RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-208ENST00000511439 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
TOPBP1-208ENST00000511439 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-208ENST00000511439 SPDYE16A6NNV3 312 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-208ENST00000511439 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
TOPBP1-208ENST00000511439 RABGEF1Q9UJ41 708 aa9.08□□□□□ -0.96
TOPBP1-208ENST00000511439 PDIA6Q15084 440 aa9.07□□□□□ -0.96
TOPBP1-208ENST00000511439 E2F4Q16254 413 aa9.07□□□□□ -0.96
TOPBP1-208ENST00000511439 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-208ENST00000511439 WNT2BQ93097 391 aa9.05□□□□□ -0.96
TOPBP1-208ENST00000511439 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-208ENST00000511439 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
TOPBP1-208ENST00000511439 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
TOPBP1-208ENST00000511439 COL9A1P20849 921 aa9.03□□□□□ -0.96
TOPBP1-208ENST00000511439 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
TOPBP1-208ENST00000511439 DDX12PQ92771 950 aa9.03□□□□□ -0.96
TOPBP1-208ENST00000511439 PTPN5P54829 565 aa9.02□□□□□ -0.97
TOPBP1-208ENST00000511439 NBR1Q14596 966 aa9.01□□□□□ -0.97
TOPBP1-208ENST00000511439 PROX2Q3B8N5 592 aa9.01□□□□□ -0.97
TOPBP1-208ENST00000511439 EN1Q05925 392 aaPredicted RBP9□□□□□ -0.97
TOPBP1-208ENST00000511439 ANKK1Q8NFD2 765 aa9□□□□□ -0.97
TOPBP1-208ENST00000511439 RBM33Q96EV2 1170 aaKnown RBP9□□□□□ -0.97
TOPBP1-208ENST00000511439 MAP3K7O43318 606 aa8.99□□□□□ -0.97
TOPBP1-208ENST00000511439 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
TOPBP1-208ENST00000511439 KIAA1468Q9P260 1216 aa8.98□□□□□ -0.97
TOPBP1-208ENST00000511439 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
TOPBP1-208ENST00000511439 IFFO2Q5TF58 517 aa8.95□□□□□ -0.98
TOPBP1-208ENST00000511439 NYAP1Q6ZVC0 841 aa8.95□□□□□ -0.98
TOPBP1-208ENST00000511439 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
TOPBP1-208ENST00000511439 FAM98CQ17RN3 349 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-208ENST00000511439 ZFRQ96KR1 1074 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-208ENST00000511439 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
TOPBP1-208ENST00000511439 GRXCR2A6NFK2 248 aa8.93□□□□□ -0.98
TOPBP1-208ENST00000511439 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
TOPBP1-208ENST00000511439 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
TOPBP1-208ENST00000511439 TSR1Q2NL82 804 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-208ENST00000511439 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-208ENST00000511439 BCAMP50895 628 aa8.89□□□□□ -0.99
TOPBP1-208ENST00000511439 PRSS12P56730 875 aa8.89□□□□□ -0.99
TOPBP1-208ENST00000511439 ARHGEF1Q92888 912 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-208ENST00000511439 RGS20O76081 388 aa8.88□□□□□ -0.99
TOPBP1-208ENST00000511439 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
TOPBP1-208ENST00000511439 LRCH3Q96II8 777 aa8.88□□□□□ -0.99
TOPBP1-208ENST00000511439 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-208ENST00000511439 RBM27Q9P2N5 1060 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-208ENST00000511439 TSKSQ9UJT2 592 aa8.88□□□□□ -0.99
TOPBP1-208ENST00000511439 NBPF26B4DH59 902 aa8.87□□□□□ -0.99
TOPBP1-208ENST00000511439 OSBPP22059 807 aa8.87□□□□□ -0.99
TOPBP1-208ENST00000511439 TSHZ2Q9NRE2 1034 aa8.87□□□□□ -0.99
TOPBP1-208ENST00000511439 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-208ENST00000511439 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-208ENST00000511439 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
TOPBP1-208ENST00000511439 A0A0G2JS52 829 aa8.83□□□□□ -1
TOPBP1-208ENST00000511439 PRIM1P49642 420 aaKnown RBP8.83□□□□□ -1
TOPBP1-208ENST00000511439 WBP1LQ9NX94 342 aa8.83□□□□□ -1
TOPBP1-208ENST00000511439 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
TOPBP1-208ENST00000511439 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
TOPBP1-208ENST00000511439 TATDN2Q93075 761 aa8.82□□□□□ -1
TOPBP1-208ENST00000511439 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
TOPBP1-208ENST00000511439 CDHR5Q9HBB8 845 aa8.81□□□□□ -1
TOPBP1-208ENST00000511439 PNMA3Q9UL41 463 aa8.81□□□□□ -1
TOPBP1-208ENST00000511439 PPP4CP60510 307 aa8.8□□□□□ -1
TOPBP1-208ENST00000511439 NECTIN2Q92692 538 aa8.8□□□□□ -1
TOPBP1-208ENST00000511439 KCNC4Q03721 635 aa8.79□□□□□ -1
TOPBP1-208ENST00000511439 FAM198AQ9UFP1 575 aa8.79□□□□□ -1
TOPBP1-208ENST00000511439 SMAPO00193 183 aa8.78□□□□□ -1
TOPBP1-208ENST00000511439 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
TOPBP1-208ENST00000511439 NUDT18Q6ZVK8 323 aa8.77□□□□□ -1.01
TOPBP1-208ENST00000511439 SLC4A3P48751 1232 aa8.76□□□□□ -1.01
TOPBP1-208ENST00000511439 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-208ENST00000511439 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
TOPBP1-208ENST00000511439 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-208ENST00000511439 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
TOPBP1-208ENST00000511439 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-208ENST00000511439 SLF2Q8IX21 1173 aa8.72□□□□□ -1.01
TOPBP1-208ENST00000511439 C3orf80F5H4A9 247 aa8.71□□□□□ -1.02
TOPBP1-208ENST00000511439 RNF40O75150 1001 aa8.71□□□□□ -1.02
TOPBP1-208ENST00000511439 PTGDRQ13258 359 aa8.7□□□□□ -1.02
TOPBP1-208ENST00000511439 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
TOPBP1-208ENST00000511439 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-208ENST00000511439 EYA1Q99502 592 aa8.68□□□□□ -1.02
TOPBP1-208ENST00000511439 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
TOPBP1-208ENST00000511439 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-208ENST00000511439 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
TOPBP1-208ENST00000511439 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
TOPBP1-208ENST00000511439 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
TOPBP1-208ENST00000511439 VSIG10Q8N0Z9 540 aa8.67□□□□□ -1.02
TOPBP1-208ENST00000511439 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-208ENST00000511439 FCHSD2O94868 740 aa8.66□□□□□ -1.02
TOPBP1-208ENST00000511439 DNAJB2P25686 324 aa8.66□□□□□ -1.02
TOPBP1-208ENST00000511439 MTRQ99707 1265 aa8.66□□□□□ -1.02
TOPBP1-208ENST00000511439 SEMA3EO15041 775 aa8.65□□□□□ -1.02
TOPBP1-208ENST00000511439 APLP1P51693 650 aa8.63□□□□□ -1.03
TOPBP1-208ENST00000511439 KDM2AQ9Y2K7 1162 aa8.62□□□□□ -1.03
TOPBP1-208ENST00000511439 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
TOPBP1-208ENST00000511439 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
TOPBP1-208ENST00000511439 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-208ENST00000511439 OATP04181 439 aa8.6□□□□□ -1.03
TOPBP1-208ENST00000511439 HIC1Q14526 733 aa8.6□□□□□ -1.03
TOPBP1-208ENST00000511439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms