RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
USP53-206ENST00000510737 PDIA6Q15084 440 aa18.84■□□□□ 0.61
USP53-206ENST00000510737 E2F4Q16254 413 aa18.84■□□□□ 0.61
USP53-206ENST00000510737 EPAS1Q99814 870 aa18.81■□□□□ 0.6
USP53-206ENST00000510737 C6orf132Q5T0Z8 1188 aa18.79■□□□□ 0.6
USP53-206ENST00000510737 RBM33Q96EV2 1170 aaKnown RBP18.78■□□□□ 0.6
USP53-206ENST00000510737 ARIH1Q9Y4X5 557 aaPredicted RBP18.76■□□□□ 0.59
USP53-206ENST00000510737 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
USP53-206ENST00000510737 TSHZ2Q9NRE2 1034 aa18.75■□□□□ 0.59
USP53-206ENST00000510737 WDR70Q9NW82 654 aa18.74■□□□□ 0.59
USP53-206ENST00000510737 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
USP53-206ENST00000510737 SPDYE16A6NNV3 312 aaPredicted RBP18.72■□□□□ 0.59
USP53-206ENST00000510737 NBR1Q14596 966 aa18.72■□□□□ 0.59
USP53-206ENST00000510737 PLA2G2EQ9NZK7 142 aa18.72■□□□□ 0.59
USP53-206ENST00000510737 RABGEF1Q9UJ41 708 aa18.72■□□□□ 0.59
USP53-206ENST00000510737 PTPN5P54829 565 aa18.71■□□□□ 0.59
USP53-206ENST00000510737 THSD4Q6ZMP0 1018 aa18.71■□□□□ 0.59
USP53-206ENST00000510737 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
USP53-206ENST00000510737 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
USP53-206ENST00000510737 WNT2BQ93097 391 aa18.69■□□□□ 0.58
USP53-206ENST00000510737 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
USP53-206ENST00000510737 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
USP53-206ENST00000510737 GOLGA8CPA6NN73 597 aa18.65■□□□□ 0.58
USP53-206ENST00000510737 MAP3K7O43318 606 aa18.62■□□□□ 0.57
USP53-206ENST00000510737 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
USP53-206ENST00000510737 GRXCR2A6NFK2 248 aa18.6■□□□□ 0.57
USP53-206ENST00000510737 ONECUT3O60422 494 aaPredicted RBP18.59■□□□□ 0.57
USP53-206ENST00000510737 SEPT9Q9UHD8 586 aaPredicted RBP18.59■□□□□ 0.57
USP53-206ENST00000510737 OSBPP22059 807 aa18.56■□□□□ 0.56
USP53-206ENST00000510737 TSKSQ9UJT2 592 aa18.56■□□□□ 0.56
USP53-206ENST00000510737 LAPTM4BQ86VI4 370 aa18.54■□□□□ 0.56
USP53-206ENST00000510737 BCAMP50895 628 aa18.53■□□□□ 0.56
USP53-206ENST00000510737 ZFRQ96KR1 1074 aaKnown RBP18.52■□□□□ 0.56
USP53-206ENST00000510737 FAM198AQ9UFP1 575 aa18.52■□□□□ 0.56
USP53-206ENST00000510737 CDHR5Q9HBB8 845 aa18.51■□□□□ 0.55
USP53-206ENST00000510737 ANKK1Q8NFD2 765 aa18.5■□□□□ 0.55
USP53-206ENST00000510737 KCNV2Q8TDN2 545 aa18.49■□□□□ 0.55
USP53-206ENST00000510737 C3orf80F5H4A9 247 aa18.48■□□□□ 0.55
USP53-206ENST00000510737 SOWAHBA6NEL2 793 aa18.46■□□□□ 0.55
USP53-206ENST00000510737 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
USP53-206ENST00000510737 PRSS12P56730 875 aa18.44■□□□□ 0.54
USP53-206ENST00000510737 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
USP53-206ENST00000510737 SMAPO00193 183 aa18.41■□□□□ 0.54
USP53-206ENST00000510737 MLLT3P42568 568 aaPredicted RBP18.4■□□□□ 0.54
USP53-206ENST00000510737 ARHGEF1Q92888 912 aaKnown RBP18.4■□□□□ 0.54
USP53-206ENST00000510737 PACS2Q86VP3 889 aa18.39■□□□□ 0.53
USP53-206ENST00000510737 WBP1LQ9NX94 342 aa18.38■□□□□ 0.53
USP53-206ENST00000510737 NPDC1Q9NQX5 325 aaPredicted RBP18.37■□□□□ 0.53
USP53-206ENST00000510737 CERKQ8TCT0 537 aa18.36■□□□□ 0.53
USP53-206ENST00000510737 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
USP53-206ENST00000510737 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
USP53-206ENST00000510737 PLCB2Q00722 1185 aa18.3■□□□□ 0.52
USP53-206ENST00000510737 TATDN2Q93075 761 aa18.3■□□□□ 0.52
USP53-206ENST00000510737 LRCH3Q96II8 777 aa18.29■□□□□ 0.52
USP53-206ENST00000510737 TTC13Q8NBP0 860 aa18.28■□□□□ 0.52
USP53-206ENST00000510737 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
USP53-206ENST00000510737 HPS5Q9UPZ3 1129 aa18.28■□□□□ 0.52
USP53-206ENST00000510737 ITGBL1O95965 494 aaPredicted RBP18.26■□□□□ 0.51
USP53-206ENST00000510737 SAMD7Q7Z3H4 446 aa18.26■□□□□ 0.51
USP53-206ENST00000510737 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
USP53-206ENST00000510737 TSR3Q9UJK0 312 aaKnown RBP18.26■□□□□ 0.51
USP53-206ENST00000510737 PADI6Q6TGC4 694 aa18.25■□□□□ 0.51
USP53-206ENST00000510737 NUDT18Q6ZVK8 323 aa18.25■□□□□ 0.51
USP53-206ENST00000510737 A0A0G2JS52 829 aa18.23■□□□□ 0.51
USP53-206ENST00000510737 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
USP53-206ENST00000510737 NYAP1Q6ZVC0 841 aa18.21■□□□□ 0.51
USP53-206ENST00000510737 SEMA3EO15041 775 aa18.17■□□□□ 0.5
USP53-206ENST00000510737 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
USP53-206ENST00000510737 PPP4CP60510 307 aa18.13■□□□□ 0.49
USP53-206ENST00000510737 PTGDRQ13258 359 aa18.13■□□□□ 0.49
USP53-206ENST00000510737 EYA1Q99502 592 aa18.1■□□□□ 0.49
USP53-206ENST00000510737 KCNC4Q03721 635 aa18.07■□□□□ 0.48
USP53-206ENST00000510737 SWT1Q5T5J6 900 aaKnown RBP18.06■□□□□ 0.48
USP53-206ENST00000510737 NUTM2FA1L443 756 aa18.03■□□□□ 0.48
USP53-206ENST00000510737 RGS20O76081 388 aa18.03■□□□□ 0.48
USP53-206ENST00000510737 TJAP1Q5JTD0 557 aa18.03■□□□□ 0.48
USP53-206ENST00000510737 RNF40O75150 1001 aa18.02■□□□□ 0.48
USP53-206ENST00000510737 APLP1P51693 650 aa18.01■□□□□ 0.47
USP53-206ENST00000510737 FAM161AQ3B820 660 aa18■□□□□ 0.47
USP53-206ENST00000510737 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
USP53-206ENST00000510737 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
USP53-206ENST00000510737 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
USP53-206ENST00000510737 ADGRG1Q9Y653 693 aa17.98■□□□□ 0.47
USP53-206ENST00000510737 MTRQ99707 1265 aa17.97■□□□□ 0.47
USP53-206ENST00000510737 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
USP53-206ENST00000510737 RBM26Q5T8P6 1007 aaKnown RBP17.94■□□□□ 0.46
USP53-206ENST00000510737 ZNF516Q92618 1163 aa17.92■□□□□ 0.46
USP53-206ENST00000510737 FCHSD2O94868 740 aa17.91■□□□□ 0.46
USP53-206ENST00000510737 SLF2Q8IX21 1173 aa17.91■□□□□ 0.46
USP53-206ENST00000510737 IL21Q9HBE4 155 aa17.88■□□□□ 0.45
USP53-206ENST00000510737 DNAJB2P25686 324 aa17.87■□□□□ 0.45
USP53-206ENST00000510737 RBM46Q8TBY0 533 aaKnown RBP17.86■□□□□ 0.45
USP53-206ENST00000510737 TMEM134Q9H6X4 195 aa17.86■□□□□ 0.45
USP53-206ENST00000510737 RCCD1A6NED2 376 aa17.85■□□□□ 0.45
USP53-206ENST00000510737 GPR37O15354 613 aa17.84■□□□□ 0.45
USP53-206ENST00000510737 FECHP22830 423 aa17.83■□□□□ 0.44
USP53-206ENST00000510737 NKX2-3Q8TAU0 364 aa17.82■□□□□ 0.44
USP53-206ENST00000510737 COPS2P61201 443 aa17.8■□□□□ 0.44
USP53-206ENST00000510737 IRX2Q9BZI1 471 aaPredicted RBP17.79■□□□□ 0.44
USP53-206ENST00000510737 HIC1Q14526 733 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms