RNA–Protein interactions for RNA: ENST00000513917.5

WDR41-223, Transcript of WD repeat domain 41, human

TSL 4

Gene WDR41, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR41-223	ENST00000513917	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.19	□□□□□ -0.46
WDR41-223	ENST00000513917	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.18	□□□□□ -0.46
WDR41-223	ENST00000513917	EPAS1	Q99814	870 aa		12.18	□□□□□ -0.46
WDR41-223	ENST00000513917	PTPN5	P54829	565 aa		12.16	□□□□□ -0.46
WDR41-223	ENST00000513917	WNT2B	Q93097	391 aa		12.15	□□□□□ -0.46
WDR41-223	ENST00000513917	COL9A1	P20849	921 aa		12.13	□□□□□ -0.47
WDR41-223	ENST00000513917	DDX12P	Q92771	950 aa		12.13	□□□□□ -0.47
WDR41-223	ENST00000513917	WDR70	Q9NW82	654 aa		12.13	□□□□□ -0.47
WDR41-223	ENST00000513917	RABGEF1	Q9UJ41	708 aa		12.13	□□□□□ -0.47
WDR41-223	ENST00000513917	PROX2	Q3B8N5	592 aa		12.12	□□□□□ -0.47
WDR41-223	ENST00000513917	THSD4	Q6ZMP0	1018 aa		12.12	□□□□□ -0.47
WDR41-223	ENST00000513917	E2F4	Q16254	413 aa		12.11	□□□□□ -0.47
WDR41-223	ENST00000513917	PDIA6	Q15084	440 aa		12.1	□□□□□ -0.47
WDR41-223	ENST00000513917	C6orf132	Q5T0Z8	1188 aa		12.1	□□□□□ -0.47
WDR41-223	ENST00000513917	RBM33	Q96EV2	1170 aa	Known RBP	12.1	□□□□□ -0.47
WDR41-223	ENST00000513917	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.09	□□□□□ -0.47
WDR41-223	ENST00000513917	NBR1	Q14596	966 aa		12.08	□□□□□ -0.48
WDR41-223	ENST00000513917	ANKK1	Q8NFD2	765 aa		12.06	□□□□□ -0.48
WDR41-223	ENST00000513917	MAP3K7	O43318	606 aa		12.05	□□□□□ -0.48
WDR41-223	ENST00000513917	LAPTM4B	Q86VI4	370 aa		12.05	□□□□□ -0.48
WDR41-223	ENST00000513917	KIAA1468	Q9P260	1216 aa		12.05	□□□□□ -0.48
WDR41-223	ENST00000513917	ONECUT3	O60422	494 aa	Predicted RBP	12.04	□□□□□ -0.48
WDR41-223	ENST00000513917	EN1	Q05925	392 aa	Predicted RBP	12.03	□□□□□ -0.48
WDR41-223	ENST00000513917	TRIM6-TRIM34	B2RNG4	842 aa		12.01	□□□□□ -0.49
WDR41-223	ENST00000513917	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12	□□□□□ -0.49
WDR41-223	ENST00000513917	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.99	□□□□□ -0.49
WDR41-223	ENST00000513917	TSR1	Q2NL82	804 aa	Known RBP	11.98	□□□□□ -0.49
WDR41-223	ENST00000513917	ZFR	Q96KR1	1074 aa	Known RBP	11.98	□□□□□ -0.49
WDR41-223	ENST00000513917	GRXCR2	A6NFK2	248 aa		11.97	□□□□□ -0.49
WDR41-223	ENST00000513917	SOWAHB	A6NEL2	793 aa		11.96	□□□□□ -0.49
WDR41-223	ENST00000513917	BCAM	P50895	628 aa		11.96	□□□□□ -0.49
WDR41-223	ENST00000513917	FAM98C	Q17RN3	349 aa	Known RBP	11.96	□□□□□ -0.49
WDR41-223	ENST00000513917	PACS2	Q86VP3	889 aa		11.95	□□□□□ -0.5
WDR41-223	ENST00000513917	IFFO2	Q5TF58	517 aa		11.93	□□□□□ -0.5
WDR41-223	ENST00000513917	CERK	Q8TCT0	537 aa		11.93	□□□□□ -0.5
WDR41-223	ENST00000513917	NYAP1	Q6ZVC0	841 aa		11.92	□□□□□ -0.5
WDR41-223	ENST00000513917	LRCH3	Q96II8	777 aa		11.91	□□□□□ -0.5
WDR41-223	ENST00000513917	CDCA7L	Q96GN5	454 aa		11.9	□□□□□ -0.5
WDR41-223	ENST00000513917	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.9	□□□□□ -0.5
WDR41-223	ENST00000513917	TSKS	Q9UJT2	592 aa		11.9	□□□□□ -0.5
WDR41-223	ENST00000513917	PRSS12	P56730	875 aa		11.88	□□□□□ -0.51
WDR41-223	ENST00000513917	WBP1L	Q9NX94	342 aa		11.87	□□□□□ -0.51
WDR41-223	ENST00000513917	OSBP	P22059	807 aa		11.86	□□□□□ -0.51
WDR41-223	ENST00000513917	TSR3	Q9UJK0	312 aa	Known RBP	11.86	□□□□□ -0.51
WDR41-223	ENST00000513917		A0A0G2JS52	829 aa		11.85	□□□□□ -0.51
WDR41-223	ENST00000513917	NBPF26	B4DH59	902 aa		11.85	□□□□□ -0.51
WDR41-223	ENST00000513917	PRIM1	P49642	420 aa	Known RBP	11.85	□□□□□ -0.51
WDR41-223	ENST00000513917	TSHZ2	Q9NRE2	1034 aa		11.85	□□□□□ -0.51
WDR41-223	ENST00000513917	HPS5	Q9UPZ3	1129 aa		11.85	□□□□□ -0.51
WDR41-223	ENST00000513917	RGS20	O76081	388 aa		11.84	□□□□□ -0.51
WDR41-223	ENST00000513917	ITGBL1	O95965	494 aa	Predicted RBP	11.84	□□□□□ -0.51
WDR41-223	ENST00000513917	SMAP	O00193	183 aa		11.82	□□□□□ -0.52
WDR41-223	ENST00000513917	CDHR5	Q9HBB8	845 aa		11.82	□□□□□ -0.52
WDR41-223	ENST00000513917	ARHGEF1	Q92888	912 aa	Known RBP	11.81	□□□□□ -0.52
WDR41-223	ENST00000513917	RBM27	Q9P2N5	1060 aa	Known RBP	11.81	□□□□□ -0.52
WDR41-223	ENST00000513917	PNMA3	Q9UL41	463 aa		11.81	□□□□□ -0.52
WDR41-223	ENST00000513917	TATDN2	Q93075	761 aa		11.8	□□□□□ -0.52
WDR41-223	ENST00000513917	PPP4C	P60510	307 aa		11.79	□□□□□ -0.52
WDR41-223	ENST00000513917	FAM198A	Q9UFP1	575 aa		11.79	□□□□□ -0.52
WDR41-223	ENST00000513917	KCNC4	Q03721	635 aa		11.78	□□□□□ -0.52
WDR41-223	ENST00000513917	SAMD7	Q7Z3H4	446 aa		11.78	□□□□□ -0.52
WDR41-223	ENST00000513917	HDGF	P51858	240 aa	Known RBP	11.77	□□□□□ -0.53
WDR41-223	ENST00000513917	KCNV2	Q8TDN2	545 aa		11.77	□□□□□ -0.53
WDR41-223	ENST00000513917	NUDT18	Q6ZVK8	323 aa		11.76	□□□□□ -0.53
WDR41-223	ENST00000513917	RNF40	O75150	1001 aa		11.74	□□□□□ -0.53
WDR41-223	ENST00000513917	P3H3	Q8IVL6	736 aa		11.74	□□□□□ -0.53
WDR41-223	ENST00000513917	C3orf80	F5H4A9	247 aa		11.72	□□□□□ -0.53
WDR41-223	ENST00000513917	PADI6	Q6TGC4	694 aa		11.72	□□□□□ -0.53
WDR41-223	ENST00000513917	MLLT3	P42568	568 aa	Predicted RBP	11.71	□□□□□ -0.53
WDR41-223	ENST00000513917	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.71	□□□□□ -0.53
WDR41-223	ENST00000513917	TTC13	Q8NBP0	860 aa		11.69	□□□□□ -0.54
WDR41-223	ENST00000513917	NECTIN2	Q92692	538 aa		11.69	□□□□□ -0.54
WDR41-223	ENST00000513917	SLC4A3	P48751	1232 aa		11.68	□□□□□ -0.54
WDR41-223	ENST00000513917	IRX2	Q9BZI1	471 aa	Predicted RBP	11.68	□□□□□ -0.54
WDR41-223	ENST00000513917	SLF2	Q8IX21	1173 aa		11.65	□□□□□ -0.54
WDR41-223	ENST00000513917	SWT1	Q5T5J6	900 aa	Known RBP	11.63	□□□□□ -0.55
WDR41-223	ENST00000513917	NUTM2F	A1L443	756 aa		11.62	□□□□□ -0.55
WDR41-223	ENST00000513917	PTGDR	Q13258	359 aa		11.62	□□□□□ -0.55
WDR41-223	ENST00000513917	MTR	Q99707	1265 aa		11.62	□□□□□ -0.55
WDR41-223	ENST00000513917	IL21	Q9HBE4	155 aa		11.62	□□□□□ -0.55
WDR41-223	ENST00000513917	PLCB2	Q00722	1185 aa		11.61	□□□□□ -0.55
WDR41-223	ENST00000513917	TJAP1	Q5JTD0	557 aa		11.61	□□□□□ -0.55
WDR41-223	ENST00000513917	EYA1	Q99502	592 aa		11.6	□□□□□ -0.55
WDR41-223	ENST00000513917	APLP1	P51693	650 aa		11.59	□□□□□ -0.55
WDR41-223	ENST00000513917	RBM46	Q8TBY0	533 aa	Known RBP	11.58	□□□□□ -0.56
WDR41-223	ENST00000513917	SEMA3E	O15041	775 aa		11.57	□□□□□ -0.56
WDR41-223	ENST00000513917	DNAJB2	P25686	324 aa		11.56	□□□□□ -0.56
WDR41-223	ENST00000513917	PRR14	Q9BWN1	585 aa		11.56	□□□□□ -0.56
WDR41-223	ENST00000513917	FCHSD2	O94868	740 aa		11.55	□□□□□ -0.56
WDR41-223	ENST00000513917	ADGRG1	Q9Y653	693 aa		11.53	□□□□□ -0.56
WDR41-223	ENST00000513917	COPS2	P61201	443 aa		11.52	□□□□□ -0.57
WDR41-223	ENST00000513917	ZNF516	Q92618	1163 aa		11.52	□□□□□ -0.57
WDR41-223	ENST00000513917	SMYD5	Q6GMV2	418 aa		11.51	□□□□□ -0.57
WDR41-223	ENST00000513917	PPP1R18	Q6NYC8	613 aa		11.5	□□□□□ -0.57
WDR41-223	ENST00000513917	TMEM134	Q9H6X4	195 aa		11.5	□□□□□ -0.57
WDR41-223	ENST00000513917	GGCX	P38435	758 aa		11.49	□□□□□ -0.57
WDR41-223	ENST00000513917	RCCD1	A6NED2	376 aa		11.48	□□□□□ -0.57
WDR41-223	ENST00000513917	FAM161A	Q3B820	660 aa		11.48	□□□□□ -0.57
WDR41-223	ENST00000513917	PCDHB3	Q9Y5E6	796 aa		11.48	□□□□□ -0.57
WDR41-223	ENST00000513917	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms