RNA–Protein interactions for RNA: ENST00000511391.1

ARRDC3-206, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-206ENST00000511391 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
ARRDC3-206ENST00000511391 KCNC4Q03721 635 aa12.54□□□□□ -0.4
ARRDC3-206ENST00000511391 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
ARRDC3-206ENST00000511391 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
ARRDC3-206ENST00000511391 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
ARRDC3-206ENST00000511391 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
ARRDC3-206ENST00000511391 RYDENQ9NUL5 291 aaKnown RBP12.51□□□□□ -0.41
ARRDC3-206ENST00000511391 MFSD10Q14728 455 aa12.5□□□□□ -0.41
ARRDC3-206ENST00000511391 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
ARRDC3-206ENST00000511391 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
ARRDC3-206ENST00000511391 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
ARRDC3-206ENST00000511391 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
ARRDC3-206ENST00000511391 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
ARRDC3-206ENST00000511391 PHF14O94880 888 aa12.47□□□□□ -0.41
ARRDC3-206ENST00000511391 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
ARRDC3-206ENST00000511391 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
ARRDC3-206ENST00000511391 GFRA3O60609 400 aa12.43□□□□□ -0.42
ARRDC3-206ENST00000511391 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
ARRDC3-206ENST00000511391 TSR3Q9UJK0 312 aaKnown RBP12.42□□□□□ -0.42
ARRDC3-206ENST00000511391 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
ARRDC3-206ENST00000511391 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
ARRDC3-206ENST00000511391 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
ARRDC3-206ENST00000511391 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
ARRDC3-206ENST00000511391 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
ARRDC3-206ENST00000511391 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
ARRDC3-206ENST00000511391 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
ARRDC3-206ENST00000511391 TJAP1Q5JTD0 557 aa12.34□□□□□ -0.43
ARRDC3-206ENST00000511391 EPAS1Q99814 870 aa12.34□□□□□ -0.43
ARRDC3-206ENST00000511391 PRKD2Q9BZL6 878 aa12.34□□□□□ -0.43
ARRDC3-206ENST00000511391 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
ARRDC3-206ENST00000511391 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
ARRDC3-206ENST00000511391 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
ARRDC3-206ENST00000511391 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
ARRDC3-206ENST00000511391 DPYSL4O14531 572 aa12.25□□□□□ -0.45
ARRDC3-206ENST00000511391 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
ARRDC3-206ENST00000511391 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
ARRDC3-206ENST00000511391 PPP4CP60510 307 aa12.24□□□□□ -0.45
ARRDC3-206ENST00000511391 MTRQ99707 1265 aa12.24□□□□□ -0.45
ARRDC3-206ENST00000511391 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
ARRDC3-206ENST00000511391 SAMD7Q7Z3H4 446 aa12.22□□□□□ -0.45
ARRDC3-206ENST00000511391 DDX12PQ92771 950 aa12.22□□□□□ -0.45
ARRDC3-206ENST00000511391 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
ARRDC3-206ENST00000511391 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
ARRDC3-206ENST00000511391 PACS2Q86VP3 889 aa12.2□□□□□ -0.46
ARRDC3-206ENST00000511391 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
ARRDC3-206ENST00000511391 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
ARRDC3-206ENST00000511391 SMAPO00193 183 aa12.19□□□□□ -0.46
ARRDC3-206ENST00000511391 ZNF516Q92618 1163 aa12.19□□□□□ -0.46
ARRDC3-206ENST00000511391 FAM198AQ9UFP1 575 aa12.19□□□□□ -0.46
ARRDC3-206ENST00000511391 ZNF775Q96BV0 537 aaPredicted RBP12.17□□□□□ -0.46
ARRDC3-206ENST00000511391 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
ARRDC3-206ENST00000511391 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
ARRDC3-206ENST00000511391 NBR1Q14596 966 aa12.15□□□□□ -0.46
ARRDC3-206ENST00000511391 MAP3K7O43318 606 aa12.14□□□□□ -0.47
ARRDC3-206ENST00000511391 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
ARRDC3-206ENST00000511391 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
ARRDC3-206ENST00000511391 APLP1P51693 650 aa12.11□□□□□ -0.47
ARRDC3-206ENST00000511391 PRSS12P56730 875 aa12.1□□□□□ -0.47
ARRDC3-206ENST00000511391 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
ARRDC3-206ENST00000511391 PDIA6Q15084 440 aa12.07□□□□□ -0.48
ARRDC3-206ENST00000511391 TATDN2Q93075 761 aa12.07□□□□□ -0.48
ARRDC3-206ENST00000511391 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
ARRDC3-206ENST00000511391 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
ARRDC3-206ENST00000511391 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
ARRDC3-206ENST00000511391 RNF40O75150 1001 aa12.01□□□□□ -0.49
ARRDC3-206ENST00000511391 EMID1Q96A84 441 aaPredicted RBP12.01□□□□□ -0.49
ARRDC3-206ENST00000511391 COPS2P61201 443 aa11.99□□□□□ -0.49
ARRDC3-206ENST00000511391 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
ARRDC3-206ENST00000511391 CERKQ8TCT0 537 aa11.99□□□□□ -0.49
ARRDC3-206ENST00000511391 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
ARRDC3-206ENST00000511391 POTECB2RU33 542 aa11.97□□□□□ -0.49
ARRDC3-206ENST00000511391 GGCXP38435 758 aa11.97□□□□□ -0.49
ARRDC3-206ENST00000511391 MYT1Q01538 1121 aa11.97□□□□□ -0.49
ARRDC3-206ENST00000511391 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
ARRDC3-206ENST00000511391 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
ARRDC3-206ENST00000511391 RBM27Q9P2N5 1060 aaKnown RBP11.94□□□□□ -0.5
ARRDC3-206ENST00000511391 ZPR1O75312 459 aa11.93□□□□□ -0.5
ARRDC3-206ENST00000511391 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
ARRDC3-206ENST00000511391 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
ARRDC3-206ENST00000511391 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
ARRDC3-206ENST00000511391 SLC19A1P41440 591 aa11.9□□□□□ -0.5
ARRDC3-206ENST00000511391 PKDCCQ504Y2 493 aa11.9□□□□□ -0.5
ARRDC3-206ENST00000511391 LCE2AQ5TA79 106 aaPredicted RBP11.9□□□□□ -0.5
ARRDC3-206ENST00000511391 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
ARRDC3-206ENST00000511391 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 DGAT1O75907 488 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 PRR20EP86478 221 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 PRR20CP86479 221 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 PRR20DP86480 221 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 PRR20BP86481 221 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 PRR20AP86496 221 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
ARRDC3-206ENST00000511391 OSBPP22059 807 aa11.87□□□□□ -0.51
ARRDC3-206ENST00000511391 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
ARRDC3-206ENST00000511391 TLL1O43897 1013 aa11.84□□□□□ -0.51
ARRDC3-206ENST00000511391 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
ARRDC3-206ENST00000511391 ZNF598Q86UK7 904 aaKnown RBP11.84□□□□□ -0.51
ARRDC3-206ENST00000511391 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
ARRDC3-206ENST00000511391 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms