RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 E2F4Q16254 413 aa12.23□□□□□ -0.45
NR1I3-229ENST00000511748 ABCA5Q8WWZ7 1642 aa12.21□□□□□ -0.46
NR1I3-229ENST00000511748 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
NR1I3-229ENST00000511748 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
NR1I3-229ENST00000511748 NUP160Q12769 1436 aa12.17□□□□□ -0.46
NR1I3-229ENST00000511748 SLC34A2O95436 690 aa12.16□□□□□ -0.46
NR1I3-229ENST00000511748 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
NR1I3-229ENST00000511748 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
NR1I3-229ENST00000511748 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
NR1I3-229ENST00000511748 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
NR1I3-229ENST00000511748 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
NR1I3-229ENST00000511748 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
NR1I3-229ENST00000511748 FHAD1B1AJZ9 1412 aa12.13□□□□□ -0.47
NR1I3-229ENST00000511748 DPYSL4O14531 572 aa12.13□□□□□ -0.47
NR1I3-229ENST00000511748 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-229ENST00000511748 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-229ENST00000511748 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
NR1I3-229ENST00000511748 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
NR1I3-229ENST00000511748 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
NR1I3-229ENST00000511748 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
NR1I3-229ENST00000511748 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
NR1I3-229ENST00000511748 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
NR1I3-229ENST00000511748 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
NR1I3-229ENST00000511748 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
NR1I3-229ENST00000511748 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
NR1I3-229ENST00000511748 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
NR1I3-229ENST00000511748 SNPHO15079 494 aa12.07□□□□□ -0.48
NR1I3-229ENST00000511748 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-229ENST00000511748 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
NR1I3-229ENST00000511748 MAPKBP1O60336 1514 aa12.05□□□□□ -0.48
NR1I3-229ENST00000511748 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
NR1I3-229ENST00000511748 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
NR1I3-229ENST00000511748 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
NR1I3-229ENST00000511748 ST18O60284 1047 aa12.04□□□□□ -0.48
NR1I3-229ENST00000511748 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-229ENST00000511748 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
NR1I3-229ENST00000511748 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-229ENST00000511748 NUDT7P0C024 238 aa12.02□□□□□ -0.49
NR1I3-229ENST00000511748 PDIA6Q15084 440 aa12.02□□□□□ -0.49
NR1I3-229ENST00000511748 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
NR1I3-229ENST00000511748 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
NR1I3-229ENST00000511748 EVI5O60447 810 aa12.01□□□□□ -0.49
NR1I3-229ENST00000511748 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-229ENST00000511748 RIMBP2O15034 1052 aa12□□□□□ -0.49
NR1I3-229ENST00000511748 SEMA3EO15041 775 aa12□□□□□ -0.49
NR1I3-229ENST00000511748 FAM69CQ0P6D2 419 aa12□□□□□ -0.49
NR1I3-229ENST00000511748 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
NR1I3-229ENST00000511748 TBC1D12O60347 775 aa11.99□□□□□ -0.49
NR1I3-229ENST00000511748 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
NR1I3-229ENST00000511748 KDM6BO15054 1643 aa11.97□□□□□ -0.49
NR1I3-229ENST00000511748 RUSC2Q8N2Y8 1516 aa11.96□□□□□ -0.49
NR1I3-229ENST00000511748 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
NR1I3-229ENST00000511748 MLLT3P42568 568 aaPredicted RBP11.95□□□□□ -0.5
NR1I3-229ENST00000511748 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
NR1I3-229ENST00000511748 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
NR1I3-229ENST00000511748 KIAA0586Q9BVV6 1533 aa11.92□□□□□ -0.5
NR1I3-229ENST00000511748 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-229ENST00000511748 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
NR1I3-229ENST00000511748 DDX12PQ92771 950 aa11.91□□□□□ -0.5
NR1I3-229ENST00000511748 PTGER2P43116 358 aa11.9□□□□□ -0.5
NR1I3-229ENST00000511748 NBR1Q14596 966 aa11.9□□□□□ -0.5
NR1I3-229ENST00000511748 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
NR1I3-229ENST00000511748 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
NR1I3-229ENST00000511748 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
NR1I3-229ENST00000511748 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
NR1I3-229ENST00000511748 CUL7Q14999 1698 aa11.87□□□□□ -0.51
NR1I3-229ENST00000511748 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
NR1I3-229ENST00000511748 BCANQ96GW7 911 aa11.87□□□□□ -0.51
NR1I3-229ENST00000511748 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
NR1I3-229ENST00000511748 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
NR1I3-229ENST00000511748 FOSBP53539 338 aa11.85□□□□□ -0.51
NR1I3-229ENST00000511748 EMP3P54852 163 aa11.85□□□□□ -0.51
NR1I3-229ENST00000511748 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
NR1I3-229ENST00000511748 GLI2P10070 1586 aa11.84□□□□□ -0.51
NR1I3-229ENST00000511748 OSBPP22059 807 aa11.84□□□□□ -0.51
NR1I3-229ENST00000511748 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
NR1I3-229ENST00000511748 PTPRGP23470 1445 aa11.84□□□□□ -0.51
NR1I3-229ENST00000511748 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
NR1I3-229ENST00000511748 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
NR1I3-229ENST00000511748 ZNF454Q8N9F8 522 aa11.83□□□□□ -0.52
NR1I3-229ENST00000511748 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
NR1I3-229ENST00000511748 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
NR1I3-229ENST00000511748 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
NR1I3-229ENST00000511748 PHF14O94880 888 aa11.81□□□□□ -0.52
NR1I3-229ENST00000511748 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
NR1I3-229ENST00000511748 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
NR1I3-229ENST00000511748 ERBB3P21860 1342 aa11.81□□□□□ -0.52
NR1I3-229ENST00000511748 IGF1RP08069 1367 aa11.8□□□□□ -0.52
NR1I3-229ENST00000511748 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
NR1I3-229ENST00000511748 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
NR1I3-229ENST00000511748 ASXL2Q76L83 1435 aa11.78□□□□□ -0.52
NR1I3-229ENST00000511748 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
NR1I3-229ENST00000511748 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
NR1I3-229ENST00000511748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
NR1I3-229ENST00000511748 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
NR1I3-229ENST00000511748 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
NR1I3-229ENST00000511748 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
NR1I3-229ENST00000511748 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
NR1I3-229ENST00000511748 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
NR1I3-229ENST00000511748 EPAS1Q99814 870 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms