RNA–Protein interactions for RNA: ENST00000509925.5

PCDH7-204, Transcript of protocadherin 7, humanhuman

TSL 3

Gene PCDH7, Length 543 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-204ENST00000509925 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
PCDH7-204ENST00000509925 ABCC1P33527 1531 aa13.76□□□□□ -0.21
PCDH7-204ENST00000509925 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
PCDH7-204ENST00000509925 MLH3Q9UHC1 1453 aa13.75□□□□□ -0.21
PCDH7-204ENST00000509925 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
PCDH7-204ENST00000509925 SUPT6HQ7KZ85 1726 aaKnown RBP13.75□□□□□ -0.21
PCDH7-204ENST00000509925 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
PCDH7-204ENST00000509925 PTPRTO14522 1441 aa13.74□□□□□ -0.21
PCDH7-204ENST00000509925 SOCS7O14512 581 aa13.74□□□□□ -0.21
PCDH7-204ENST00000509925 AGLP35573 1532 aa13.73□□□□□ -0.21
PCDH7-204ENST00000509925 GABBR2O75899 941 aa13.72□□□□□ -0.21
PCDH7-204ENST00000509925 CAMSAP1Q5T5Y3 1602 aa13.71□□□□□ -0.22
PCDH7-204ENST00000509925 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
PCDH7-204ENST00000509925 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
PCDH7-204ENST00000509925 ZNF777Q9ULD5 760 aaPredicted RBP13.7□□□□□ -0.22
PCDH7-204ENST00000509925 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
PCDH7-204ENST00000509925 SAMD9LQ8IVG5 1584 aa13.7□□□□□ -0.22
PCDH7-204ENST00000509925 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
PCDH7-204ENST00000509925 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
PCDH7-204ENST00000509925 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
PCDH7-204ENST00000509925 CCDC18Q5T9S5 1454 aa13.67□□□□□ -0.22
PCDH7-204ENST00000509925 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
PCDH7-204ENST00000509925 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
PCDH7-204ENST00000509925 LHX8Q68G74 356 aa13.66□□□□□ -0.22
PCDH7-204ENST00000509925 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
PCDH7-204ENST00000509925 HNRNPMP52272 730 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDH7-204ENST00000509925 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
PCDH7-204ENST00000509925 ZMYM3Q14202 1370 aa13.65□□□□□ -0.22
PCDH7-204ENST00000509925 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
PCDH7-204ENST00000509925 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
PCDH7-204ENST00000509925 IQSEC2Q5JU85 1478 aa13.64□□□□□ -0.23
PCDH7-204ENST00000509925 ATP7AQ04656 1500 aa13.64□□□□□ -0.23
PCDH7-204ENST00000509925 NPATQ14207 1427 aa13.64□□□□□ -0.23
PCDH7-204ENST00000509925 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
PCDH7-204ENST00000509925 UBAP1LF5GYI3 381 aa13.62□□□□□ -0.23
PCDH7-204ENST00000509925 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
PCDH7-204ENST00000509925 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
PCDH7-204ENST00000509925 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
PCDH7-204ENST00000509925 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
PCDH7-204ENST00000509925 PLXNC1O60486 1568 aa13.6□□□□□ -0.23
PCDH7-204ENST00000509925 GGT6Q6P531 493 aa13.6□□□□□ -0.23
PCDH7-204ENST00000509925 A2MP01023 1474 aa13.59□□□□□ -0.23
PCDH7-204ENST00000509925 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
PCDH7-204ENST00000509925 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
PCDH7-204ENST00000509925 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
PCDH7-204ENST00000509925 CFDP1Q9UEE9 299 aaPredicted RBP13.57□□□□□ -0.24
PCDH7-204ENST00000509925 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
PCDH7-204ENST00000509925 PLA2R1Q13018 1463 aa13.56□□□□□ -0.24
PCDH7-204ENST00000509925 PKD2Q13563 968 aa13.56□□□□□ -0.24
PCDH7-204ENST00000509925 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
PCDH7-204ENST00000509925 DNMT1P26358 1616 aaKnown RBP13.55□□□□□ -0.24
PCDH7-204ENST00000509925 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
PCDH7-204ENST00000509925 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
PCDH7-204ENST00000509925 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
PCDH7-204ENST00000509925 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
PCDH7-204ENST00000509925 PIP4K2BP78356 416 aa13.52□□□□□ -0.25
PCDH7-204ENST00000509925 TIAM1Q13009 1591 aa13.51□□□□□ -0.25
PCDH7-204ENST00000509925 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
PCDH7-204ENST00000509925 MTUS2Q5JR59 1369 aa13.51□□□□□ -0.25
PCDH7-204ENST00000509925 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
PCDH7-204ENST00000509925 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
PCDH7-204ENST00000509925 CFAP65Q6ZU64 1925 aaKnown RBP13.49□□□□□ -0.25
PCDH7-204ENST00000509925 HSPA1LP34931 641 aa13.49□□□□□ -0.25
PCDH7-204ENST00000509925 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
PCDH7-204ENST00000509925 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
PCDH7-204ENST00000509925 TNRQ92752 1358 aa13.46□□□□□ -0.25
PCDH7-204ENST00000509925 KIF3BO15066 747 aa13.46□□□□□ -0.25
PCDH7-204ENST00000509925 SHANK2Q9UPX8 1470 aa13.46□□□□□ -0.25
PCDH7-204ENST00000509925 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
PCDH7-204ENST00000509925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDH7-204ENST00000509925 CPS1P31327 1500 aa13.44□□□□□ -0.26
PCDH7-204ENST00000509925 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
PCDH7-204ENST00000509925 TOM1O60784 492 aa13.44□□□□□ -0.26
PCDH7-204ENST00000509925 STRCP1A6NGW2 1772 aa13.44□□□□□ -0.26
PCDH7-204ENST00000509925 KDM5DQ9BY66 1539 aa13.44□□□□□ -0.26
PCDH7-204ENST00000509925 PZPP20742 1482 aa13.43□□□□□ -0.26
PCDH7-204ENST00000509925 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
PCDH7-204ENST00000509925 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
PCDH7-204ENST00000509925 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
PCDH7-204ENST00000509925 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
PCDH7-204ENST00000509925 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
PCDH7-204ENST00000509925 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
PCDH7-204ENST00000509925 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
PCDH7-204ENST00000509925 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
PCDH7-204ENST00000509925 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
PCDH7-204ENST00000509925 UGGT1Q9NYU2 1555 aa13.41□□□□□ -0.26
PCDH7-204ENST00000509925 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
PCDH7-204ENST00000509925 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
PCDH7-204ENST00000509925 DEPDC5O75140 1603 aa13.39□□□□□ -0.27
PCDH7-204ENST00000509925 THEMISQ8N1K5 641 aaPredicted RBP13.39□□□□□ -0.27
PCDH7-204ENST00000509925 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
PCDH7-204ENST00000509925 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
PCDH7-204ENST00000509925 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
PCDH7-204ENST00000509925 NCOA2Q15596 1464 aa13.37□□□□□ -0.27
PCDH7-204ENST00000509925 CEP152O94986 1710 aa13.37□□□□□ -0.27
PCDH7-204ENST00000509925 FAM135AQ9P2D6 1515 aa13.37□□□□□ -0.27
PCDH7-204ENST00000509925 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
PCDH7-204ENST00000509925 MED14O60244 1454 aa13.36□□□□□ -0.27
PCDH7-204ENST00000509925 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
PCDH7-204ENST00000509925 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms