RNA–Protein interactions for RNA: ENST00000510774.1

ATP2C1-219, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-219ENST00000510774 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
ATP2C1-219ENST00000510774 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
ATP2C1-219ENST00000510774 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-219ENST00000510774 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
ATP2C1-219ENST00000510774 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
ATP2C1-219ENST00000510774 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
ATP2C1-219ENST00000510774 NUDT7P0C024 238 aa13.15□□□□□ -0.3
ATP2C1-219ENST00000510774 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
ATP2C1-219ENST00000510774 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
ATP2C1-219ENST00000510774 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
ATP2C1-219ENST00000510774 GPR153Q6NV75 609 aa13.14□□□□□ -0.31
ATP2C1-219ENST00000510774 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
ATP2C1-219ENST00000510774 ZNF454Q8N9F8 522 aa13.13□□□□□ -0.31
ATP2C1-219ENST00000510774 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
ATP2C1-219ENST00000510774 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATP2C1-219ENST00000510774 FAM117AQ9C073 453 aa13.12□□□□□ -0.31
ATP2C1-219ENST00000510774 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-219ENST00000510774 C6orf132Q5T0Z8 1188 aa13.11□□□□□ -0.31
ATP2C1-219ENST00000510774 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-219ENST00000510774 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
ATP2C1-219ENST00000510774 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
ATP2C1-219ENST00000510774 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
ATP2C1-219ENST00000510774 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
ATP2C1-219ENST00000510774 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
ATP2C1-219ENST00000510774 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
ATP2C1-219ENST00000510774 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
ATP2C1-219ENST00000510774 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
ATP2C1-219ENST00000510774 CLCN1P35523 988 aa13.05□□□□□ -0.32
ATP2C1-219ENST00000510774 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
ATP2C1-219ENST00000510774 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-219ENST00000510774 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
ATP2C1-219ENST00000510774 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
ATP2C1-219ENST00000510774 SNPHO15079 494 aa13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 OATP04181 439 aa13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 MS4A1P11836 297 aa13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 METTL3Q86U44 580 aaKnown RBP13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 PHOX2BQ99453 314 aa13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
ATP2C1-219ENST00000510774 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
ATP2C1-219ENST00000510774 PXYLP1Q8TE99 480 aa13□□□□□ -0.33
ATP2C1-219ENST00000510774 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
ATP2C1-219ENST00000510774 PRSS12P56730 875 aa12.99□□□□□ -0.33
ATP2C1-219ENST00000510774 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
ATP2C1-219ENST00000510774 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
ATP2C1-219ENST00000510774 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
ATP2C1-219ENST00000510774 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
ATP2C1-219ENST00000510774 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
ATP2C1-219ENST00000510774 COL9A1P20849 921 aa12.93□□□□□ -0.34
ATP2C1-219ENST00000510774 FAM217BQ9NTX9 383 aaPredicted RBP12.93□□□□□ -0.34
ATP2C1-219ENST00000510774 PTPREP23469 700 aa12.92□□□□□ -0.34
ATP2C1-219ENST00000510774 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
ATP2C1-219ENST00000510774 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
ATP2C1-219ENST00000510774 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
ATP2C1-219ENST00000510774 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
ATP2C1-219ENST00000510774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-219ENST00000510774 NLRP7Q8WX94 980 aa12.89□□□□□ -0.35
ATP2C1-219ENST00000510774 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
ATP2C1-219ENST00000510774 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
ATP2C1-219ENST00000510774 EYA1Q99502 592 aa12.86□□□□□ -0.35
ATP2C1-219ENST00000510774 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
ATP2C1-219ENST00000510774 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
ATP2C1-219ENST00000510774 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
ATP2C1-219ENST00000510774 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
ATP2C1-219ENST00000510774 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
ATP2C1-219ENST00000510774 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
ATP2C1-219ENST00000510774 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
ATP2C1-219ENST00000510774 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
ATP2C1-219ENST00000510774 DNAJB2P25686 324 aa12.8□□□□□ -0.36
ATP2C1-219ENST00000510774 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
ATP2C1-219ENST00000510774 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
ATP2C1-219ENST00000510774 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
ATP2C1-219ENST00000510774 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
ATP2C1-219ENST00000510774 TATDN2Q93075 761 aa12.78□□□□□ -0.36
ATP2C1-219ENST00000510774 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
ATP2C1-219ENST00000510774 FLIIQ13045 1269 aa12.77□□□□□ -0.37
ATP2C1-219ENST00000510774 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
ATP2C1-219ENST00000510774 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
ATP2C1-219ENST00000510774 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
ATP2C1-219ENST00000510774 TMEM134Q9H6X4 195 aa12.76□□□□□ -0.37
ATP2C1-219ENST00000510774 CD46P15529 392 aa12.75□□□□□ -0.37
ATP2C1-219ENST00000510774 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
ATP2C1-219ENST00000510774 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
ATP2C1-219ENST00000510774 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
ATP2C1-219ENST00000510774 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
ATP2C1-219ENST00000510774 LHX8Q68G74 356 aa12.73□□□□□ -0.37
ATP2C1-219ENST00000510774 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
ATP2C1-219ENST00000510774 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
ATP2C1-219ENST00000510774 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
ATP2C1-219ENST00000510774 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATP2C1-219ENST00000510774 ERBB3P21860 1342 aa12.69□□□□□ -0.38
ATP2C1-219ENST00000510774 ARHGAP33O14559 1287 aa12.69□□□□□ -0.38
ATP2C1-219ENST00000510774 PSEN2P49810 448 aa12.69□□□□□ -0.38
ATP2C1-219ENST00000510774 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
ATP2C1-219ENST00000510774 SMAPO00193 183 aa12.68□□□□□ -0.38
ATP2C1-219ENST00000510774 PBX2P40425 430 aa12.68□□□□□ -0.38
ATP2C1-219ENST00000510774 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-219ENST00000510774 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
ATP2C1-219ENST00000510774 KIAA1468Q9P260 1216 aa12.68□□□□□ -0.38
ATP2C1-219ENST00000510774 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms