RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 ADAM33Q9BZ11 813 aa9.41□□□□□ -0.9
CAST-229ENST00000510098 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
CAST-229ENST00000510098 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
CAST-229ENST00000510098 GRXCR2A6NFK2 248 aa9.39□□□□□ -0.91
CAST-229ENST00000510098 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
CAST-229ENST00000510098 EPAS1Q99814 870 aa9.38□□□□□ -0.91
CAST-229ENST00000510098 VPS9D1Q9Y2B5 631 aa9.38□□□□□ -0.91
CAST-229ENST00000510098 NBR1Q14596 966 aa9.37□□□□□ -0.91
CAST-229ENST00000510098 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
CAST-229ENST00000510098 PTPREP23469 700 aa9.36□□□□□ -0.91
CAST-229ENST00000510098 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
CAST-229ENST00000510098 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
CAST-229ENST00000510098 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
CAST-229ENST00000510098 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
CAST-229ENST00000510098 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
CAST-229ENST00000510098 SEMA3EO15041 775 aa9.33□□□□□ -0.92
CAST-229ENST00000510098 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
CAST-229ENST00000510098 OSBPP22059 807 aa9.32□□□□□ -0.92
CAST-229ENST00000510098 EN1Q05925 392 aaPredicted RBP9.32□□□□□ -0.92
CAST-229ENST00000510098 MAP3K7O43318 606 aa9.31□□□□□ -0.92
CAST-229ENST00000510098 COL9A1P20849 921 aa9.31□□□□□ -0.92
CAST-229ENST00000510098 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
CAST-229ENST00000510098 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
CAST-229ENST00000510098 PPP1R3GB7ZBB8 358 aa9.3□□□□□ -0.92
CAST-229ENST00000510098 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
CAST-229ENST00000510098 PROX2Q3B8N5 592 aa9.26□□□□□ -0.93
CAST-229ENST00000510098 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
CAST-229ENST00000510098 ONECUT3O60422 494 aaPredicted RBP9.24□□□□□ -0.93
CAST-229ENST00000510098 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
CAST-229ENST00000510098 STAC3Q96MF2 364 aa9.23□□□□□ -0.93
CAST-229ENST00000510098 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
CAST-229ENST00000510098 NBPF3Q9H094 633 aa9.21□□□□□ -0.94
CAST-229ENST00000510098 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
CAST-229ENST00000510098 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
CAST-229ENST00000510098 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
CAST-229ENST00000510098 RBM26Q5T8P6 1007 aaKnown RBP9.19□□□□□ -0.94
CAST-229ENST00000510098 SMYD5Q6GMV2 418 aa9.19□□□□□ -0.94
CAST-229ENST00000510098 THSD4Q6ZMP0 1018 aa9.19□□□□□ -0.94
CAST-229ENST00000510098 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
CAST-229ENST00000510098 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
CAST-229ENST00000510098 NUTM2FA1L443 756 aa9.18□□□□□ -0.94
CAST-229ENST00000510098 PRSS12P56730 875 aa9.18□□□□□ -0.94
CAST-229ENST00000510098 LAPTM4BQ86VI4 370 aa9.18□□□□□ -0.94
CAST-229ENST00000510098 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
CAST-229ENST00000510098 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
CAST-229ENST00000510098 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
CAST-229ENST00000510098 FAM198AQ9UFP1 575 aa9.16□□□□□ -0.94
CAST-229ENST00000510098 PTGDRQ13258 359 aa9.15□□□□□ -0.94
CAST-229ENST00000510098 WNT2BQ93097 391 aa9.15□□□□□ -0.94
CAST-229ENST00000510098 PACS2Q86VP3 889 aa9.14□□□□□ -0.95
CAST-229ENST00000510098 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
CAST-229ENST00000510098 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
CAST-229ENST00000510098 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
CAST-229ENST00000510098 C3orf80F5H4A9 247 aa9.12□□□□□ -0.95
CAST-229ENST00000510098 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
CAST-229ENST00000510098 TTC13Q8NBP0 860 aa9.12□□□□□ -0.95
CAST-229ENST00000510098 SMAPO00193 183 aa9.11□□□□□ -0.95
CAST-229ENST00000510098 PTPN5P54829 565 aa9.11□□□□□ -0.95
CAST-229ENST00000510098 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
CAST-229ENST00000510098 TULP1O00294 542 aaPredicted RBP9.1□□□□□ -0.95
CAST-229ENST00000510098 FCHSD2O94868 740 aa9.1□□□□□ -0.95
CAST-229ENST00000510098 SOWAHBA6NEL2 793 aa9.09□□□□□ -0.95
CAST-229ENST00000510098 TATDN2Q93075 761 aa9.09□□□□□ -0.95
CAST-229ENST00000510098 BCANQ96GW7 911 aa9.09□□□□□ -0.95
CAST-229ENST00000510098 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
CAST-229ENST00000510098 FAM98CQ17RN3 349 aaKnown RBP9.08□□□□□ -0.96
CAST-229ENST00000510098 ANKK1Q8NFD2 765 aa9.08□□□□□ -0.96
CAST-229ENST00000510098 PNMA3Q9UL41 463 aa9.08□□□□□ -0.96
CAST-229ENST00000510098 NBPF26B4DH59 902 aa9.07□□□□□ -0.96
CAST-229ENST00000510098 GPR37O15354 613 aa9.07□□□□□ -0.96
CAST-229ENST00000510098 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
CAST-229ENST00000510098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
CAST-229ENST00000510098 GPIHBP1Q8IV16 184 aa9.06□□□□□ -0.96
CAST-229ENST00000510098 HIC1Q14526 733 aa9.05□□□□□ -0.96
CAST-229ENST00000510098 GNPATO15228 680 aa9.04□□□□□ -0.96
CAST-229ENST00000510098 FECHP22830 423 aa9.04□□□□□ -0.96
CAST-229ENST00000510098 BCAMP50895 628 aa9.04□□□□□ -0.96
CAST-229ENST00000510098 FAM161AQ3B820 660 aa9.04□□□□□ -0.96
CAST-229ENST00000510098 NYAP1Q6ZVC0 841 aa9.04□□□□□ -0.96
CAST-229ENST00000510098 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
CAST-229ENST00000510098 EYA1Q99502 592 aa9.03□□□□□ -0.96
CAST-229ENST00000510098 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
CAST-229ENST00000510098 LMOD2Q6P5Q4 547 aa9.02□□□□□ -0.97
CAST-229ENST00000510098 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
CAST-229ENST00000510098 LRCH3Q96II8 777 aa9□□□□□ -0.97
CAST-229ENST00000510098 WBP1LQ9NX94 342 aa9□□□□□ -0.97
CAST-229ENST00000510098 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
CAST-229ENST00000510098 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
CAST-229ENST00000510098 TSR3Q9UJK0 312 aaKnown RBP8.99□□□□□ -0.97
CAST-229ENST00000510098 RGS20O76081 388 aa8.98□□□□□ -0.97
CAST-229ENST00000510098 A0A0G2JS52 829 aa8.97□□□□□ -0.97
CAST-229ENST00000510098 HPS5Q9UPZ3 1129 aa8.97□□□□□ -0.97
CAST-229ENST00000510098 OATP04181 439 aa8.96□□□□□ -0.98
CAST-229ENST00000510098 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.98
CAST-229ENST00000510098 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
CAST-229ENST00000510098 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
CAST-229ENST00000510098 PXYLP1Q8TE99 480 aa8.95□□□□□ -0.98
CAST-229ENST00000510098 DNAJB2P25686 324 aa8.94□□□□□ -0.98
CAST-229ENST00000510098 METTL3Q86U44 580 aaKnown RBP8.94□□□□□ -0.98
CAST-229ENST00000510098 RNF40O75150 1001 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms