RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 ABCC5O15440 1437 aa15.92■□□□□ 0.14
SH3TC2-208ENST00000510779 BCORL1Q5H9F3 1711 aa15.91■□□□□ 0.14
SH3TC2-208ENST00000510779 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
SH3TC2-208ENST00000510779 POGKQ9P215 609 aa15.91■□□□□ 0.14
SH3TC2-208ENST00000510779 CTTNBP2Q8WZ74 1663 aa15.9■□□□□ 0.14
SH3TC2-208ENST00000510779 WDR43Q15061 677 aaKnown RBP eCLIP15.9■□□□□ 0.14
SH3TC2-208ENST00000510779 NUP155O75694 1391 aa15.9■□□□□ 0.14
SH3TC2-208ENST00000510779 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
SH3TC2-208ENST00000510779 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
SH3TC2-208ENST00000510779 LRRIQ1Q96JM4 1722 aa15.89■□□□□ 0.13
SH3TC2-208ENST00000510779 FAM43AQ8N2R8 423 aa15.89■□□□□ 0.13
SH3TC2-208ENST00000510779 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
SH3TC2-208ENST00000510779 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
SH3TC2-208ENST00000510779 PANK3Q9H999 370 aa15.88■□□□□ 0.13
SH3TC2-208ENST00000510779 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
SH3TC2-208ENST00000510779 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
SH3TC2-208ENST00000510779 NAP1L5Q96NT1 182 aaPredicted RBP15.87■□□□□ 0.13
SH3TC2-208ENST00000510779 ROCK1Q13464 1354 aa15.87■□□□□ 0.13
SH3TC2-208ENST00000510779 GZF1Q9H116 711 aaPredicted RBP15.86■□□□□ 0.13
SH3TC2-208ENST00000510779 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
SH3TC2-208ENST00000510779 NBPF1Q3BBV0 1214 aa15.85■□□□□ 0.13
SH3TC2-208ENST00000510779 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
SH3TC2-208ENST00000510779 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.13
SH3TC2-208ENST00000510779 PZPP20742 1482 aa15.83■□□□□ 0.12
SH3TC2-208ENST00000510779 BECN1Q14457 450 aa15.83■□□□□ 0.12
SH3TC2-208ENST00000510779 KDM2BQ8NHM5 1336 aa15.82■□□□□ 0.12
SH3TC2-208ENST00000510779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
SH3TC2-208ENST00000510779 GOLGA2Q08379 1002 aa15.81■□□□□ 0.12
SH3TC2-208ENST00000510779 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
SH3TC2-208ENST00000510779 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
SH3TC2-208ENST00000510779 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
SH3TC2-208ENST00000510779 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 GRIN2AQ12879 1464 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 PARD3Q8TEW0 1356 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 ANKRD30AQ9BXX3 1397 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 BCAR3O75815 825 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 GLIPR1L2Q4G1C9 344 aa15.79■□□□□ 0.12
SH3TC2-208ENST00000510779 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
SH3TC2-208ENST00000510779 KDM5CP41229 1560 aa15.78■□□□□ 0.12
SH3TC2-208ENST00000510779 KNSTRNQ9Y448 316 aa15.78■□□□□ 0.12
SH3TC2-208ENST00000510779 SEC24BO95487 1268 aa15.77■□□□□ 0.12
SH3TC2-208ENST00000510779 L1TD1Q5T7N2 865 aaKnown RBP15.77■□□□□ 0.12
SH3TC2-208ENST00000510779 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.12
SH3TC2-208ENST00000510779 SYNJ2O15056 1496 aa15.77■□□□□ 0.12
SH3TC2-208ENST00000510779 VSIG10Q8N0Z9 540 aa15.77■□□□□ 0.11
SH3TC2-208ENST00000510779 UPF2Q9HAU5 1272 aaKnown RBP15.77■□□□□ 0.11
SH3TC2-208ENST00000510779 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
SH3TC2-208ENST00000510779 ANKRD50Q9ULJ7 1429 aa15.76■□□□□ 0.11
SH3TC2-208ENST00000510779 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
SH3TC2-208ENST00000510779 PNNQ9H307 717 aaKnown RBP15.76■□□□□ 0.11
SH3TC2-208ENST00000510779 RALGAPBQ86X10 1494 aa15.75■□□□□ 0.11
SH3TC2-208ENST00000510779 MBD5Q9P267 1494 aa15.75■□□□□ 0.11
SH3TC2-208ENST00000510779 TMF1P82094 1093 aa15.74■□□□□ 0.11
SH3TC2-208ENST00000510779 IGHDP01880 384 aa15.74■□□□□ 0.11
SH3TC2-208ENST00000510779 FBLN2P98095 1184 aa15.74■□□□□ 0.11
SH3TC2-208ENST00000510779 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
SH3TC2-208ENST00000510779 PKNOX2Q96KN3 472 aa15.74■□□□□ 0.11
SH3TC2-208ENST00000510779 COG6Q9Y2V7 657 aa15.74■□□□□ 0.11
SH3TC2-208ENST00000510779 PLEKHH1Q9ULM0 1364 aa15.73■□□□□ 0.11
SH3TC2-208ENST00000510779 GOLGA6L3A6NEY3 463 aa15.73■□□□□ 0.11
SH3TC2-208ENST00000510779 APAF1O14727 1248 aa15.73■□□□□ 0.11
SH3TC2-208ENST00000510779 NEUROD2Q15784 382 aa15.73■□□□□ 0.11
SH3TC2-208ENST00000510779 KIF14Q15058 1648 aa15.73■□□□□ 0.11
SH3TC2-208ENST00000510779 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
SH3TC2-208ENST00000510779 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
SH3TC2-208ENST00000510779 CHD1O14646 1710 aa15.71■□□□□ 0.11
SH3TC2-208ENST00000510779 HNRNPMP52272 730 aaKnown RBP eCLIP15.71■□□□□ 0.11
SH3TC2-208ENST00000510779 PANK2Q9BZ23 570 aa15.71■□□□□ 0.1
SH3TC2-208ENST00000510779 DISP3Q9P2K9 1392 aa15.71■□□□□ 0.1
SH3TC2-208ENST00000510779 PPP2R1AP30153 589 aa15.69■□□□□ 0.1
SH3TC2-208ENST00000510779 DNMT1P26358 1616 aaKnown RBP15.69■□□□□ 0.1
SH3TC2-208ENST00000510779 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
SH3TC2-208ENST00000510779 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
SH3TC2-208ENST00000510779 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
SH3TC2-208ENST00000510779 IQGAP2Q13576 1575 aa15.69■□□□□ 0.1
SH3TC2-208ENST00000510779 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
SH3TC2-208ENST00000510779 NUP160Q12769 1436 aa15.68■□□□□ 0.1
SH3TC2-208ENST00000510779 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
SH3TC2-208ENST00000510779 XRCC6P12956 609 aaKnown RBP eCLIP15.67■□□□□ 0.1
SH3TC2-208ENST00000510779 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
SH3TC2-208ENST00000510779 KIAA0586Q9BVV6 1533 aa15.67■□□□□ 0.1
SH3TC2-208ENST00000510779 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
SH3TC2-208ENST00000510779 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
SH3TC2-208ENST00000510779 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
SH3TC2-208ENST00000510779 USP19O94966 1318 aa15.64■□□□□ 0.09
SH3TC2-208ENST00000510779 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
SH3TC2-208ENST00000510779 PLEKHD1A6NEE1 506 aa15.64■□□□□ 0.09
SH3TC2-208ENST00000510779 TESK2Q96S53 571 aa15.64■□□□□ 0.09
SH3TC2-208ENST00000510779 MAPK8IP3Q9UPT6 1336 aa15.63■□□□□ 0.09
SH3TC2-208ENST00000510779 TBC1D2Q9BYX2 928 aa15.63■□□□□ 0.09
SH3TC2-208ENST00000510779 DISP1Q96F81 1524 aa15.62■□□□□ 0.09
SH3TC2-208ENST00000510779 CENPJQ9HC77 1338 aaPredicted RBP15.62■□□□□ 0.09
SH3TC2-208ENST00000510779 MFAP1P55081 439 aaKnown RBP15.62■□□□□ 0.09
SH3TC2-208ENST00000510779 ZMYND15Q9H091 742 aa15.62■□□□□ 0.09
SH3TC2-208ENST00000510779 ZMYM4Q5VZL5 1548 aa15.62■□□□□ 0.09
SH3TC2-208ENST00000510779 TNNT2P45379 298 aaPredicted RBP15.62■□□□□ 0.09
SH3TC2-208ENST00000510779 RRP7AQ9Y3A4 280 aaKnown RBP15.61■□□□□ 0.09
SH3TC2-208ENST00000510779 TRIM44Q96DX7 344 aaPredicted RBP15.61■□□□□ 0.09
SH3TC2-208ENST00000510779 CGNL1Q0VF96 1302 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms