RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
SGCA-209ENST00000513821 PREX1Q8TCU6 1659 aa21.23■□□□□ 0.99
SGCA-209ENST00000513821 DUOX2Q9NRD8 1548 aa21.23■□□□□ 0.99
SGCA-209ENST00000513821 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
SGCA-209ENST00000513821 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
SGCA-209ENST00000513821 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
SGCA-209ENST00000513821 DNMT1P26358 1616 aaKnown RBP21.21■□□□□ 0.99
SGCA-209ENST00000513821 PTPRKQ15262 1439 aa21.2■□□□□ 0.98
SGCA-209ENST00000513821 NCOA1Q15788 1441 aa21.18■□□□□ 0.98
SGCA-209ENST00000513821 ERBINQ96RT1 1412 aa21.17■□□□□ 0.98
SGCA-209ENST00000513821 KDM5DQ9BY66 1539 aa21.16■□□□□ 0.98
SGCA-209ENST00000513821 EIF2AK4Q9P2K8 1649 aaKnown RBP21.15■□□□□ 0.98
SGCA-209ENST00000513821 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
SGCA-209ENST00000513821 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
SGCA-209ENST00000513821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.14■□□□□ 0.97
SGCA-209ENST00000513821 KANK1Q14678 1352 aa21.13■□□□□ 0.97
SGCA-209ENST00000513821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.13■□□□□ 0.97
SGCA-209ENST00000513821 PZPP20742 1482 aa21.12■□□□□ 0.97
SGCA-209ENST00000513821 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
SGCA-209ENST00000513821 ADGRL2O95490 1459 aa21.11■□□□□ 0.97
SGCA-209ENST00000513821 TNRQ92752 1358 aa21.1■□□□□ 0.97
SGCA-209ENST00000513821 PKD2Q13563 968 aa21.07■□□□□ 0.96
SGCA-209ENST00000513821 THEMISQ8N1K5 641 aaPredicted RBP21.07■□□□□ 0.96
SGCA-209ENST00000513821 ABCC3O15438 1527 aa21.06■□□□□ 0.96
SGCA-209ENST00000513821 ITGAEP38570 1179 aa21.06■□□□□ 0.96
SGCA-209ENST00000513821 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
SGCA-209ENST00000513821 ANKRD50Q9ULJ7 1429 aa21.05■□□□□ 0.96
SGCA-209ENST00000513821 A2ML1A8K2U0 1454 aa21.04■□□□□ 0.96
SGCA-209ENST00000513821 ZC3H13Q5T200 1668 aaKnown RBP21.04■□□□□ 0.96
SGCA-209ENST00000513821 PTPRTO14522 1441 aa21.04■□□□□ 0.96
SGCA-209ENST00000513821 ARHGAP31Q2M1Z3 1444 aa21.03■□□□□ 0.96
SGCA-209ENST00000513821 MROH1Q8NDA8 1641 aa21.02■□□□□ 0.96
SGCA-209ENST00000513821 NCKAP5LQ9HCH0 1330 aa21.02■□□□□ 0.95
SGCA-209ENST00000513821 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
SGCA-209ENST00000513821 CEP170BQ9Y4F5 1589 aaPredicted RBP21.01■□□□□ 0.95
SGCA-209ENST00000513821 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
SGCA-209ENST00000513821 STRCQ7RTU9 1775 aa21■□□□□ 0.95
SGCA-209ENST00000513821 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
SGCA-209ENST00000513821 PRDM15P57071 1507 aaPredicted RBP20.99■□□□□ 0.95
SGCA-209ENST00000513821 ANKLE2Q86XL3 938 aa20.99■□□□□ 0.95
SGCA-209ENST00000513821 PLA2R1Q13018 1463 aa20.99■□□□□ 0.95
SGCA-209ENST00000513821 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
SGCA-209ENST00000513821 ZNF142P52746 1687 aaPredicted RBP20.97■□□□□ 0.95
SGCA-209ENST00000513821 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
SGCA-209ENST00000513821 ERVK-7P63135 1459 aa20.96■□□□□ 0.95
SGCA-209ENST00000513821 ILDR1Q86SU0 546 aaPredicted RBP20.96■□□□□ 0.95
SGCA-209ENST00000513821 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
SGCA-209ENST00000513821 SPATA31D1Q6ZQQ2 1576 aa20.95■□□□□ 0.94
SGCA-209ENST00000513821 CERKQ8TCT0 537 aa20.95■□□□□ 0.94
SGCA-209ENST00000513821 CEP152O94986 1710 aa20.95■□□□□ 0.94
SGCA-209ENST00000513821 LMTK2Q8IWU2 1503 aa20.94■□□□□ 0.94
SGCA-209ENST00000513821 FBXO41Q8TF61 875 aa20.94■□□□□ 0.94
SGCA-209ENST00000513821 VWDEQ8N2E2 1590 aa20.92■□□□□ 0.94
SGCA-209ENST00000513821 UGGT1Q9NYU2 1555 aa20.92■□□□□ 0.94
SGCA-209ENST00000513821 STAG3Q9UJ98 1225 aa20.91■□□□□ 0.94
SGCA-209ENST00000513821 SLC52A1Q9NWF4 448 aa20.9■□□□□ 0.94
SGCA-209ENST00000513821 IDI1Q13907 227 aa20.88■□□□□ 0.93
SGCA-209ENST00000513821 NUP155O75694 1391 aa20.87■□□□□ 0.93
SGCA-209ENST00000513821 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
SGCA-209ENST00000513821 RPRD2Q5VT52 1461 aaKnown RBP20.85■□□□□ 0.93
SGCA-209ENST00000513821 TXNDC2Q86VQ3 553 aa20.83■□□□□ 0.93
SGCA-209ENST00000513821 NOS1P29475 1434 aa20.83■□□□□ 0.93
SGCA-209ENST00000513821 EFCAB6Q5THR3 1501 aa20.82■□□□□ 0.92
SGCA-209ENST00000513821 UNC13BO14795 1591 aa20.8■□□□□ 0.92
SGCA-209ENST00000513821 HDGFP51858 240 aaKnown RBP20.8■□□□□ 0.92
SGCA-209ENST00000513821 MED14O60244 1454 aa20.79■□□□□ 0.92
SGCA-209ENST00000513821 TET3O43151 1660 aa20.79■□□□□ 0.92
SGCA-209ENST00000513821 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
SGCA-209ENST00000513821 NPHP4O75161 1426 aaPredicted RBP20.78■□□□□ 0.92
SGCA-209ENST00000513821 NAIPQ13075 1403 aa20.78■□□□□ 0.92
SGCA-209ENST00000513821 LTKP29376 864 aa20.77■□□□□ 0.92
SGCA-209ENST00000513821 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
SGCA-209ENST00000513821 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
SGCA-209ENST00000513821 UBR1Q8IWV7 1749 aa20.75■□□□□ 0.91
SGCA-209ENST00000513821 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
SGCA-209ENST00000513821 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
SGCA-209ENST00000513821 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
SGCA-209ENST00000513821 LTBP4Q8N2S1 1624 aa20.75■□□□□ 0.91
SGCA-209ENST00000513821 SLIT1O75093 1534 aa20.74■□□□□ 0.91
SGCA-209ENST00000513821 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
SGCA-209ENST00000513821 ARHGAP23Q9P227 1491 aa20.74■□□□□ 0.91
SGCA-209ENST00000513821 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
SGCA-209ENST00000513821 SCAF11Q99590 1463 aaKnown RBP20.73■□□□□ 0.91
SGCA-209ENST00000513821 SYNMO15061 1565 aa20.72■□□□□ 0.91
SGCA-209ENST00000513821 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
SGCA-209ENST00000513821 PIK3C2BO00750 1634 aa20.72■□□□□ 0.91
SGCA-209ENST00000513821 CHGAP10645 457 aaKnown RBP20.72■□□□□ 0.91
SGCA-209ENST00000513821 IQSEC2Q5JU85 1478 aa20.72■□□□□ 0.91
SGCA-209ENST00000513821 KDM5AP29375 1690 aaKnown RBP20.71■□□□□ 0.91
SGCA-209ENST00000513821 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.69■□□□□ 0.9
SGCA-209ENST00000513821 E9PCH4 1651 aa20.67■□□□□ 0.9
SGCA-209ENST00000513821 BCANQ96GW7 911 aa20.67■□□□□ 0.9
SGCA-209ENST00000513821 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
SGCA-209ENST00000513821 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
SGCA-209ENST00000513821 ADGRB3O60242 1522 aa20.65■□□□□ 0.9
SGCA-209ENST00000513821 PPP1R15AO75807 674 aaPredicted RBP20.65■□□□□ 0.9
SGCA-209ENST00000513821 CPS1P31327 1500 aa20.64■□□□□ 0.9
SGCA-209ENST00000513821 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
SGCA-209ENST00000513821 RIMS2Q9UQ26 1411 aa20.61■□□□□ 0.89
SGCA-209ENST00000513821 TOM1O60784 492 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms