RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
GYPA-209ENST00000512789 GNPATO15228 680 aa8.39□□□□□ -1.07
GYPA-209ENST00000512789 ZMYND10O75800 440 aa8.38□□□□□ -1.07
GYPA-209ENST00000512789 VARS2Q5ST30 1063 aaKnown RBP8.38□□□□□ -1.07
GYPA-209ENST00000512789 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
GYPA-209ENST00000512789 FAM205CA6NFA0 338 aa8.37□□□□□ -1.07
GYPA-209ENST00000512789 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
GYPA-209ENST00000512789 PBX2P40425 430 aa8.37□□□□□ -1.07
GYPA-209ENST00000512789 PTGDRQ13258 359 aa8.37□□□□□ -1.07
GYPA-209ENST00000512789 BARGINQ6ZT62 677 aa8.37□□□□□ -1.07
GYPA-209ENST00000512789 MARVELD3Q96A59 401 aa8.37□□□□□ -1.07
GYPA-209ENST00000512789 TSR1Q2NL82 804 aaKnown RBP8.36□□□□□ -1.07
GYPA-209ENST00000512789 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
GYPA-209ENST00000512789 POTEB3A0JP26 581 aa8.34□□□□□ -1.07
GYPA-209ENST00000512789 PPP1R3GB7ZBB8 358 aa8.34□□□□□ -1.07
GYPA-209ENST00000512789 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
GYPA-209ENST00000512789 POTEBQ6S5H4 581 aa8.34□□□□□ -1.07
GYPA-209ENST00000512789 ZNF687Q8N1G0 1237 aa8.34□□□□□ -1.07
GYPA-209ENST00000512789 RBM27Q9P2N5 1060 aaKnown RBP8.34□□□□□ -1.07
GYPA-209ENST00000512789 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
GYPA-209ENST00000512789 AK7Q96M32 723 aa8.33□□□□□ -1.08
GYPA-209ENST00000512789 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
GYPA-209ENST00000512789 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
GYPA-209ENST00000512789 HS3ST6Q96QI5 342 aa8.32□□□□□ -1.08
GYPA-209ENST00000512789 CDHR5Q9HBB8 845 aa8.32□□□□□ -1.08
GYPA-209ENST00000512789 PRSS12P56730 875 aa8.31□□□□□ -1.08
GYPA-209ENST00000512789 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
GYPA-209ENST00000512789 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
GYPA-209ENST00000512789 OATP04181 439 aa8.3□□□□□ -1.08
GYPA-209ENST00000512789 NPDC1Q9NQX5 325 aaPredicted RBP8.3□□□□□ -1.08
GYPA-209ENST00000512789 GPR37O15354 613 aa8.29□□□□□ -1.08
GYPA-209ENST00000512789 CDAN1Q8IWY9 1227 aa8.29□□□□□ -1.08
GYPA-209ENST00000512789 CDCA7LQ96GN5 454 aa8.29□□□□□ -1.08
GYPA-209ENST00000512789 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
GYPA-209ENST00000512789 IRF6O14896 467 aa8.28□□□□□ -1.08
GYPA-209ENST00000512789 NBPF26B4DH59 902 aa8.27□□□□□ -1.09
GYPA-209ENST00000512789 PADI6Q6TGC4 694 aa8.27□□□□□ -1.09
GYPA-209ENST00000512789 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
GYPA-209ENST00000512789 PLSCR2Q9NRY7 297 aa8.27□□□□□ -1.09
GYPA-209ENST00000512789 PCDH10Q9P2E7 1040 aa8.27□□□□□ -1.09
GYPA-209ENST00000512789 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
GYPA-209ENST00000512789 COL9A1P20849 921 aa8.26□□□□□ -1.09
GYPA-209ENST00000512789 STAC3Q96MF2 364 aa8.26□□□□□ -1.09
GYPA-209ENST00000512789 SLC4A5Q9BY07 1137 aa8.26□□□□□ -1.09
GYPA-209ENST00000512789 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
GYPA-209ENST00000512789 PSEN2P49810 448 aa8.25□□□□□ -1.09
GYPA-209ENST00000512789 HDGFP51858 240 aaKnown RBP8.24□□□□□ -1.09
GYPA-209ENST00000512789 CCDC102AQ96A19 550 aa8.24□□□□□ -1.09
GYPA-209ENST00000512789 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
GYPA-209ENST00000512789 TK2O00142 265 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 FECHP22830 423 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 SLC4A3P48751 1232 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 ZBED2Q9BTP6 218 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 AXIN2Q9Y2T1 843 aa8.23□□□□□ -1.09
GYPA-209ENST00000512789 TTC13Q8NBP0 860 aa8.22□□□□□ -1.09
GYPA-209ENST00000512789 TRIM66O15016 1216 aa8.21□□□□□ -1.1
GYPA-209ENST00000512789 TATDN2Q93075 761 aa8.21□□□□□ -1.1
GYPA-209ENST00000512789 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
GYPA-209ENST00000512789 PNMA3Q9UL41 463 aa8.21□□□□□ -1.1
GYPA-209ENST00000512789 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
GYPA-209ENST00000512789 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
GYPA-209ENST00000512789 PROX2Q3B8N5 592 aa8.2□□□□□ -1.1
GYPA-209ENST00000512789 NUDT18Q6ZVK8 323 aa8.2□□□□□ -1.1
GYPA-209ENST00000512789 ADGRG1Q9Y653 693 aa8.2□□□□□ -1.1
GYPA-209ENST00000512789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.19□□□□□ -1.1
GYPA-209ENST00000512789 CLCN1P35523 988 aa8.19□□□□□ -1.1
GYPA-209ENST00000512789 NEUROD2Q15784 382 aa8.19□□□□□ -1.1
GYPA-209ENST00000512789 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
GYPA-209ENST00000512789 ANKRD13DQ6ZTN6 518 aa8.19□□□□□ -1.1
GYPA-209ENST00000512789 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
GYPA-209ENST00000512789 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
GYPA-209ENST00000512789 VPS9D1Q9Y2B5 631 aa8.19□□□□□ -1.1
GYPA-209ENST00000512789 GOLGA8CPA6NN73 597 aa8.18□□□□□ -1.1
GYPA-209ENST00000512789 PDE4DQ08499 809 aa8.18□□□□□ -1.1
GYPA-209ENST00000512789 AMHR2Q16671 573 aa8.18□□□□□ -1.1
GYPA-209ENST00000512789 RSPH4AQ5TD94 716 aa8.18□□□□□ -1.1
GYPA-209ENST00000512789 LAPTM4BQ86VI4 370 aa8.18□□□□□ -1.1
GYPA-209ENST00000512789 PXYLP1Q8TE99 480 aa8.18□□□□□ -1.1
GYPA-209ENST00000512789 DNAJB2P25686 324 aa8.17□□□□□ -1.1
GYPA-209ENST00000512789 POTEEQ6S8J3 1075 aa8.17□□□□□ -1.1
GYPA-209ENST00000512789 MRPL50Q8N5N7 158 aaKnown RBP8.17□□□□□ -1.1
GYPA-209ENST00000512789 ADGRD1Q6QNK2 874 aa8.16□□□□□ -1.1
GYPA-209ENST00000512789 FAM98CQ17RN3 349 aaKnown RBP8.15□□□□□ -1.1
GYPA-209ENST00000512789 SULF1Q8IWU6 871 aa8.15□□□□□ -1.1
GYPA-209ENST00000512789 EYA1Q99502 592 aa8.15□□□□□ -1.1
GYPA-209ENST00000512789 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
GYPA-209ENST00000512789 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
GYPA-209ENST00000512789 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
GYPA-209ENST00000512789 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
GYPA-209ENST00000512789 FAM198AQ9UFP1 575 aa8.14□□□□□ -1.11
GYPA-209ENST00000512789 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
GYPA-209ENST00000512789 SPNS2Q8IVW8 549 aa8.12□□□□□ -1.11
GYPA-209ENST00000512789 SMAPO00193 183 aa8.11□□□□□ -1.11
GYPA-209ENST00000512789 BRPF1P55201 1214 aaPredicted RBP8.11□□□□□ -1.11
GYPA-209ENST00000512789 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
GYPA-209ENST00000512789 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
GYPA-209ENST00000512789 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms