RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 MFSD10Q14728 455 aa5.94□□□□□ -1.46
SMN1-208ENST00000513228 OXER1Q8TDS5 423 aa5.94□□□□□ -1.46
SMN1-208ENST00000513228 DPYSL4O14531 572 aa5.93□□□□□ -1.46
SMN1-208ENST00000513228 E2F4Q16254 413 aa5.93□□□□□ -1.46
SMN1-208ENST00000513228 PLCB2Q00722 1185 aa5.92□□□□□ -1.46
SMN1-208ENST00000513228 KCNK17Q96T54 332 aa5.91□□□□□ -1.46
SMN1-208ENST00000513228 EMILIN3Q9NT22 766 aa5.91□□□□□ -1.46
SMN1-208ENST00000513228 DDX12PQ92771 950 aa5.88□□□□□ -1.47
SMN1-208ENST00000513228 WNT2BQ93097 391 aa5.88□□□□□ -1.47
SMN1-208ENST00000513228 VPS9D1Q9Y2B5 631 aa5.88□□□□□ -1.47
SMN1-208ENST00000513228 ZDHHC16Q969W1 377 aa5.87□□□□□ -1.47
SMN1-208ENST00000513228 RBM33Q96EV2 1170 aaKnown RBP5.87□□□□□ -1.47
SMN1-208ENST00000513228 GRXCR2A6NFK2 248 aa5.86□□□□□ -1.47
SMN1-208ENST00000513228 GOLGA8CPA6NN73 597 aa5.86□□□□□ -1.47
SMN1-208ENST00000513228 PTPREP23469 700 aa5.86□□□□□ -1.47
SMN1-208ENST00000513228 CAMK2BQ13554 666 aa5.86□□□□□ -1.47
SMN1-208ENST00000513228 JPH4Q96JJ6 628 aa5.86□□□□□ -1.47
SMN1-208ENST00000513228 FOSBP53539 338 aa5.85□□□□□ -1.47
SMN1-208ENST00000513228 NBR1Q14596 966 aa5.85□□□□□ -1.47
SMN1-208ENST00000513228 SPDYE16A6NNV3 312 aaPredicted RBP5.84□□□□□ -1.47
SMN1-208ENST00000513228 POTECB2RU33 542 aa5.84□□□□□ -1.47
SMN1-208ENST00000513228 MAP3K7O43318 606 aa5.84□□□□□ -1.47
SMN1-208ENST00000513228 TYW1BQ6NUM6 668 aa5.84□□□□□ -1.47
SMN1-208ENST00000513228 KDM4FA0A1W2PPD8 638 aa5.83□□□□□ -1.48
SMN1-208ENST00000513228 PHF14O94880 888 aa5.83□□□□□ -1.48
SMN1-208ENST00000513228 ADAM33Q9BZ11 813 aa5.83□□□□□ -1.48
SMN1-208ENST00000513228 ANO8Q9HCE9 1232 aaPredicted RBP5.83□□□□□ -1.48
SMN1-208ENST00000513228 BHMG1C9JSJ3 638 aaPredicted RBP5.82□□□□□ -1.48
SMN1-208ENST00000513228 INSM1Q01101 510 aaPredicted RBP5.82□□□□□ -1.48
SMN1-208ENST00000513228 KCNC4Q03721 635 aa5.82□□□□□ -1.48
SMN1-208ENST00000513228 P3H3Q8IVL6 736 aa5.82□□□□□ -1.48
SMN1-208ENST00000513228 FBXW7Q969H0 707 aa5.82□□□□□ -1.48
SMN1-208ENST00000513228 PRKD2Q9BZL6 878 aa5.82□□□□□ -1.48
SMN1-208ENST00000513228 BCL2L12Q9HB09 334 aa5.82□□□□□ -1.48
SMN1-208ENST00000513228 PCDHGA10Q9Y5H3 936 aa5.82□□□□□ -1.48
SMN1-208ENST00000513228 EPAS1Q99814 870 aa5.81□□□□□ -1.48
SMN1-208ENST00000513228 PDIA6Q15084 440 aa5.8□□□□□ -1.48
SMN1-208ENST00000513228 PDZRN3Q9UPQ7 1066 aa5.8□□□□□ -1.48
SMN1-208ENST00000513228 KCNV2Q8TDN2 545 aa5.79□□□□□ -1.48
SMN1-208ENST00000513228 C6orf132Q5T0Z8 1188 aa5.78□□□□□ -1.48
SMN1-208ENST00000513228 ARHGEF1Q92888 912 aaKnown RBP5.78□□□□□ -1.48
SMN1-208ENST00000513228 SLC4A5Q9BY07 1137 aa5.78□□□□□ -1.48
SMN1-208ENST00000513228 WIPF1O43516 503 aa5.77□□□□□ -1.49
SMN1-208ENST00000513228 MRPL50Q8N5N7 158 aaKnown RBP5.77□□□□□ -1.49
SMN1-208ENST00000513228 PPP1R3GB7ZBB8 358 aa5.76□□□□□ -1.49
SMN1-208ENST00000513228 WFS1O76024 890 aa5.76□□□□□ -1.49
SMN1-208ENST00000513228 PROX2Q3B8N5 592 aa5.76□□□□□ -1.49
SMN1-208ENST00000513228 NBPF3Q9H094 633 aa5.76□□□□□ -1.49
SMN1-208ENST00000513228 V9GY48 417 aaPredicted RBP5.76□□□□□ -1.49
SMN1-208ENST00000513228 COL9A1P20849 921 aa5.75□□□□□ -1.49
SMN1-208ENST00000513228 EN1Q05925 392 aaPredicted RBP5.75□□□□□ -1.49
SMN1-208ENST00000513228 TSR1Q2NL82 804 aaKnown RBP5.75□□□□□ -1.49
SMN1-208ENST00000513228 ZBED2Q9BTP6 218 aa5.75□□□□□ -1.49
SMN1-208ENST00000513228 NUTM2FA1L443 756 aa5.74□□□□□ -1.49
SMN1-208ENST00000513228 MLLT3P42568 568 aaPredicted RBP5.73□□□□□ -1.49
SMN1-208ENST00000513228 PACS2Q86VP3 889 aa5.73□□□□□ -1.49
SMN1-208ENST00000513228 VSIG10Q8N0Z9 540 aa5.73□□□□□ -1.49
SMN1-208ENST00000513228 KIAA1468Q9P260 1216 aa5.73□□□□□ -1.49
SMN1-208ENST00000513228 ARIH1Q9Y4X5 557 aaPredicted RBP5.73□□□□□ -1.49
SMN1-208ENST00000513228 TULP1O00294 542 aaPredicted RBP5.72□□□□□ -1.49
SMN1-208ENST00000513228 SEMA3EO15041 775 aa5.72□□□□□ -1.49
SMN1-208ENST00000513228 MYT1Q01538 1121 aa5.72□□□□□ -1.49
SMN1-208ENST00000513228 SMYD5Q6GMV2 418 aa5.72□□□□□ -1.49
SMN1-208ENST00000513228 SEPT9Q9UHD8 586 aaPredicted RBP5.72□□□□□ -1.49
SMN1-208ENST00000513228 KDM2AQ9Y2K7 1162 aa5.72□□□□□ -1.49
SMN1-208ENST00000513228 RABGEF1Q9UJ41 708 aa5.71□□□□□ -1.5
SMN1-208ENST00000513228 TRIM6-TRIM34B2RNG4 842 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 RNF40O75150 1001 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 OSBPP22059 807 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 NYAP1Q6ZVC0 841 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 ANKK1Q8NFD2 765 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 CERKQ8TCT0 537 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 CDHR5Q9HBB8 845 aa5.7□□□□□ -1.5
SMN1-208ENST00000513228 HDGFP51858 240 aaKnown RBP5.69□□□□□ -1.5
SMN1-208ENST00000513228 CDCA7LQ96GN5 454 aa5.69□□□□□ -1.5
SMN1-208ENST00000513228 NBPF26B4DH59 902 aa5.68□□□□□ -1.5
SMN1-208ENST00000513228 SMAPO00193 183 aa5.68□□□□□ -1.5
SMN1-208ENST00000513228 PRIM1P49642 420 aaKnown RBP5.68□□□□□ -1.5
SMN1-208ENST00000513228 PRSS12P56730 875 aa5.68□□□□□ -1.5
SMN1-208ENST00000513228 PNMA3Q9UL41 463 aa5.68□□□□□ -1.5
SMN1-208ENST00000513228 FAM181BA6NEQ2 426 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 SLC4A3P48751 1232 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 BCAMP50895 628 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 NFX1Q12986 1120 aaKnown RBP5.66□□□□□ -1.5
SMN1-208ENST00000513228 PKDCCQ504Y2 493 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 PADI6Q6TGC4 694 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 LRCH3Q96II8 777 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 ZFRQ96KR1 1074 aaKnown RBP5.66□□□□□ -1.5
SMN1-208ENST00000513228 TSKSQ9UJT2 592 aa5.66□□□□□ -1.5
SMN1-208ENST00000513228 ONECUT3O60422 494 aaPredicted RBP5.65□□□□□ -1.5
SMN1-208ENST00000513228 FAM98CQ17RN3 349 aaKnown RBP5.65□□□□□ -1.5
SMN1-208ENST00000513228 NUDT18Q6ZVK8 323 aa5.65□□□□□ -1.5
SMN1-208ENST00000513228 LAPTM4BQ86VI4 370 aa5.65□□□□□ -1.5
SMN1-208ENST00000513228 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.65□□□□□ -1.5
SMN1-208ENST00000513228 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
SMN1-208ENST00000513228 DGAT1O75907 488 aa5.64□□□□□ -1.51
SMN1-208ENST00000513228 RBM26Q5T8P6 1007 aaKnown RBP5.64□□□□□ -1.51
SMN1-208ENST00000513228 TATDN2Q93075 761 aa5.64□□□□□ -1.51
SMN1-208ENST00000513228 FCHSD2O94868 740 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms