RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.03
SUB1-210ENST00000511988 MLECQ14165 292 aa15.26■□□□□ 0.03
SUB1-210ENST00000511988 DUOX2Q9NRD8 1548 aa15.26■□□□□ 0.03
SUB1-210ENST00000511988 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
SUB1-210ENST00000511988 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
SUB1-210ENST00000511988 ARHGEF40Q8TER5 1519 aa15.25■□□□□ 0.03
SUB1-210ENST00000511988 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
SUB1-210ENST00000511988 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
SUB1-210ENST00000511988 CHIC2Q9UKJ5 165 aa15.24■□□□□ 0.03
SUB1-210ENST00000511988 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
SUB1-210ENST00000511988 EIF2AK4Q9P2K8 1649 aaKnown RBP15.23■□□□□ 0.03
SUB1-210ENST00000511988 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
SUB1-210ENST00000511988 PTPRTO14522 1441 aa15.22■□□□□ 0.03
SUB1-210ENST00000511988 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
SUB1-210ENST00000511988 PREX1Q8TCU6 1659 aa15.22■□□□□ 0.03
SUB1-210ENST00000511988 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.02
SUB1-210ENST00000511988 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
SUB1-210ENST00000511988 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
SUB1-210ENST00000511988 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
SUB1-210ENST00000511988 CEBPAP49715 358 aaPredicted RBP15.19■□□□□ 0.02
SUB1-210ENST00000511988 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
SUB1-210ENST00000511988 UNC13BO14795 1591 aa15.18■□□□□ 0.02
SUB1-210ENST00000511988 A2MP01023 1474 aa15.17■□□□□ 0.02
SUB1-210ENST00000511988 HRCP23327 699 aa15.17■□□□□ 0.02
SUB1-210ENST00000511988 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
SUB1-210ENST00000511988 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
SUB1-210ENST00000511988 FER1L4A9Z1Z3 1794 aa15.16■□□□□ 0.02
SUB1-210ENST00000511988 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
SUB1-210ENST00000511988 HSPA1LP34931 641 aa15.15■□□□□ 0.02
SUB1-210ENST00000511988 MYT1LQ9UL68 1186 aa15.15■□□□□ 0.02
SUB1-210ENST00000511988 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
SUB1-210ENST00000511988 DHX29Q7Z478 1369 aaKnown RBP15.14■□□□□ 0.01
SUB1-210ENST00000511988 KDM5DQ9BY66 1539 aa15.14■□□□□ 0.01
SUB1-210ENST00000511988 ATP10AO60312 1499 aa15.14■□□□□ 0.01
SUB1-210ENST00000511988 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
SUB1-210ENST00000511988 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
SUB1-210ENST00000511988 AGLP35573 1532 aa15.12■□□□□ 0.01
SUB1-210ENST00000511988 IQGAP3Q86VI3 1631 aa15.1■□□□□ 0.01
SUB1-210ENST00000511988 MROH1Q8NDA8 1641 aa15.09■□□□□ 0.01
SUB1-210ENST00000511988 FAM135AQ9P2D6 1515 aa15.08■□□□□ 0.01
SUB1-210ENST00000511988 ZNF335Q9H4Z2 1342 aaPredicted RBP15.08■□□□□ 0
SUB1-210ENST00000511988 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
SUB1-210ENST00000511988 VWDEQ8N2E2 1590 aa15.07■□□□□ 0
SUB1-210ENST00000511988 PIP4K2BP78356 416 aa15.06■□□□□ 0
SUB1-210ENST00000511988 PZPP20742 1482 aa15.05■□□□□ -0
SUB1-210ENST00000511988 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
SUB1-210ENST00000511988 TET3O43151 1660 aa15.03■□□□□ -0
SUB1-210ENST00000511988 KANK1Q14678 1352 aa15.03■□□□□ -0
SUB1-210ENST00000511988 LMTK2Q8IWU2 1503 aa15.02■□□□□ -0
SUB1-210ENST00000511988 NUP155O75694 1391 aa15.02■□□□□ -0
SUB1-210ENST00000511988 KIF3BO15066 747 aa15.02■□□□□ -0
SUB1-210ENST00000511988 CEP152O94986 1710 aa15.01□□□□□ -0.01
SUB1-210ENST00000511988 TRIM52Q96A61 297 aa15.01□□□□□ -0.01
SUB1-210ENST00000511988 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
SUB1-210ENST00000511988 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
SUB1-210ENST00000511988 ABCC3O15438 1527 aa14.99□□□□□ -0.01
SUB1-210ENST00000511988 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
SUB1-210ENST00000511988 CCER1Q8TC90 406 aaPredicted RBP14.97□□□□□ -0.01
SUB1-210ENST00000511988 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
SUB1-210ENST00000511988 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
SUB1-210ENST00000511988 E9PCH4 1651 aa14.96□□□□□ -0.01
SUB1-210ENST00000511988 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
SUB1-210ENST00000511988 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
SUB1-210ENST00000511988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
SUB1-210ENST00000511988 RPRD2Q5VT52 1461 aaKnown RBP14.95□□□□□ -0.02
SUB1-210ENST00000511988 MROH2AA6NES4 1674 aa14.94□□□□□ -0.02
SUB1-210ENST00000511988 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
SUB1-210ENST00000511988 CLTCQ00610 1675 aaKnown RBP14.93□□□□□ -0.02
SUB1-210ENST00000511988 SPHKAPQ2M3C7 1700 aa14.93□□□□□ -0.02
SUB1-210ENST00000511988 TOM1O60784 492 aa14.93□□□□□ -0.02
SUB1-210ENST00000511988 RGS17Q9UGC6 210 aaPredicted RBP14.93□□□□□ -0.02
SUB1-210ENST00000511988 GGT6Q6P531 493 aa14.92□□□□□ -0.02
SUB1-210ENST00000511988 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
SUB1-210ENST00000511988 ARHGAP31Q2M1Z3 1444 aa14.91□□□□□ -0.02
SUB1-210ENST00000511988 PKD2Q13563 968 aa14.9□□□□□ -0.02
SUB1-210ENST00000511988 TRPM2O94759 1503 aa14.9□□□□□ -0.02
SUB1-210ENST00000511988 WASHC2CQ9Y4E1 1318 aa14.9□□□□□ -0.02
SUB1-210ENST00000511988 NPATQ14207 1427 aa14.88□□□□□ -0.03
SUB1-210ENST00000511988 ANKRD30BQ9BXX2 1392 aa14.87□□□□□ -0.03
SUB1-210ENST00000511988 C3P01024 1663 aa14.87□□□□□ -0.03
SUB1-210ENST00000511988 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
SUB1-210ENST00000511988 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
SUB1-210ENST00000511988 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
SUB1-210ENST00000511988 NOS1P29475 1434 aa14.83□□□□□ -0.04
SUB1-210ENST00000511988 ERVK-7P63135 1459 aa14.82□□□□□ -0.04
SUB1-210ENST00000511988 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
SUB1-210ENST00000511988 PIK3C2BO00750 1634 aa14.82□□□□□ -0.04
SUB1-210ENST00000511988 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
SUB1-210ENST00000511988 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
SUB1-210ENST00000511988 SYNMO15061 1565 aa14.81□□□□□ -0.04
SUB1-210ENST00000511988 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
SUB1-210ENST00000511988 ZEB1P37275 1124 aaPredicted RBP14.8□□□□□ -0.04
SUB1-210ENST00000511988 KIF1BO60333 1816 aa14.79□□□□□ -0.04
SUB1-210ENST00000511988 CFAP65Q6ZU64 1925 aaKnown RBP14.78□□□□□ -0.04
SUB1-210ENST00000511988 ZMYM3Q14202 1370 aa14.78□□□□□ -0.04
SUB1-210ENST00000511988 SETD1AO15047 1707 aaKnown RBP14.76□□□□□ -0.05
SUB1-210ENST00000511988 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
SUB1-210ENST00000511988 UGGT1Q9NYU2 1555 aa14.76□□□□□ -0.05
SUB1-210ENST00000511988 ADGRB3O60242 1522 aa14.76□□□□□ -0.05
SUB1-210ENST00000511988 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms