RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PLB1Q6P1J6 1458 aa6.29□□□□□ -1.4
PTPN13-209ENST00000511467 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
PTPN13-209ENST00000511467 OSCARQ8IYS5 282 aa6.29□□□□□ -1.4
PTPN13-209ENST00000511467 LAMC1P11047 1609 aa6.29□□□□□ -1.4
PTPN13-209ENST00000511467 FGD6Q6ZV73 1430 aa6.29□□□□□ -1.4
PTPN13-209ENST00000511467 CGNL1Q0VF96 1302 aa6.28□□□□□ -1.4
PTPN13-209ENST00000511467 DUOX2Q9NRD8 1548 aa6.28□□□□□ -1.4
PTPN13-209ENST00000511467 TRIM44Q96DX7 344 aaPredicted RBP6.28□□□□□ -1.4
PTPN13-209ENST00000511467 DHX57Q6P158 1386 aaKnown RBP6.28□□□□□ -1.4
PTPN13-209ENST00000511467 ZC3H13Q5T200 1668 aaKnown RBP6.28□□□□□ -1.4
PTPN13-209ENST00000511467 CT47B1P0C2W7 299 aaPredicted RBP6.28□□□□□ -1.4
PTPN13-209ENST00000511467 TMX4Q9H1E5 349 aaPredicted RBP6.28□□□□□ -1.4
PTPN13-209ENST00000511467 GTF3C3Q9Y5Q9 886 aa6.28□□□□□ -1.4
PTPN13-209ENST00000511467 ADCY10Q96PN6 1610 aa6.27□□□□□ -1.4
PTPN13-209ENST00000511467 HMGB1P09429 215 aaKnown RBP6.27□□□□□ -1.41
PTPN13-209ENST00000511467 FTSJ3Q8IY81 847 aaKnown RBP6.27□□□□□ -1.41
PTPN13-209ENST00000511467 CDC42BPAQ5VT25 1732 aa6.27□□□□□ -1.41
PTPN13-209ENST00000511467 KDM5AP29375 1690 aaKnown RBP6.27□□□□□ -1.41
PTPN13-209ENST00000511467 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
PTPN13-209ENST00000511467 POGKQ9P215 609 aa6.27□□□□□ -1.41
PTPN13-209ENST00000511467 ARHGEF12Q9NZN5 1544 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 CHD1O14646 1710 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 CCDC136Q96JN2 1154 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 PKNOX2Q96KN3 472 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 HMMRO75330 724 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 SYAP1Q96A49 352 aaPredicted RBP6.26□□□□□ -1.41
PTPN13-209ENST00000511467 CARD11Q9BXL7 1154 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 SAMD9Q5K651 1589 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 ARHGEF5Q12774 1597 aa6.26□□□□□ -1.41
PTPN13-209ENST00000511467 DNMT1P26358 1616 aaKnown RBP6.26□□□□□ -1.41
PTPN13-209ENST00000511467 PHF14O94880 888 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 SLC52A1Q9NWF4 448 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 JPH4Q96JJ6 628 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 GRIN2AQ12879 1464 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 ARAP3Q8WWN8 1544 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 EVC2Q86UK5 1308 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 SMC4Q9NTJ3 1288 aa6.25□□□□□ -1.41
PTPN13-209ENST00000511467 MRS2Q9HD23 443 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 KIAA0556O60303 1618 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 KIAA1210Q9ULL0 1709 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 ITSN1Q15811 1721 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 PCF11O94913 1555 aaKnown RBP6.24□□□□□ -1.41
PTPN13-209ENST00000511467 RAD54L2Q9Y4B4 1467 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 NUP160Q12769 1436 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 NUP155O75694 1391 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 EIF4G3O43432 1585 aaKnown RBP6.24□□□□□ -1.41
PTPN13-209ENST00000511467 RTEL1-TNFRSF6BF6WH68 1400 aa6.24□□□□□ -1.41
PTPN13-209ENST00000511467 PLXNC1O60486 1568 aa6.23□□□□□ -1.41
PTPN13-209ENST00000511467 TNNT2P45379 298 aaPredicted RBP6.23□□□□□ -1.41
PTPN13-209ENST00000511467 PMFBP1Q8TBY8 1022 aa6.23□□□□□ -1.41
PTPN13-209ENST00000511467 CROCC2H7BZ55 1655 aa6.23□□□□□ -1.41
PTPN13-209ENST00000511467 CENPJQ9HC77 1338 aaPredicted RBP6.23□□□□□ -1.41
PTPN13-209ENST00000511467 CHAF1AQ13111 956 aaPredicted RBP6.23□□□□□ -1.41
PTPN13-209ENST00000511467 ERBINQ96RT1 1412 aa6.23□□□□□ -1.41
PTPN13-209ENST00000511467 SMG6Q86US8 1419 aaKnown RBP6.22□□□□□ -1.41
PTPN13-209ENST00000511467 ABCC2Q92887 1545 aa6.22□□□□□ -1.41
PTPN13-209ENST00000511467 NLRP13Q86W25 1043 aa6.22□□□□□ -1.41
PTPN13-209ENST00000511467 RTF1Q92541 710 aaKnown RBP6.22□□□□□ -1.41
PTPN13-209ENST00000511467 NSD2O96028 1365 aa6.22□□□□□ -1.41
PTPN13-209ENST00000511467 HNRNPUQ00839 825 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPN13-209ENST00000511467 CEP152O94986 1710 aa6.22□□□□□ -1.41
PTPN13-209ENST00000511467 BCL11BQ9C0K0 894 aaPredicted RBP6.22□□□□□ -1.41
PTPN13-209ENST00000511467 ATP6V1DQ9Y5K8 247 aa6.22□□□□□ -1.41
PTPN13-209ENST00000511467 KIF16BQ96L93 1317 aa6.22□□□□□ -1.41
PTPN13-209ENST00000511467 C14orf37Q86TY3 774 aa6.21□□□□□ -1.41
PTPN13-209ENST00000511467 SPHKAPQ2M3C7 1700 aa6.21□□□□□ -1.41
PTPN13-209ENST00000511467 CHGAP10645 457 aaKnown RBP6.21□□□□□ -1.41
PTPN13-209ENST00000511467 BCL11AQ9H165 835 aa6.21□□□□□ -1.42
PTPN13-209ENST00000511467 IGF1RP08069 1367 aa6.21□□□□□ -1.42
PTPN13-209ENST00000511467 PREX2Q70Z35 1606 aa6.21□□□□□ -1.42
PTPN13-209ENST00000511467 C9orf84Q5VXU9 1444 aa6.2□□□□□ -1.42
PTPN13-209ENST00000511467 RAB3GAP2Q9H2M9 1393 aa6.2□□□□□ -1.42
PTPN13-209ENST00000511467 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
PTPN13-209ENST00000511467 RPRD2Q5VT52 1461 aaKnown RBP6.2□□□□□ -1.42
PTPN13-209ENST00000511467 C11orf95C9JLR9 678 aaPredicted RBP6.19□□□□□ -1.42
PTPN13-209ENST00000511467 P3H3Q8IVL6 736 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 ZNF518AQ6AHZ1 1483 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 ANKRD50Q9ULJ7 1429 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 MAPKBP1O60336 1514 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 KIAA1107Q9UPP5 1409 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 NAP1L2Q9ULW6 460 aaPredicted RBP6.19□□□□□ -1.42
PTPN13-209ENST00000511467 FANCAO15360 1455 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 KAT6AQ92794 2004 aa6.19□□□□□ -1.42
PTPN13-209ENST00000511467 PLEKHG5O94827 1062 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 TPM4P67936 248 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 GOLGA2Q08379 1002 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 PUS7Q96PZ0 661 aaKnown RBP6.18□□□□□ -1.42
PTPN13-209ENST00000511467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPN13-209ENST00000511467 UHRF1BP1Q6BDS2 1440 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 TET3O43151 1660 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 KDM5DQ9BY66 1539 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 KIAA1211Q6ZU35 1233 aa6.18□□□□□ -1.42
PTPN13-209ENST00000511467 LRPPRCP42704 1394 aaKnown RBP6.17□□□□□ -1.42
PTPN13-209ENST00000511467 RWDD1Q9H446 243 aaPredicted RBP6.17□□□□□ -1.42
PTPN13-209ENST00000511467 HSP90AB4PQ58FF6 505 aa6.17□□□□□ -1.42
PTPN13-209ENST00000511467 BRD4O60885 1362 aaPredicted RBP6.17□□□□□ -1.42
PTPN13-209ENST00000511467 ABCC10Q5T3U5 1492 aa6.17□□□□□ -1.42
PTPN13-209ENST00000511467 MAGI2Q86UL8 1455 aa6.17□□□□□ -1.42
PTPN13-209ENST00000511467 TCERG1O14776 1098 aaKnown RBP6.17□□□□□ -1.42
PTPN13-209ENST00000511467 KIF7Q2M1P5 1343 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms