RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 FOSBP53539 338 aa7.7□□□□□ -1.18
TRAPPC11-207ENST00000511409 ARHGEF1Q92888 912 aaKnown RBP7.7□□□□□ -1.18
TRAPPC11-207ENST00000511409 JPH4Q96JJ6 628 aa7.7□□□□□ -1.18
TRAPPC11-207ENST00000511409 KCNK17Q96T54 332 aa7.7□□□□□ -1.18
TRAPPC11-207ENST00000511409 BCL2L12Q9HB09 334 aa7.7□□□□□ -1.18
TRAPPC11-207ENST00000511409 DPYSL4O14531 572 aa7.69□□□□□ -1.18
TRAPPC11-207ENST00000511409 PDIA6Q15084 440 aa7.69□□□□□ -1.18
TRAPPC11-207ENST00000511409 STAC3Q96MF2 364 aa7.68□□□□□ -1.18
TRAPPC11-207ENST00000511409 BHMG1C9JSJ3 638 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC11-207ENST00000511409 TULP1O00294 542 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC11-207ENST00000511409 PHF14O94880 888 aa7.65□□□□□ -1.18
TRAPPC11-207ENST00000511409 THSD4Q6ZMP0 1018 aa7.65□□□□□ -1.18
TRAPPC11-207ENST00000511409 A0A0G2JS52 829 aa7.64□□□□□ -1.19
TRAPPC11-207ENST00000511409 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
TRAPPC11-207ENST00000511409 EPAS1Q99814 870 aa7.64□□□□□ -1.19
TRAPPC11-207ENST00000511409 SEMA3EO15041 775 aa7.63□□□□□ -1.19
TRAPPC11-207ENST00000511409 FBXW7Q969H0 707 aa7.63□□□□□ -1.19
TRAPPC11-207ENST00000511409 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
TRAPPC11-207ENST00000511409 PCDHGA10Q9Y5H3 936 aa7.63□□□□□ -1.19
TRAPPC11-207ENST00000511409 PTPREP23469 700 aa7.62□□□□□ -1.19
TRAPPC11-207ENST00000511409 ZBED2Q9BTP6 218 aa7.62□□□□□ -1.19
TRAPPC11-207ENST00000511409 TYW1BQ6NUM6 668 aa7.61□□□□□ -1.19
TRAPPC11-207ENST00000511409 PTPN5P54829 565 aa7.6□□□□□ -1.19
TRAPPC11-207ENST00000511409 LMOD2Q6P5Q4 547 aa7.6□□□□□ -1.19
TRAPPC11-207ENST00000511409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRAPPC11-207ENST00000511409 ADAM33Q9BZ11 813 aa7.59□□□□□ -1.19
TRAPPC11-207ENST00000511409 TESPA1A2RU30 521 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC11-207ENST00000511409 SMYD5Q6GMV2 418 aa7.58□□□□□ -1.2
TRAPPC11-207ENST00000511409 WNT2BQ93097 391 aa7.58□□□□□ -1.2
TRAPPC11-207ENST00000511409 IRX2Q9BZI1 471 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC11-207ENST00000511409 NBPF3Q9H094 633 aa7.58□□□□□ -1.2
TRAPPC11-207ENST00000511409 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
TRAPPC11-207ENST00000511409 GOLGA8CPA6NN73 597 aa7.56□□□□□ -1.2
TRAPPC11-207ENST00000511409 DDX12PQ92771 950 aa7.56□□□□□ -1.2
TRAPPC11-207ENST00000511409 ITGBL1O95965 494 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-207ENST00000511409 EN1Q05925 392 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-207ENST00000511409 PPP1R3GB7ZBB8 358 aa7.54□□□□□ -1.2
TRAPPC11-207ENST00000511409 ONECUT3O60422 494 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC11-207ENST00000511409 OSBPP22059 807 aa7.53□□□□□ -1.2
TRAPPC11-207ENST00000511409 C6orf132Q5T0Z8 1188 aa7.53□□□□□ -1.2
TRAPPC11-207ENST00000511409 MLLT3P42568 568 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC11-207ENST00000511409 RABGEF1Q9UJ41 708 aa7.52□□□□□ -1.21
TRAPPC11-207ENST00000511409 NYAP1Q6ZVC0 841 aa7.5□□□□□ -1.21
TRAPPC11-207ENST00000511409 LAPTM4BQ86VI4 370 aa7.5□□□□□ -1.21
TRAPPC11-207ENST00000511409 CERKQ8TCT0 537 aa7.5□□□□□ -1.21
TRAPPC11-207ENST00000511409 GRXCR2A6NFK2 248 aa7.49□□□□□ -1.21
TRAPPC11-207ENST00000511409 COL9A1P20849 921 aa7.49□□□□□ -1.21
TRAPPC11-207ENST00000511409 PRIM1P49642 420 aaKnown RBP7.49□□□□□ -1.21
TRAPPC11-207ENST00000511409 ANKK1Q8NFD2 765 aa7.49□□□□□ -1.21
TRAPPC11-207ENST00000511409 MAP3K7O43318 606 aa7.48□□□□□ -1.21
TRAPPC11-207ENST00000511409 RBM26Q5T8P6 1007 aaKnown RBP7.48□□□□□ -1.21
TRAPPC11-207ENST00000511409 ZC3H15Q8WU90 426 aaKnown RBP7.48□□□□□ -1.21
TRAPPC11-207ENST00000511409 RBM33Q96EV2 1170 aaKnown RBP7.47□□□□□ -1.21
TRAPPC11-207ENST00000511409 RBM27Q9P2N5 1060 aaKnown RBP7.47□□□□□ -1.21
TRAPPC11-207ENST00000511409 SOWAHBA6NEL2 793 aa7.46□□□□□ -1.22
TRAPPC11-207ENST00000511409 TSR1Q2NL82 804 aaKnown RBP7.46□□□□□ -1.22
TRAPPC11-207ENST00000511409 GPIHBP1Q8IV16 184 aa7.45□□□□□ -1.22
TRAPPC11-207ENST00000511409 TRIM6-TRIM34B2RNG4 842 aa7.44□□□□□ -1.22
TRAPPC11-207ENST00000511409 PROX2Q3B8N5 592 aa7.44□□□□□ -1.22
TRAPPC11-207ENST00000511409 NPDC1Q9NQX5 325 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC11-207ENST00000511409 BCAMP50895 628 aa7.42□□□□□ -1.22
TRAPPC11-207ENST00000511409 PRSS12P56730 875 aa7.42□□□□□ -1.22
TRAPPC11-207ENST00000511409 TTC13Q8NBP0 860 aa7.42□□□□□ -1.22
TRAPPC11-207ENST00000511409 NUTM2FA1L443 756 aa7.41□□□□□ -1.22
TRAPPC11-207ENST00000511409 ZFRQ96KR1 1074 aaKnown RBP7.41□□□□□ -1.22
TRAPPC11-207ENST00000511409 CDHR5Q9HBB8 845 aa7.41□□□□□ -1.22
TRAPPC11-207ENST00000511409 LAPTM4AQ15012 233 aa7.4□□□□□ -1.22
TRAPPC11-207ENST00000511409 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
TRAPPC11-207ENST00000511409 CDCA7LQ96GN5 454 aa7.4□□□□□ -1.22
TRAPPC11-207ENST00000511409 SLC24A3Q9HC58 644 aa7.4□□□□□ -1.22
TRAPPC11-207ENST00000511409 KIAA1468Q9P260 1216 aa7.4□□□□□ -1.22
TRAPPC11-207ENST00000511409 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
TRAPPC11-207ENST00000511409 ZMYND10O75800 440 aa7.39□□□□□ -1.23
TRAPPC11-207ENST00000511409 KCNC4Q03721 635 aa7.39□□□□□ -1.23
TRAPPC11-207ENST00000511409 PTGDRQ13258 359 aa7.39□□□□□ -1.23
TRAPPC11-207ENST00000511409 PACS2Q86VP3 889 aa7.39□□□□□ -1.23
TRAPPC11-207ENST00000511409 FAM98CQ17RN3 349 aaKnown RBP7.37□□□□□ -1.23
TRAPPC11-207ENST00000511409 Q6ZNB5 142 aa7.37□□□□□ -1.23
TRAPPC11-207ENST00000511409 WBP1LQ9NX94 342 aa7.37□□□□□ -1.23
TRAPPC11-207ENST00000511409 FAM198AQ9UFP1 575 aa7.37□□□□□ -1.23
TRAPPC11-207ENST00000511409 FCHSD2O94868 740 aa7.36□□□□□ -1.23
TRAPPC11-207ENST00000511409 BARGINQ6ZT62 677 aa7.36□□□□□ -1.23
TRAPPC11-207ENST00000511409 TSR3Q9UJK0 312 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-207ENST00000511409 NBPF26B4DH59 902 aa7.35□□□□□ -1.23
TRAPPC11-207ENST00000511409 GPR37O15354 613 aa7.34□□□□□ -1.23
TRAPPC11-207ENST00000511409 HIC1Q14526 733 aa7.34□□□□□ -1.23
TRAPPC11-207ENST00000511409 TATDN2Q93075 761 aa7.34□□□□□ -1.23
TRAPPC11-207ENST00000511409 NEUROD2Q15784 382 aa7.33□□□□□ -1.24
TRAPPC11-207ENST00000511409 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
TRAPPC11-207ENST00000511409 LRCH3Q96II8 777 aa7.33□□□□□ -1.24
TRAPPC11-207ENST00000511409 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC11-207ENST00000511409 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC11-207ENST00000511409 AK7Q96M32 723 aa7.32□□□□□ -1.24
TRAPPC11-207ENST00000511409 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
TRAPPC11-207ENST00000511409 LCE2BO14633 110 aa7.31□□□□□ -1.24
TRAPPC11-207ENST00000511409 EYA1Q99502 592 aa7.31□□□□□ -1.24
TRAPPC11-207ENST00000511409 HPS5Q9UPZ3 1129 aa7.31□□□□□ -1.24
TRAPPC11-207ENST00000511409 GNPATO15228 680 aa7.3□□□□□ -1.24
TRAPPC11-207ENST00000511409 NUDT18Q6ZVK8 323 aa7.3□□□□□ -1.24
TRAPPC11-207ENST00000511409 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms