RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 ILDR2Q71H61 639 aa23.16■■□□□ 1.3
LETM1-207ENST00000512669 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
LETM1-207ENST00000512669 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.3
LETM1-207ENST00000512669 PZPP20742 1482 aa23.12■■□□□ 1.29
LETM1-207ENST00000512669 UBAP1LF5GYI3 381 aa23.12■■□□□ 1.29
LETM1-207ENST00000512669 CAMSAP2Q08AD1 1489 aa23.11■■□□□ 1.29
LETM1-207ENST00000512669 TNRQ92752 1358 aa23.11■■□□□ 1.29
LETM1-207ENST00000512669 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
LETM1-207ENST00000512669 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
LETM1-207ENST00000512669 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
LETM1-207ENST00000512669 KIF3BO15066 747 aa23.09■■□□□ 1.29
LETM1-207ENST00000512669 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
LETM1-207ENST00000512669 CPS1P31327 1500 aa23.07■■□□□ 1.28
LETM1-207ENST00000512669 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
LETM1-207ENST00000512669 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
LETM1-207ENST00000512669 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
LETM1-207ENST00000512669 TSPY4P0CV99 314 aa23.03■■□□□ 1.28
LETM1-207ENST00000512669 TSPY10P0CW01 314 aa23.03■■□□□ 1.28
LETM1-207ENST00000512669 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
LETM1-207ENST00000512669 FBXO31Q5XUX0 539 aaPredicted RBP23.01■■□□□ 1.27
LETM1-207ENST00000512669 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
LETM1-207ENST00000512669 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
LETM1-207ENST00000512669 ANKLE2Q86XL3 938 aa23■■□□□ 1.27
LETM1-207ENST00000512669 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
LETM1-207ENST00000512669 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
LETM1-207ENST00000512669 UGGT1Q9NYU2 1555 aa22.99■■□□□ 1.27
LETM1-207ENST00000512669 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
LETM1-207ENST00000512669 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
LETM1-207ENST00000512669 TOM1O60784 492 aa22.98■■□□□ 1.27
LETM1-207ENST00000512669 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
LETM1-207ENST00000512669 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
LETM1-207ENST00000512669 MED14O60244 1454 aa22.97■■□□□ 1.27
LETM1-207ENST00000512669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.96■■□□□ 1.27
LETM1-207ENST00000512669 EIF2AK4Q9P2K8 1649 aaKnown RBP22.96■■□□□ 1.27
LETM1-207ENST00000512669 MAP3K1Q13233 1512 aa22.93■■□□□ 1.26
LETM1-207ENST00000512669 NPHP4O75161 1426 aaPredicted RBP22.93■■□□□ 1.26
LETM1-207ENST00000512669 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
LETM1-207ENST00000512669 ABCC3O15438 1527 aa22.92■■□□□ 1.26
LETM1-207ENST00000512669 IQGAP1P46940 1657 aa22.9■■□□□ 1.26
LETM1-207ENST00000512669 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
LETM1-207ENST00000512669 HSPA1LP34931 641 aa22.87■■□□□ 1.25
LETM1-207ENST00000512669 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
LETM1-207ENST00000512669 ERVK-7P63135 1459 aa22.86■■□□□ 1.25
LETM1-207ENST00000512669 SYNMO15061 1565 aa22.84■■□□□ 1.25
LETM1-207ENST00000512669 MED1Q15648 1581 aaPredicted RBP22.84■■□□□ 1.25
LETM1-207ENST00000512669 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
LETM1-207ENST00000512669 DUOX2Q9NRD8 1548 aa22.84■■□□□ 1.25
LETM1-207ENST00000512669 MROH1Q8NDA8 1641 aa22.83■■□□□ 1.25
LETM1-207ENST00000512669 CEP152O94986 1710 aa22.79■■□□□ 1.24
LETM1-207ENST00000512669 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
LETM1-207ENST00000512669 PRDM15P57071 1507 aaPredicted RBP22.78■■□□□ 1.24
LETM1-207ENST00000512669 ARHGAP31Q2M1Z3 1444 aa22.78■■□□□ 1.24
LETM1-207ENST00000512669 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
LETM1-207ENST00000512669 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
LETM1-207ENST00000512669 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
LETM1-207ENST00000512669 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
LETM1-207ENST00000512669 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
LETM1-207ENST00000512669 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
LETM1-207ENST00000512669 SLIT1O75093 1534 aa22.74■■□□□ 1.23
LETM1-207ENST00000512669 KIF15Q9NS87 1388 aa22.74■■□□□ 1.23
LETM1-207ENST00000512669 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
LETM1-207ENST00000512669 APLP2Q06481 763 aa22.73■■□□□ 1.23
LETM1-207ENST00000512669 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
LETM1-207ENST00000512669 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
LETM1-207ENST00000512669 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
LETM1-207ENST00000512669 KANK1Q14678 1352 aa22.68■■□□□ 1.22
LETM1-207ENST00000512669 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
LETM1-207ENST00000512669 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
LETM1-207ENST00000512669 ABCC5O15440 1437 aa22.67■■□□□ 1.22
LETM1-207ENST00000512669 TXNDC2Q86VQ3 553 aa22.67■■□□□ 1.22
LETM1-207ENST00000512669 LTKP29376 864 aa22.64■■□□□ 1.21
LETM1-207ENST00000512669 DAPK1P53355 1430 aa22.64■■□□□ 1.21
LETM1-207ENST00000512669 PIK3C2BO00750 1634 aa22.64■■□□□ 1.21
LETM1-207ENST00000512669 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
LETM1-207ENST00000512669 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
LETM1-207ENST00000512669 RRP7BPQ9NSQ0 103 aa22.63■■□□□ 1.21
LETM1-207ENST00000512669 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
LETM1-207ENST00000512669 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
LETM1-207ENST00000512669 EFCAB6Q5THR3 1501 aa22.61■■□□□ 1.21
LETM1-207ENST00000512669 ANKRD30AQ9BXX3 1397 aa22.61■■□□□ 1.21
LETM1-207ENST00000512669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.212e-8■■■□□ 14.9
LETM1-207ENST00000512669 XIRP1Q702N8 1843 aaKnown RBP22.58■■□□□ 1.21
LETM1-207ENST00000512669 FAM135BQ49AJ0 1406 aa22.55■■□□□ 1.2
LETM1-207ENST00000512669 ADGRB3O60242 1522 aa22.52■■□□□ 1.2
LETM1-207ENST00000512669 NOS1P29475 1434 aa22.52■■□□□ 1.2
LETM1-207ENST00000512669 KCNA6P17658 529 aa22.52■■□□□ 1.2
LETM1-207ENST00000512669 IDI1Q13907 227 aa22.52■■□□□ 1.2
LETM1-207ENST00000512669 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
LETM1-207ENST00000512669 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
LETM1-207ENST00000512669 TET3O43151 1660 aa22.5■■□□□ 1.19
LETM1-207ENST00000512669 ADGRL2O95490 1459 aa22.5■■□□□ 1.19
LETM1-207ENST00000512669 NKTRP30414 1462 aaKnown RBP22.5■■□□□ 1.19
LETM1-207ENST00000512669 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
LETM1-207ENST00000512669 SLC52A1Q9NWF4 448 aa22.5■■□□□ 1.19
LETM1-207ENST00000512669 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
LETM1-207ENST00000512669 NWD1Q149M9 1564 aa22.48■■□□□ 1.19
LETM1-207ENST00000512669 PROSER2Q86WR7 435 aaPredicted RBP22.45■■□□□ 1.18
LETM1-207ENST00000512669 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
LETM1-207ENST00000512669 FAM50AQ14320 339 aaKnown RBP22.44■■□□□ 1.18
LETM1-207ENST00000512669 ROBO1Q9Y6N7 1651 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms