RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
NFKB1-209ENST00000510638 C3P01024 1663 aa12.93□□□□□ -0.34
NFKB1-209ENST00000510638 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
NFKB1-209ENST00000510638 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
NFKB1-209ENST00000510638 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
NFKB1-209ENST00000510638 KDM5CP41229 1560 aa12.91□□□□□ -0.34
NFKB1-209ENST00000510638 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
NFKB1-209ENST00000510638 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
NFKB1-209ENST00000510638 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
NFKB1-209ENST00000510638 ATP7AQ04656 1500 aa12.9□□□□□ -0.34
NFKB1-209ENST00000510638 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
NFKB1-209ENST00000510638 UBAP1LF5GYI3 381 aa12.88□□□□□ -0.35
NFKB1-209ENST00000510638 CROCC2H7BZ55 1655 aa12.88□□□□□ -0.35
NFKB1-209ENST00000510638 NAIPQ13075 1403 aa12.88□□□□□ -0.35
NFKB1-209ENST00000510638 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-209ENST00000510638 ANKRD50Q9ULJ7 1429 aa12.87□□□□□ -0.35
NFKB1-209ENST00000510638 INO80Q9ULG1 1556 aaPredicted RBP12.86□□□□□ -0.35
NFKB1-209ENST00000510638 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
NFKB1-209ENST00000510638 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
NFKB1-209ENST00000510638 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
NFKB1-209ENST00000510638 HRCP23327 699 aa12.85□□□□□ -0.35
NFKB1-209ENST00000510638 ERBINQ96RT1 1412 aa12.85□□□□□ -0.35
NFKB1-209ENST00000510638 ATP10AO60312 1499 aa12.85□□□□□ -0.35
NFKB1-209ENST00000510638 A2MP01023 1474 aa12.85□□□□□ -0.35
NFKB1-209ENST00000510638 RAB3GAP2Q9H2M9 1393 aa12.84□□□□□ -0.35
NFKB1-209ENST00000510638 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
NFKB1-209ENST00000510638 MLECQ14165 292 aa12.82□□□□□ -0.36
NFKB1-209ENST00000510638 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
NFKB1-209ENST00000510638 ZNF142P52746 1687 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-209ENST00000510638 KIF3BO15066 747 aa12.81□□□□□ -0.36
NFKB1-209ENST00000510638 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
NFKB1-209ENST00000510638 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
NFKB1-209ENST00000510638 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
NFKB1-209ENST00000510638 DIP2CQ9Y2E4 1556 aa12.8□□□□□ -0.36
NFKB1-209ENST00000510638 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
NFKB1-209ENST00000510638 ABCA6Q8N139 1617 aa12.79□□□□□ -0.36
NFKB1-209ENST00000510638 KANK1Q14678 1352 aa12.79□□□□□ -0.36
NFKB1-209ENST00000510638 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
NFKB1-209ENST00000510638 CEBPAP49715 358 aaPredicted RBP12.78□□□□□ -0.36
NFKB1-209ENST00000510638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
NFKB1-209ENST00000510638 HSPA1LP34931 641 aa12.77□□□□□ -0.37
NFKB1-209ENST00000510638 NUP155O75694 1391 aa12.77□□□□□ -0.37
NFKB1-209ENST00000510638 GGT6Q6P531 493 aa12.76□□□□□ -0.37
NFKB1-209ENST00000510638 AGLP35573 1532 aa12.75□□□□□ -0.37
NFKB1-209ENST00000510638 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
NFKB1-209ENST00000510638 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
NFKB1-209ENST00000510638 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
NFKB1-209ENST00000510638 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-209ENST00000510638 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
NFKB1-209ENST00000510638 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-209ENST00000510638 CPS1P31327 1500 aa12.73□□□□□ -0.37
NFKB1-209ENST00000510638 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
NFKB1-209ENST00000510638 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
NFKB1-209ENST00000510638 TOM1O60784 492 aa12.72□□□□□ -0.37
NFKB1-209ENST00000510638 NPATQ14207 1427 aa12.71□□□□□ -0.37
NFKB1-209ENST00000510638 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.37
NFKB1-209ENST00000510638 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
NFKB1-209ENST00000510638 CCER1Q8TC90 406 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-209ENST00000510638 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
NFKB1-209ENST00000510638 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
NFKB1-209ENST00000510638 PKD2Q13563 968 aa12.69□□□□□ -0.38
NFKB1-209ENST00000510638 UNC13BO14795 1591 aa12.69□□□□□ -0.38
NFKB1-209ENST00000510638 PRDM15P57071 1507 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-209ENST00000510638 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
NFKB1-209ENST00000510638 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
NFKB1-209ENST00000510638 RNF17Q9BXT8 1623 aaKnown RBP12.67□□□□□ -0.38
NFKB1-209ENST00000510638 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
NFKB1-209ENST00000510638 CEP170BQ9Y4F5 1589 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-209ENST00000510638 ADRA2BP18089 450 aa12.66□□□□□ -0.38
NFKB1-209ENST00000510638 PIP4K2BP78356 416 aa12.66□□□□□ -0.38
NFKB1-209ENST00000510638 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
NFKB1-209ENST00000510638 PZPP20742 1482 aa12.65□□□□□ -0.38
NFKB1-209ENST00000510638 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
NFKB1-209ENST00000510638 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
NFKB1-209ENST00000510638 SETD1AO15047 1707 aaKnown RBP12.64□□□□□ -0.39
NFKB1-209ENST00000510638 ABCC3O15438 1527 aa12.63□□□□□ -0.39
NFKB1-209ENST00000510638 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
NFKB1-209ENST00000510638 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
NFKB1-209ENST00000510638 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NFKB1-209ENST00000510638 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
NFKB1-209ENST00000510638 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
NFKB1-209ENST00000510638 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
NFKB1-209ENST00000510638 RPRD2Q5VT52 1461 aaKnown RBP12.6□□□□□ -0.39
NFKB1-209ENST00000510638 ZMYM3Q14202 1370 aa12.59□□□□□ -0.39
NFKB1-209ENST00000510638 EFCAB6Q5THR3 1501 aa12.59□□□□□ -0.39
NFKB1-209ENST00000510638 CLTCQ00610 1675 aaKnown RBP12.59□□□□□ -0.39
NFKB1-209ENST00000510638 ZC3H13Q5T200 1668 aaKnown RBP12.59□□□□□ -0.39
NFKB1-209ENST00000510638 TET3O43151 1660 aa12.58□□□□□ -0.4
NFKB1-209ENST00000510638 SYNMO15061 1565 aa12.58□□□□□ -0.4
NFKB1-209ENST00000510638 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
NFKB1-209ENST00000510638 ANKRD30BQ9BXX2 1392 aa12.56□□□□□ -0.4
NFKB1-209ENST00000510638 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
NFKB1-209ENST00000510638 CCDC144AA2RUR9 1427 aa12.55□□□□□ -0.4
NFKB1-209ENST00000510638 SLC52A1Q9NWF4 448 aa12.54□□□□□ -0.4
NFKB1-209ENST00000510638 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
NFKB1-209ENST00000510638 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-209ENST00000510638 CEP152O94986 1710 aa12.53□□□□□ -0.4
NFKB1-209ENST00000510638 NOS1P29475 1434 aa12.53□□□□□ -0.4
NFKB1-209ENST00000510638 TNRQ92752 1358 aa12.52□□□□□ -0.41
NFKB1-209ENST00000510638 ERVK-7P63135 1459 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms