RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 DDX12PQ92771 950 aa8.75□□□□□ -1.01
PROM1-216ENST00000513946 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
PROM1-216ENST00000513946 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
PROM1-216ENST00000513946 C6orf132Q5T0Z8 1188 aa8.74□□□□□ -1.01
PROM1-216ENST00000513946 KCNH8Q96L42 1107 aa8.73□□□□□ -1.01
PROM1-216ENST00000513946 PPP1R3GB7ZBB8 358 aa8.72□□□□□ -1.01
PROM1-216ENST00000513946 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
PROM1-216ENST00000513946 EN1Q05925 392 aaPredicted RBP8.69□□□□□ -1.02
PROM1-216ENST00000513946 PROX2Q3B8N5 592 aa8.69□□□□□ -1.02
PROM1-216ENST00000513946 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
PROM1-216ENST00000513946 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
PROM1-216ENST00000513946 OSBPP22059 807 aa8.68□□□□□ -1.02
PROM1-216ENST00000513946 KCNV2Q8TDN2 545 aa8.68□□□□□ -1.02
PROM1-216ENST00000513946 ARHGEF1Q92888 912 aaKnown RBP8.68□□□□□ -1.02
PROM1-216ENST00000513946 NBR1Q14596 966 aa8.67□□□□□ -1.02
PROM1-216ENST00000513946 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
PROM1-216ENST00000513946 GRXCR2A6NFK2 248 aa8.66□□□□□ -1.02
PROM1-216ENST00000513946 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
PROM1-216ENST00000513946 KCTD12Q96CX2 325 aaKnown RBP8.64□□□□□ -1.03
PROM1-216ENST00000513946 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
PROM1-216ENST00000513946 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
PROM1-216ENST00000513946 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
PROM1-216ENST00000513946 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
PROM1-216ENST00000513946 MAP3K7O43318 606 aa8.61□□□□□ -1.03
PROM1-216ENST00000513946 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
PROM1-216ENST00000513946 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
PROM1-216ENST00000513946 FAM198AQ9UFP1 575 aa8.61□□□□□ -1.03
PROM1-216ENST00000513946 TSKSQ9UJT2 592 aa8.61□□□□□ -1.03
PROM1-216ENST00000513946 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
PROM1-216ENST00000513946 KDM2AQ9Y2K7 1162 aa8.6□□□□□ -1.03
PROM1-216ENST00000513946 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
PROM1-216ENST00000513946 LAPTM4BQ86VI4 370 aa8.59□□□□□ -1.03
PROM1-216ENST00000513946 NBPF3Q9H094 633 aa8.59□□□□□ -1.03
PROM1-216ENST00000513946 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
PROM1-216ENST00000513946 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
PROM1-216ENST00000513946 WNT2BQ93097 391 aa8.58□□□□□ -1.04
PROM1-216ENST00000513946 PRSS12P56730 875 aa8.57□□□□□ -1.04
PROM1-216ENST00000513946 CDCA7LQ96GN5 454 aa8.57□□□□□ -1.04
PROM1-216ENST00000513946 PTPN5P54829 565 aa8.56□□□□□ -1.04
PROM1-216ENST00000513946 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
PROM1-216ENST00000513946 GOLGA8CPA6NN73 597 aa8.55□□□□□ -1.04
PROM1-216ENST00000513946 HAP1P54257 671 aaPredicted RBP8.55□□□□□ -1.04
PROM1-216ENST00000513946 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
PROM1-216ENST00000513946 ZFRQ96KR1 1074 aaKnown RBP8.55□□□□□ -1.04
PROM1-216ENST00000513946 SEPT9Q9UHD8 586 aaPredicted RBP8.55□□□□□ -1.04
PROM1-216ENST00000513946 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
PROM1-216ENST00000513946 SEMA3EO15041 775 aa8.53□□□□□ -1.04
PROM1-216ENST00000513946 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
PROM1-216ENST00000513946 SOWAHBA6NEL2 793 aa8.52□□□□□ -1.05
PROM1-216ENST00000513946 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
PROM1-216ENST00000513946 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
PROM1-216ENST00000513946 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
PROM1-216ENST00000513946 SMAPO00193 183 aa8.5□□□□□ -1.05
PROM1-216ENST00000513946 BCAMP50895 628 aa8.5□□□□□ -1.05
PROM1-216ENST00000513946 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
PROM1-216ENST00000513946 TATDN2Q93075 761 aa8.5□□□□□ -1.05
PROM1-216ENST00000513946 TESPA1A2RU30 521 aaPredicted RBP8.48□□□□□ -1.05
PROM1-216ENST00000513946 PTGDRQ13258 359 aa8.48□□□□□ -1.05
PROM1-216ENST00000513946 PADI6Q6TGC4 694 aa8.47□□□□□ -1.05
PROM1-216ENST00000513946 VSIG10Q8N0Z9 540 aa8.47□□□□□ -1.05
PROM1-216ENST00000513946 PNMA3Q9UL41 463 aa8.47□□□□□ -1.05
PROM1-216ENST00000513946 NUDT18Q6ZVK8 323 aa8.46□□□□□ -1.06
PROM1-216ENST00000513946 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
PROM1-216ENST00000513946 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
PROM1-216ENST00000513946 EYA1Q99502 592 aa8.45□□□□□ -1.06
PROM1-216ENST00000513946 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.44□□□□□ -1.06
PROM1-216ENST00000513946 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
PROM1-216ENST00000513946 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
PROM1-216ENST00000513946 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
PROM1-216ENST00000513946 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
PROM1-216ENST00000513946 RBM26Q5T8P6 1007 aaKnown RBP8.41□□□□□ -1.06
PROM1-216ENST00000513946 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
PROM1-216ENST00000513946 NUTM2FA1L443 756 aa8.4□□□□□ -1.06
PROM1-216ENST00000513946 ITGBL1O95965 494 aaPredicted RBP8.4□□□□□ -1.06
PROM1-216ENST00000513946 NYAP1Q6ZVC0 841 aa8.4□□□□□ -1.06
PROM1-216ENST00000513946 GPR37O15354 613 aa8.38□□□□□ -1.07
PROM1-216ENST00000513946 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
PROM1-216ENST00000513946 FCHSD2O94868 740 aa8.37□□□□□ -1.07
PROM1-216ENST00000513946 PPP4CP60510 307 aa8.37□□□□□ -1.07
PROM1-216ENST00000513946 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
PROM1-216ENST00000513946 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
PROM1-216ENST00000513946 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
PROM1-216ENST00000513946 FECHP22830 423 aa8.35□□□□□ -1.07
PROM1-216ENST00000513946 HDGFP51858 240 aaKnown RBP8.33□□□□□ -1.08
PROM1-216ENST00000513946 HIC1Q14526 733 aa8.33□□□□□ -1.08
PROM1-216ENST00000513946 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
PROM1-216ENST00000513946 A0A0G2JS52 829 aa8.32□□□□□ -1.08
PROM1-216ENST00000513946 RCCD1A6NED2 376 aa8.31□□□□□ -1.08
PROM1-216ENST00000513946 APLP1P51693 650 aa8.31□□□□□ -1.08
PROM1-216ENST00000513946 KCNC4Q03721 635 aa8.31□□□□□ -1.08
PROM1-216ENST00000513946 RBM46Q8TBY0 533 aaKnown RBP8.31□□□□□ -1.08
PROM1-216ENST00000513946 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
PROM1-216ENST00000513946 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
PROM1-216ENST00000513946 GNPATO15228 680 aa8.3□□□□□ -1.08
PROM1-216ENST00000513946 DNAJB2P25686 324 aa8.3□□□□□ -1.08
PROM1-216ENST00000513946 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
PROM1-216ENST00000513946 RGS20O76081 388 aa8.27□□□□□ -1.09
PROM1-216ENST00000513946 OATP04181 439 aa8.27□□□□□ -1.09
PROM1-216ENST00000513946 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
PROM1-216ENST00000513946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms