RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 PHF14O94880 888 aa6.14□□□□□ -1.43
HMGB3P3-201ENST00000510526 ITGBL1O95965 494 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P3-201ENST00000510526 PCDHGA10Q9Y5H3 936 aa6.13□□□□□ -1.43
HMGB3P3-201ENST00000510526 EPAS1Q99814 870 aa6.12□□□□□ -1.43
HMGB3P3-201ENST00000510526 SOWAHBA6NEL2 793 aa6.11□□□□□ -1.43
HMGB3P3-201ENST00000510526 PROX2Q3B8N5 592 aa6.11□□□□□ -1.43
HMGB3P3-201ENST00000510526 EMILIN3Q9NT22 766 aa6.11□□□□□ -1.43
HMGB3P3-201ENST00000510526 COL9A1P20849 921 aa6.09□□□□□ -1.43
HMGB3P3-201ENST00000510526 KCNC4Q03721 635 aa6.09□□□□□ -1.43
HMGB3P3-201ENST00000510526 ZFRQ96KR1 1074 aaKnown RBP6.09□□□□□ -1.43
HMGB3P3-201ENST00000510526 KIAA1468Q9P260 1216 aa6.09□□□□□ -1.43
HMGB3P3-201ENST00000510526 BCAMP50895 628 aa6.08□□□□□ -1.44
HMGB3P3-201ENST00000510526 C6orf132Q5T0Z8 1188 aa6.08□□□□□ -1.44
HMGB3P3-201ENST00000510526 FAM98CQ17RN3 349 aaKnown RBP6.07□□□□□ -1.44
HMGB3P3-201ENST00000510526 TRIM6-TRIM34B2RNG4 842 aa6.06□□□□□ -1.44
HMGB3P3-201ENST00000510526 DCAF8L2P0C7V8 631 aa6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 CAMK2BQ13554 666 aa6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 LAPTM4AQ15012 233 aa6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 LRCH3Q96II8 777 aa6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 WBP1LQ9NX94 342 aa6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 TSR3Q9UJK0 312 aaKnown RBP6.05□□□□□ -1.44
HMGB3P3-201ENST00000510526 Q6ZNB5 142 aa6.04□□□□□ -1.44
HMGB3P3-201ENST00000510526 PACS2Q86VP3 889 aa6.04□□□□□ -1.44
HMGB3P3-201ENST00000510526 SEPT9Q9UHD8 586 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P3-201ENST00000510526 DPYSL4O14531 572 aa6.02□□□□□ -1.45
HMGB3P3-201ENST00000510526 RBM33Q96EV2 1170 aaKnown RBP6.02□□□□□ -1.45
HMGB3P3-201ENST00000510526 HPS5Q9UPZ3 1129 aa6.02□□□□□ -1.45
HMGB3P3-201ENST00000510526 CADPS2Q86UW7 1296 aa6.01□□□□□ -1.45
HMGB3P3-201ENST00000510526 PPP4CP60510 307 aa6□□□□□ -1.45
HMGB3P3-201ENST00000510526 DDX12PQ92771 950 aa6□□□□□ -1.45
HMGB3P3-201ENST00000510526 SPDYE16A6NNV3 312 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P3-201ENST00000510526 MAP3K7O43318 606 aa5.99□□□□□ -1.45
HMGB3P3-201ENST00000510526 EN1Q05925 392 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P3-201ENST00000510526 NBR1Q14596 966 aa5.98□□□□□ -1.45
HMGB3P3-201ENST00000510526 CERKQ8TCT0 537 aa5.98□□□□□ -1.45
HMGB3P3-201ENST00000510526 PDIA6Q15084 440 aa5.97□□□□□ -1.45
HMGB3P3-201ENST00000510526 TSKSQ9UJT2 592 aa5.97□□□□□ -1.45
HMGB3P3-201ENST00000510526 HDGFP51858 240 aaKnown RBP5.96□□□□□ -1.46
HMGB3P3-201ENST00000510526 NBPF26B4DH59 902 aa5.95□□□□□ -1.46
HMGB3P3-201ENST00000510526 NECTIN2Q92692 538 aa5.95□□□□□ -1.46
HMGB3P3-201ENST00000510526 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
HMGB3P3-201ENST00000510526 GFRA3O60609 400 aa5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 PRSS12P56730 875 aa5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 TJAP1Q5JTD0 557 aa5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 TRAF7Q6Q0C0 670 aa5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 SAMD7Q7Z3H4 446 aa5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 IL21Q9HBE4 155 aa5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 V9GY48 417 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P3-201ENST00000510526 NRG2O14511 850 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P3-201ENST00000510526 BBXQ8WY36 941 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P3-201ENST00000510526 TATDN2Q93075 761 aa5.92□□□□□ -1.46
HMGB3P3-201ENST00000510526 MTRQ99707 1265 aa5.92□□□□□ -1.46
HMGB3P3-201ENST00000510526 PRKD2Q9BZL6 878 aa5.92□□□□□ -1.46
HMGB3P3-201ENST00000510526 RBM27Q9P2N5 1060 aaKnown RBP5.92□□□□□ -1.46
HMGB3P3-201ENST00000510526 E2F4Q16254 413 aa5.91□□□□□ -1.46
HMGB3P3-201ENST00000510526 PNMA3Q9UL41 463 aa5.91□□□□□ -1.46
HMGB3P3-201ENST00000510526 ARIH1Q9Y4X5 557 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P3-201ENST00000510526 SMAPO00193 183 aa5.9□□□□□ -1.46
HMGB3P3-201ENST00000510526 GGCXP38435 758 aa5.9□□□□□ -1.46
HMGB3P3-201ENST00000510526 SLC4A3P48751 1232 aa5.9□□□□□ -1.46
HMGB3P3-201ENST00000510526 PPP1R18Q6NYC8 613 aa5.9□□□□□ -1.46
HMGB3P3-201ENST00000510526 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.9□□□□□ -1.46
HMGB3P3-201ENST00000510526 WDR70Q9NW82 654 aa5.9□□□□□ -1.46
HMGB3P3-201ENST00000510526 GRXCR2A6NFK2 248 aa5.89□□□□□ -1.47
HMGB3P3-201ENST00000510526 RNF40O75150 1001 aa5.88□□□□□ -1.47
HMGB3P3-201ENST00000510526 SPRYD3Q8NCJ5 442 aa5.88□□□□□ -1.47
HMGB3P3-201ENST00000510526 FAM198AQ9UFP1 575 aa5.88□□□□□ -1.47
HMGB3P3-201ENST00000510526 NUDT18Q6ZVK8 323 aa5.87□□□□□ -1.47
HMGB3P3-201ENST00000510526 SLF2Q8IX21 1173 aa5.87□□□□□ -1.47
HMGB3P3-201ENST00000510526 TMUB1Q9BVT8 246 aa5.87□□□□□ -1.47
HMGB3P3-201ENST00000510526 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P3-201ENST00000510526 PRR14Q9BWN1 585 aa5.86□□□□□ -1.47
HMGB3P3-201ENST00000510526 APLP1P51693 650 aa5.85□□□□□ -1.47
HMGB3P3-201ENST00000510526 ZNF516Q92618 1163 aa5.85□□□□□ -1.47
HMGB3P3-201ENST00000510526 PDZRN3Q9UPQ7 1066 aa5.85□□□□□ -1.47
HMGB3P3-201ENST00000510526 LCE2BO14633 110 aa5.84□□□□□ -1.47
HMGB3P3-201ENST00000510526 OSBPP22059 807 aa5.84□□□□□ -1.47
HMGB3P3-201ENST00000510526 C3orf80F5H4A9 247 aa5.83□□□□□ -1.48
HMGB3P3-201ENST00000510526 TTC13Q8NBP0 860 aa5.83□□□□□ -1.48
HMGB3P3-201ENST00000510526 PRIM1P49642 420 aaKnown RBP5.82□□□□□ -1.48
HMGB3P3-201ENST00000510526 SWT1Q5T5J6 900 aaKnown RBP5.82□□□□□ -1.48
HMGB3P3-201ENST00000510526 ZNF787Q6DD87 383 aa5.82□□□□□ -1.48
HMGB3P3-201ENST00000510526 ZPR1O75312 459 aa5.81□□□□□ -1.48
HMGB3P3-201ENST00000510526 COPS2P61201 443 aa5.81□□□□□ -1.48
HMGB3P3-201ENST00000510526 NKX2-3Q8TAU0 364 aa5.81□□□□□ -1.48
HMGB3P3-201ENST00000510526 CDHR5Q9HBB8 845 aa5.81□□□□□ -1.48
HMGB3P3-201ENST00000510526 PADI6Q6TGC4 694 aa5.8□□□□□ -1.48
HMGB3P3-201ENST00000510526 PCDHB3Q9Y5E6 796 aa5.8□□□□□ -1.48
HMGB3P3-201ENST00000510526 NPDC1Q9NQX5 325 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P3-201ENST00000510526 EYA1Q99502 592 aa5.78□□□□□ -1.48
HMGB3P3-201ENST00000510526 SLC19A1P41440 591 aa5.77□□□□□ -1.49
HMGB3P3-201ENST00000510526 DNAJB2P25686 324 aa5.76□□□□□ -1.49
HMGB3P3-201ENST00000510526 KMT5BQ4FZB7 885 aa5.76□□□□□ -1.49
HMGB3P3-201ENST00000510526 PKDCCQ504Y2 493 aa5.76□□□□□ -1.49
HMGB3P3-201ENST00000510526 PAXIP1Q6ZW49 1069 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P3-201ENST00000510526 CFAP44Q96MT7 982 aa5.76□□□□□ -1.49
HMGB3P3-201ENST00000510526 RNF223E7ERA6 249 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 DGAT1O75907 488 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms