPredicted RBP10.96□□□□□ -0.65
SMIM20-202ENST00000514384 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms