RNA–Protein interactions for RNA: ENST00000513144.1

SERF1B-206, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-206ENST00000513144 KCNK17Q96T54 332 aa11.71□□□□□ -0.53
SERF1B-206ENST00000513144 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
SERF1B-206ENST00000513144 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
SERF1B-206ENST00000513144 EPAS1Q99814 870 aa11.69□□□□□ -0.54
SERF1B-206ENST00000513144 OSBPP22059 807 aa11.68□□□□□ -0.54
SERF1B-206ENST00000513144 PTPREP23469 700 aa11.68□□□□□ -0.54
SERF1B-206ENST00000513144 NBR1Q14596 966 aa11.68□□□□□ -0.54
SERF1B-206ENST00000513144 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
SERF1B-206ENST00000513144 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
SERF1B-206ENST00000513144 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
SERF1B-206ENST00000513144 TESPA1A2RU30 521 aaPredicted RBP11.64□□□□□ -0.55
SERF1B-206ENST00000513144 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
SERF1B-206ENST00000513144 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
SERF1B-206ENST00000513144 TK2O00142 265 aa11.62□□□□□ -0.55
SERF1B-206ENST00000513144 C6orf132Q5T0Z8 1188 aa11.62□□□□□ -0.55
SERF1B-206ENST00000513144 COL9A1P20849 921 aa11.61□□□□□ -0.55
SERF1B-206ENST00000513144 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
SERF1B-206ENST00000513144 ZBED2Q9BTP6 218 aa11.6□□□□□ -0.55
SERF1B-206ENST00000513144 MAP3K7O43318 606 aa11.59□□□□□ -0.55
SERF1B-206ENST00000513144 PPP1R3GB7ZBB8 358 aa11.58□□□□□ -0.56
SERF1B-206ENST00000513144 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
SERF1B-206ENST00000513144 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
SERF1B-206ENST00000513144 HRO43593 1189 aa11.57□□□□□ -0.56
SERF1B-206ENST00000513144 CDHR5Q9HBB8 845 aa11.56□□□□□ -0.56
SERF1B-206ENST00000513144 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
SERF1B-206ENST00000513144 NPDC1Q9NQX5 325 aaPredicted RBP11.53□□□□□ -0.56
SERF1B-206ENST00000513144 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
SERF1B-206ENST00000513144 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
SERF1B-206ENST00000513144 BHMG1C9JSJ3 638 aaPredicted RBP11.49□□□□□ -0.57
SERF1B-206ENST00000513144 STAC3Q96MF2 364 aa11.49□□□□□ -0.57
SERF1B-206ENST00000513144 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
SERF1B-206ENST00000513144 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.57
SERF1B-206ENST00000513144 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.57
SERF1B-206ENST00000513144 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
SERF1B-206ENST00000513144 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
SERF1B-206ENST00000513144 PTGDRQ13258 359 aa11.45□□□□□ -0.58
SERF1B-206ENST00000513144 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
SERF1B-206ENST00000513144 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
SERF1B-206ENST00000513144 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
SERF1B-206ENST00000513144 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
SERF1B-206ENST00000513144 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
SERF1B-206ENST00000513144 PRSS12P56730 875 aa11.43□□□□□ -0.58
SERF1B-206ENST00000513144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
SERF1B-206ENST00000513144 MRPL50Q8N5N7 158 aaKnown RBP11.43□□□□□ -0.58
SERF1B-206ENST00000513144 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
SERF1B-206ENST00000513144 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
SERF1B-206ENST00000513144 GPR37O15354 613 aa11.42□□□□□ -0.58
SERF1B-206ENST00000513144 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
SERF1B-206ENST00000513144 KCTD12Q96CX2 325 aaKnown RBP11.41□□□□□ -0.58
SERF1B-206ENST00000513144 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
SERF1B-206ENST00000513144 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
SERF1B-206ENST00000513144 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
SERF1B-206ENST00000513144 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
SERF1B-206ENST00000513144 FCHSD2O94868 740 aa11.37□□□□□ -0.59
SERF1B-206ENST00000513144 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
SERF1B-206ENST00000513144 FECHP22830 423 aa11.35□□□□□ -0.59
SERF1B-206ENST00000513144 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
SERF1B-206ENST00000513144 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
SERF1B-206ENST00000513144 SMAPO00193 183 aa11.34□□□□□ -0.59
SERF1B-206ENST00000513144 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
SERF1B-206ENST00000513144 WNT2BQ93097 391 aa11.34□□□□□ -0.59
SERF1B-206ENST00000513144 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
SERF1B-206ENST00000513144 PNMA3Q9UL41 463 aa11.33□□□□□ -0.6
SERF1B-206ENST00000513144 HIC1Q14526 733 aa11.32□□□□□ -0.6
SERF1B-206ENST00000513144 TATDN2Q93075 761 aa11.32□□□□□ -0.6
SERF1B-206ENST00000513144 ZFRQ96KR1 1074 aaKnown RBP11.32□□□□□ -0.6
SERF1B-206ENST00000513144 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
SERF1B-206ENST00000513144 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
SERF1B-206ENST00000513144 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
SERF1B-206ENST00000513144 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
SERF1B-206ENST00000513144 GNPATO15228 680 aa11.3□□□□□ -0.6
SERF1B-206ENST00000513144 PTPN5P54829 565 aa11.3□□□□□ -0.6
SERF1B-206ENST00000513144 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
SERF1B-206ENST00000513144 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
SERF1B-206ENST00000513144 BCANQ96GW7 911 aa11.3□□□□□ -0.6
SERF1B-206ENST00000513144 ANKK1Q8NFD2 765 aa11.29□□□□□ -0.6
SERF1B-206ENST00000513144 EYA1Q99502 592 aa11.28□□□□□ -0.6
SERF1B-206ENST00000513144 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
SERF1B-206ENST00000513144 BCAMP50895 628 aa11.26□□□□□ -0.61
SERF1B-206ENST00000513144 SOWAHBA6NEL2 793 aa11.25□□□□□ -0.61
SERF1B-206ENST00000513144 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
SERF1B-206ENST00000513144 IRX2Q9BZI1 471 aaPredicted RBP11.22□□□□□ -0.61
SERF1B-206ENST00000513144 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
SERF1B-206ENST00000513144 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
SERF1B-206ENST00000513144 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
SERF1B-206ENST00000513144 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
SERF1B-206ENST00000513144 ZMYND10O75800 440 aa11.19□□□□□ -0.62
SERF1B-206ENST00000513144 METTL3Q86U44 580 aaKnown RBP11.18□□□□□ -0.62
SERF1B-206ENST00000513144 RBM46Q8TBY0 533 aaKnown RBP11.18□□□□□ -0.62
SERF1B-206ENST00000513144 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
SERF1B-206ENST00000513144 RGS20O76081 388 aa11.17□□□□□ -0.62
SERF1B-206ENST00000513144 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
SERF1B-206ENST00000513144 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
SERF1B-206ENST00000513144 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
SERF1B-206ENST00000513144 HPS5Q9UPZ3 1129 aa11.17□□□□□ -0.62
SERF1B-206ENST00000513144 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
SERF1B-206ENST00000513144 IRF6O14896 467 aa11.16□□□□□ -0.62
SERF1B-206ENST00000513144 OATP04181 439 aa11.16□□□□□ -0.62
SERF1B-206ENST00000513144 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
SERF1B-206ENST00000513144 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms