RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 KIF7Q2M1P5 1343 aa20.69■□□□□ 0.9
SNCAIP-216ENST00000512146 POLR1AO95602 1720 aaPredicted RBP20.69■□□□□ 0.9
SNCAIP-216ENST00000512146 KDM5CP41229 1560 aa20.68■□□□□ 0.9
SNCAIP-216ENST00000512146 AFAP1Q8N556 730 aa20.67■□□□□ 0.9
SNCAIP-216ENST00000512146 ARID4BQ4LE39 1312 aaPredicted RBP20.67■□□□□ 0.9
SNCAIP-216ENST00000512146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNCAIP-216ENST00000512146 INO80Q9ULG1 1556 aaPredicted RBP20.65■□□□□ 0.9
SNCAIP-216ENST00000512146 ZNF326Q5BKZ1 582 aaKnown RBP20.63■□□□□ 0.89
SNCAIP-216ENST00000512146 DCAF11Q8TEB1 546 aa20.63■□□□□ 0.89
SNCAIP-216ENST00000512146 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
SNCAIP-216ENST00000512146 ATP7AQ04656 1500 aa20.62■□□□□ 0.89
SNCAIP-216ENST00000512146 PRAG1Q86YV5 1406 aa20.62■□□□□ 0.89
SNCAIP-216ENST00000512146 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
SNCAIP-216ENST00000512146 DEPDC5O75140 1603 aa20.61■□□□□ 0.89
SNCAIP-216ENST00000512146 BCORL1Q5H9F3 1711 aa20.6■□□□□ 0.89
SNCAIP-216ENST00000512146 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
SNCAIP-216ENST00000512146 A2MP01023 1474 aa20.59■□□□□ 0.89
SNCAIP-216ENST00000512146 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNCAIP-216ENST00000512146 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
SNCAIP-216ENST00000512146 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
SNCAIP-216ENST00000512146 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
SNCAIP-216ENST00000512146 VWDEQ8N2E2 1590 aa20.57■□□□□ 0.88
SNCAIP-216ENST00000512146 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
SNCAIP-216ENST00000512146 PTPRTO14522 1441 aa20.56■□□□□ 0.88
SNCAIP-216ENST00000512146 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
SNCAIP-216ENST00000512146 EIF2AK4Q9P2K8 1649 aaKnown RBP20.54■□□□□ 0.88
SNCAIP-216ENST00000512146 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
SNCAIP-216ENST00000512146 TRPM2O94759 1503 aa20.53■□□□□ 0.88
SNCAIP-216ENST00000512146 LAMC1P11047 1609 aa20.52■□□□□ 0.88
SNCAIP-216ENST00000512146 E9PCH4 1651 aa20.52■□□□□ 0.87
SNCAIP-216ENST00000512146 ZNF518AQ6AHZ1 1483 aa20.51■□□□□ 0.87
SNCAIP-216ENST00000512146 CD109Q6YHK3 1445 aa20.51■□□□□ 0.87
SNCAIP-216ENST00000512146 PRDM15P57071 1507 aaPredicted RBP20.51■□□□□ 0.87
SNCAIP-216ENST00000512146 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
SNCAIP-216ENST00000512146 TET3O43151 1660 aa20.5■□□□□ 0.87
SNCAIP-216ENST00000512146 ST20-MTHFSA0A0A6YYL1 179 aa20.5■□□□□ 0.87
SNCAIP-216ENST00000512146 KANK1Q14678 1352 aa20.49■□□□□ 0.87
SNCAIP-216ENST00000512146 CFAP74Q9C0B2 1584 aa20.49■□□□□ 0.87
SNCAIP-216ENST00000512146 MROH1Q8NDA8 1641 aa20.48■□□□□ 0.87
SNCAIP-216ENST00000512146 KIDINS220Q9ULH0 1771 aa20.47■□□□□ 0.87
SNCAIP-216ENST00000512146 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
SNCAIP-216ENST00000512146 POGZQ7Z3K3 1410 aa20.47■□□□□ 0.87
SNCAIP-216ENST00000512146 KIF3BO15066 747 aa20.46■□□□□ 0.87
SNCAIP-216ENST00000512146 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
SNCAIP-216ENST00000512146 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
SNCAIP-216ENST00000512146 NEURL4Q96JN8 1562 aa20.45■□□□□ 0.86
SNCAIP-216ENST00000512146 NBPF1Q3BBV0 1214 aa20.45■□□□□ 0.86
SNCAIP-216ENST00000512146 CCDC184Q52MB2 194 aa20.44■□□□□ 0.86
SNCAIP-216ENST00000512146 SPHKAPQ2M3C7 1700 aa20.43■□□□□ 0.86
SNCAIP-216ENST00000512146 LMTK2Q8IWU2 1503 aa20.43■□□□□ 0.86
SNCAIP-216ENST00000512146 NEO1Q92859 1461 aa20.42■□□□□ 0.86
SNCAIP-216ENST00000512146 CLTCL1P53675 1640 aa20.4■□□□□ 0.86
SNCAIP-216ENST00000512146 RNF17Q9BXT8 1623 aaKnown RBP20.4■□□□□ 0.86
SNCAIP-216ENST00000512146 CEP152O94986 1710 aa20.39■□□□□ 0.85
SNCAIP-216ENST00000512146 MRS2Q9HD23 443 aa20.39■□□□□ 0.85
SNCAIP-216ENST00000512146 EFCAB6Q5THR3 1501 aa20.39■□□□□ 0.85
SNCAIP-216ENST00000512146 TESK2Q96S53 571 aa20.38■□□□□ 0.85
SNCAIP-216ENST00000512146 MYT1LQ9UL68 1186 aa20.38■□□□□ 0.85
SNCAIP-216ENST00000512146 MADDQ8WXG6 1647 aa20.38■□□□□ 0.85
SNCAIP-216ENST00000512146 HNRNPUQ00839 825 aaKnown RBP eCLIP20.37■□□□□ 0.85
SNCAIP-216ENST00000512146 FRMPD1Q5SYB0 1578 aa20.37■□□□□ 0.85
SNCAIP-216ENST00000512146 COL17A1Q9UMD9 1497 aaPredicted RBP20.36■□□□□ 0.85
SNCAIP-216ENST00000512146 KTN1Q86UP2 1357 aaKnown RBP20.35■□□□□ 0.85
SNCAIP-216ENST00000512146 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
SNCAIP-216ENST00000512146 POLR3GLQ9BT43 218 aa20.35■□□□□ 0.85
SNCAIP-216ENST00000512146 PPRC1Q5VV67 1664 aaKnown RBP20.31■□□□□ 0.84
SNCAIP-216ENST00000512146 GLI2P10070 1586 aa20.3■□□□□ 0.84
SNCAIP-216ENST00000512146 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
SNCAIP-216ENST00000512146 MYOM2P54296 1465 aa20.29■□□□□ 0.84
SNCAIP-216ENST00000512146 DISP3Q9P2K9 1392 aa20.28■□□□□ 0.84
SNCAIP-216ENST00000512146 ABCA6Q8N139 1617 aa20.28■□□□□ 0.84
SNCAIP-216ENST00000512146 MAP3K4Q9Y6R4 1608 aa20.28■□□□□ 0.84
SNCAIP-216ENST00000512146 RALBP1Q15311 655 aa20.27■□□□□ 0.84
SNCAIP-216ENST00000512146 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.84
SNCAIP-216ENST00000512146 IQGAP1P46940 1657 aa20.27■□□□□ 0.84
SNCAIP-216ENST00000512146 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.84
SNCAIP-216ENST00000512146 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
SNCAIP-216ENST00000512146 KIAA1210Q9ULL0 1709 aa20.26■□□□□ 0.83
SNCAIP-216ENST00000512146 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
SNCAIP-216ENST00000512146 WASHC2CQ9Y4E1 1318 aa20.26■□□□□ 0.83
SNCAIP-216ENST00000512146 TMF1P82094 1093 aa20.25■□□□□ 0.83
SNCAIP-216ENST00000512146 UGGT1Q9NYU2 1555 aa20.25■□□□□ 0.83
SNCAIP-216ENST00000512146 NPATQ14207 1427 aa20.25■□□□□ 0.83
SNCAIP-216ENST00000512146 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
SNCAIP-216ENST00000512146 RAPGEF3O95398 923 aa20.23■□□□□ 0.83
SNCAIP-216ENST00000512146 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
SNCAIP-216ENST00000512146 ABCC3O15438 1527 aa20.23■□□□□ 0.83
SNCAIP-216ENST00000512146 FKBP8Q14318 412 aa20.23■□□□□ 0.83
SNCAIP-216ENST00000512146 DIP2CQ9Y2E4 1556 aa20.22■□□□□ 0.83
SNCAIP-216ENST00000512146 MYBBP1AQ9BQG0 1328 aaKnown RBP20.22■□□□□ 0.83
SNCAIP-216ENST00000512146 PARD3Q8TEW0 1356 aa20.22■□□□□ 0.83
SNCAIP-216ENST00000512146 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
SNCAIP-216ENST00000512146 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
SNCAIP-216ENST00000512146 ADGRB3O60242 1522 aa20.22■□□□□ 0.83
SNCAIP-216ENST00000512146 RICTORQ6R327 1708 aa20.21■□□□□ 0.83
SNCAIP-216ENST00000512146 NEFLP07196 543 aa20.2■□□□□ 0.82
SNCAIP-216ENST00000512146 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
SNCAIP-216ENST00000512146 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
SNCAIP-216ENST00000512146 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
SNCAIP-216ENST00000512146 KIF1BO60333 1816 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms