RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 HECW2Q9P2P5 1572 aa34.92■■■■□ 3.18
SPOCK3-221ENST00000512648 MYT1LQ9UL68 1186 aa34.9■■■■□ 3.18
SPOCK3-221ENST00000512648 A2MP01023 1474 aa34.89■■■■□ 3.18
SPOCK3-221ENST00000512648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.89■■■■□ 3.18
SPOCK3-221ENST00000512648 L3MBTL2Q969R5 705 aa34.88■■■■□ 3.17
SPOCK3-221ENST00000512648 ATP10AO60312 1499 aa34.87■■■■□ 3.17
SPOCK3-221ENST00000512648 VWDEQ8N2E2 1590 aa34.87■■■■□ 3.17
SPOCK3-221ENST00000512648 RICTORQ6R327 1708 aa34.85■■■■□ 3.17
SPOCK3-221ENST00000512648 RAPGEF3O95398 923 aa34.84■■■■□ 3.17
SPOCK3-221ENST00000512648 KANK1Q14678 1352 aa34.84■■■■□ 3.17
SPOCK3-221ENST00000512648 PPRC1Q5VV67 1664 aaKnown RBP34.83■■■■□ 3.17
SPOCK3-221ENST00000512648 KIF3BO15066 747 aa34.82■■■■□ 3.16
SPOCK3-221ENST00000512648 PRDM15P57071 1507 aaPredicted RBP34.81■■■■□ 3.16
SPOCK3-221ENST00000512648 ZMYM4Q5VZL5 1548 aa34.78■■■■□ 3.16
SPOCK3-221ENST00000512648 BCORL1Q5H9F3 1711 aa34.78■■■■□ 3.16
SPOCK3-221ENST00000512648 PLA2R1Q13018 1463 aa34.77■■■■□ 3.16
SPOCK3-221ENST00000512648 FRMPD1Q5SYB0 1578 aa34.76■■■■□ 3.16
SPOCK3-221ENST00000512648 DIEXFQ68CQ4 756 aaKnown RBP34.75■■■■□ 3.15
SPOCK3-221ENST00000512648 MROH1Q8NDA8 1641 aa34.75■■■■□ 3.15
SPOCK3-221ENST00000512648 RNF17Q9BXT8 1623 aaKnown RBP34.75■■■■□ 3.15
SPOCK3-221ENST00000512648 ABCA6Q8N139 1617 aa34.74■■■■□ 3.15
SPOCK3-221ENST00000512648 KIF13AQ9H1H9 1805 aa34.74■■■■□ 3.15
SPOCK3-221ENST00000512648 LMTK2Q8IWU2 1503 aa34.73■■■■□ 3.15
SPOCK3-221ENST00000512648 DIP2CQ9Y2E4 1556 aa34.72■■■■□ 3.15
SPOCK3-221ENST00000512648 CCDC144AA2RUR9 1427 aa34.7■■■■□ 3.15
SPOCK3-221ENST00000512648 TET3O43151 1660 aa34.7■■■■□ 3.15
SPOCK3-221ENST00000512648 PTPRTO14522 1441 aa34.69■■■■□ 3.14
SPOCK3-221ENST00000512648 UHRF1BP1Q6BDS2 1440 aa34.63■■■■□ 3.13
SPOCK3-221ENST00000512648 E9PCH4 1651 aa34.62■■■■□ 3.13
SPOCK3-221ENST00000512648 TSPOAP1O95153 1857 aa34.62■■■■□ 3.13
SPOCK3-221ENST00000512648 YEATS2Q9ULM3 1422 aa34.61■■■■□ 3.13
SPOCK3-221ENST00000512648 NBPF8Q3BBV2 869 aa34.59■■■■□ 3.13
SPOCK3-221ENST00000512648 REREQ9P2R6 1566 aa34.58■■■■□ 3.13
SPOCK3-221ENST00000512648 TRPM2O94759 1503 aa34.57■■■■□ 3.13
SPOCK3-221ENST00000512648 EFCAB6Q5THR3 1501 aa34.55■■■■□ 3.12
SPOCK3-221ENST00000512648 COL17A1Q9UMD9 1497 aaPredicted RBP34.51■■■■□ 3.11
SPOCK3-221ENST00000512648 AGLP35573 1532 aa34.49■■■■□ 3.11
SPOCK3-221ENST00000512648 GGT6Q6P531 493 aa34.49■■■■□ 3.11
SPOCK3-221ENST00000512648 NEURL4Q96JN8 1562 aa34.48■■■■□ 3.11
SPOCK3-221ENST00000512648 STAC3Q96MF2 364 aa34.48■■■■□ 3.11
SPOCK3-221ENST00000512648 DNAJC5Q9H3Z4 198 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 PPP6R1Q9UPN7 881 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 SPHKAPQ2M3C7 1700 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 ABCC3O15438 1527 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 SPATA31E1Q6ZUB1 1445 aa34.46■■■■□ 3.11
SPOCK3-221ENST00000512648 EIF4G2P78344 907 aaKnown RBP eCLIP34.46■■■■□ 3.11
SPOCK3-221ENST00000512648 WASHC2CQ9Y4E1 1318 aa34.44■■■■□ 3.1
SPOCK3-221ENST00000512648 ARHGAP31Q2M1Z3 1444 aa34.43■■■■□ 3.1
SPOCK3-221ENST00000512648 DCAF11Q8TEB1 546 aa34.43■■■■□ 3.1
SPOCK3-221ENST00000512648 RALGAPBQ86X10 1494 aa34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 CEP152O94986 1710 aa34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 NPATQ14207 1427 aa34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 ZC3H13Q5T200 1668 aaKnown RBP34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 HSPA5P11021 654 aaKnown RBP34.37■■■■□ 3.09
SPOCK3-221ENST00000512648 CNTLNQ9NXG0 1405 aa34.36■■■■□ 3.09
SPOCK3-221ENST00000512648 CLTCL1P53675 1640 aa34.35■■■■□ 3.09
SPOCK3-221ENST00000512648 ARHGEF40Q8TER5 1519 aa34.35■■■■□ 3.09
SPOCK3-221ENST00000512648 PRAG1Q86YV5 1406 aa34.35■■■■□ 3.09
SPOCK3-221ENST00000512648 RGL3Q3MIN7 710 aa34.33■■■■□ 3.09
SPOCK3-221ENST00000512648 KDM2AQ9Y2K7 1162 aa34.32■■■■□ 3.08
SPOCK3-221ENST00000512648 NOS1P29475 1434 aa34.31■■■■□ 3.08
SPOCK3-221ENST00000512648 CAMSAP1Q5T5Y3 1602 aa34.3■■■■□ 3.08
SPOCK3-221ENST00000512648 HIRIP3Q9BW71 556 aaPredicted RBP34.26■■■■□ 3.07
SPOCK3-221ENST00000512648 ZNF326Q5BKZ1 582 aaKnown RBP34.25■■■■□ 3.07
SPOCK3-221ENST00000512648 GPRASP1Q5JY77 1395 aa34.24■■■■□ 3.07
SPOCK3-221ENST00000512648 TRPM1Q7Z4N2 1603 aa34.18■■■■□ 3.06
SPOCK3-221ENST00000512648 CARD11Q9BXL7 1154 aa34.18■■■■□ 3.06
SPOCK3-221ENST00000512648 USP47Q96K76 1375 aa34.18■■■■□ 3.06
SPOCK3-221ENST00000512648 MIER1Q8N108 512 aa34.16■■■■□ 3.06
SPOCK3-221ENST00000512648 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 SLC52A1Q9NWF4 448 aa34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 UGGT1Q9NYU2 1555 aa34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 ROCK2O75116 1388 aaKnown RBP34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 LAMC1P11047 1609 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 ADGRB3O60242 1522 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 KIF1BO60333 1816 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 RPGRIP1LQ68CZ1 1315 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 MYOM2P54296 1465 aa34.13■■■■□ 3.05
SPOCK3-221ENST00000512648 DDX10Q13206 875 aaKnown RBP34.13■■■■□ 3.05
SPOCK3-221ENST00000512648 PIK3C2BO00750 1634 aa34.12■■■■□ 3.05
SPOCK3-221ENST00000512648 ARID4BQ4LE39 1312 aaPredicted RBP34.1■■■■□ 3.05
SPOCK3-221ENST00000512648 WASHC2AQ641Q2 1341 aa34.1■■■■□ 3.05
SPOCK3-221ENST00000512648 SIGLEC1Q9BZZ2 1709 aa34.1■■■■□ 3.05
SPOCK3-221ENST00000512648 MADDQ8WXG6 1647 aa34.09■■■■□ 3.05
SPOCK3-221ENST00000512648 SYNMO15061 1565 aa34.09■■■■□ 3.05
SPOCK3-221ENST00000512648 CCDC7Q96M83 1385 aa34.06■■■■□ 3.04
SPOCK3-221ENST00000512648 NRXN1Q9ULB1 1477 aa34.04■■■■□ 3.04
SPOCK3-221ENST00000512648 NBPF1Q3BBV0 1214 aa34.04■■■■□ 3.04
SPOCK3-221ENST00000512648 C11orf95C9JLR9 678 aaPredicted RBP34.02■■■■□ 3.04
SPOCK3-221ENST00000512648 PREX1Q8TCU6 1659 aa34.02■■■■□ 3.04
SPOCK3-221ENST00000512648 ERVK-7P63135 1459 aa34.01■■■■□ 3.04
SPOCK3-221ENST00000512648 IFT172Q9UG01 1749 aa34■■■■□ 3.03
SPOCK3-221ENST00000512648 IDI1Q13907 227 aa34■■■■□ 3.03
SPOCK3-221ENST00000512648 KIAA1210Q9ULL0 1709 aa34■■■■□ 3.03
SPOCK3-221ENST00000512648 MROH2AA6NES4 1674 aa33.98■■■■□ 3.03
SPOCK3-221ENST00000512648 KIF7Q2M1P5 1343 aa33.96■■■■□ 3.03
SPOCK3-221ENST00000512648 SPATA31D1Q6ZQQ2 1576 aa33.95■■■■□ 3.03
SPOCK3-221ENST00000512648 CLTCQ00610 1675 aaKnown RBP33.95■■■■□ 3.03
SPOCK3-221ENST00000512648 POLR1AO95602 1720 aaPredicted RBP33.95■■■■□ 3.03
SPOCK3-221ENST00000512648 ST20-MTHFSA0A0A6YYL1 179 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms