RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 SSUH2Q9Y2M2 353 aa10.53□□□□□ -0.72
CAST-228ENST00000509903 ZNF644Q9H582 1327 aaPredicted RBP10.53□□□□□ -0.72
CAST-228ENST00000509903 DENND4BO75064 1496 aaPredicted RBP10.52□□□□□ -0.72
CAST-228ENST00000509903 KDM5BQ9UGL1 1544 aa10.52□□□□□ -0.72
CAST-228ENST00000509903 ITSN2Q9NZM3 1697 aa10.52□□□□□ -0.73
CAST-228ENST00000509903 CFDP1Q9UEE9 299 aaPredicted RBP10.52□□□□□ -0.73
CAST-228ENST00000509903 CAMSAP2Q08AD1 1489 aa10.5□□□□□ -0.73
CAST-228ENST00000509903 CCER2I3L3R5 266 aa10.49□□□□□ -0.73
CAST-228ENST00000509903 ADCY10Q96PN6 1610 aa10.49□□□□□ -0.73
CAST-228ENST00000509903 ZNF777Q9ULD5 760 aaPredicted RBP10.49□□□□□ -0.73
CAST-228ENST00000509903 KIF14Q15058 1648 aa10.49□□□□□ -0.73
CAST-228ENST00000509903 GPATCH8Q9UKJ3 1502 aaKnown RBP10.48□□□□□ -0.73
CAST-228ENST00000509903 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
CAST-228ENST00000509903 NPM2Q86SE8 214 aaKnown RBP10.48□□□□□ -0.73
CAST-228ENST00000509903 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
CAST-228ENST00000509903 L3MBTL2Q969R5 705 aa10.47□□□□□ -0.73
CAST-228ENST00000509903 NUBP1P53384 320 aa10.46□□□□□ -0.73
CAST-228ENST00000509903 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAST-228ENST00000509903 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.73
CAST-228ENST00000509903 ARID3AQ99856 593 aa10.46□□□□□ -0.73
CAST-228ENST00000509903 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.73
CAST-228ENST00000509903 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.73
CAST-228ENST00000509903 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
CAST-228ENST00000509903 RPRD2Q5VT52 1461 aaKnown RBP10.46□□□□□ -0.74
CAST-228ENST00000509903 HSPA5P11021 654 aaKnown RBP10.46□□□□□ -0.74
CAST-228ENST00000509903 ABCA8O94911 1581 aa10.45□□□□□ -0.74
CAST-228ENST00000509903 NCOA1Q15788 1441 aa10.45□□□□□ -0.74
CAST-228ENST00000509903 ANKRD30AQ9BXX3 1397 aa10.44□□□□□ -0.74
CAST-228ENST00000509903 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
CAST-228ENST00000509903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
CAST-228ENST00000509903 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
CAST-228ENST00000509903 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
CAST-228ENST00000509903 ADGRL2O95490 1459 aa10.44□□□□□ -0.74
CAST-228ENST00000509903 ATP10BO94823 1461 aa10.43□□□□□ -0.74
CAST-228ENST00000509903 TEX14Q8IWB6 1497 aa10.42□□□□□ -0.74
CAST-228ENST00000509903 WASHC2AQ641Q2 1341 aa10.42□□□□□ -0.74
CAST-228ENST00000509903 PZPP20742 1482 aa10.42□□□□□ -0.74
CAST-228ENST00000509903 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
CAST-228ENST00000509903 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
CAST-228ENST00000509903 PTPRGP23470 1445 aa10.41□□□□□ -0.74
CAST-228ENST00000509903 SEMA3EO15041 775 aa10.41□□□□□ -0.74
CAST-228ENST00000509903 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
CAST-228ENST00000509903 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
CAST-228ENST00000509903 ABCC10Q5T3U5 1492 aa10.41□□□□□ -0.74
CAST-228ENST00000509903 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.74
CAST-228ENST00000509903 SHANK2Q9UPX8 1470 aa10.4□□□□□ -0.74
CAST-228ENST00000509903 KIAA1107Q9UPP5 1409 aa10.4□□□□□ -0.75
CAST-228ENST00000509903 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
CAST-228ENST00000509903 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 TSPY4P0CV99 314 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 TSPY10P0CW01 314 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 NBPF8Q3BBV2 869 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
CAST-228ENST00000509903 VGFO15240 615 aaPredicted RBP10.38□□□□□ -0.75
CAST-228ENST00000509903 CNTLNQ9NXG0 1405 aa10.38□□□□□ -0.75
CAST-228ENST00000509903 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
CAST-228ENST00000509903 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
CAST-228ENST00000509903 CHD1O14646 1710 aa10.36□□□□□ -0.75
CAST-228ENST00000509903 NEFLP07196 543 aa10.36□□□□□ -0.75
CAST-228ENST00000509903 ZMYND15Q9H091 742 aa10.36□□□□□ -0.75
CAST-228ENST00000509903 NUP155O75694 1391 aa10.36□□□□□ -0.75
CAST-228ENST00000509903 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
CAST-228ENST00000509903 KIF15Q9NS87 1388 aa10.34□□□□□ -0.75
CAST-228ENST00000509903 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAST-228ENST00000509903 ZNF326Q5BKZ1 582 aaKnown RBP10.34□□□□□ -0.75
CAST-228ENST00000509903 ARHGEF5Q12774 1597 aa10.34□□□□□ -0.75
CAST-228ENST00000509903 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
CAST-228ENST00000509903 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
CAST-228ENST00000509903 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAST-228ENST00000509903 IL27Q8NEV9 243 aa10.33□□□□□ -0.76
CAST-228ENST00000509903 CCDC141Q6ZP82 1450 aa10.33□□□□□ -0.76
CAST-228ENST00000509903 MBD5Q9P267 1494 aa10.33□□□□□ -0.76
CAST-228ENST00000509903 PREX2Q70Z35 1606 aa10.33□□□□□ -0.76
CAST-228ENST00000509903 KIF7Q2M1P5 1343 aa10.32□□□□□ -0.76
CAST-228ENST00000509903 KDM5DQ9BY66 1539 aa10.32□□□□□ -0.76
CAST-228ENST00000509903 POLR1AO95602 1720 aaPredicted RBP10.31□□□□□ -0.76
CAST-228ENST00000509903 SAMD9LQ8IVG5 1584 aa10.31□□□□□ -0.76
CAST-228ENST00000509903 RSPH4AQ5TD94 716 aa10.31□□□□□ -0.76
CAST-228ENST00000509903 CDC42BPBQ9Y5S2 1711 aa10.31□□□□□ -0.76
CAST-228ENST00000509903 SHROOM2Q13796 1616 aa10.31□□□□□ -0.76
CAST-228ENST00000509903 USP47Q96K76 1375 aa10.3□□□□□ -0.76
CAST-228ENST00000509903 ZMYND10O75800 440 aa10.3□□□□□ -0.76
CAST-228ENST00000509903 PRKRIP1Q9H875 184 aaPredicted RBP10.3□□□□□ -0.76
CAST-228ENST00000509903 ARHGAP5Q13017 1502 aa10.3□□□□□ -0.76
CAST-228ENST00000509903 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 SYCP2Q9BX26 1530 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 PYGBP11216 843 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 TTC37Q6PGP7 1564 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
CAST-228ENST00000509903 TESPA1A2RU30 521 aaPredicted RBP10.27□□□□□ -0.77
CAST-228ENST00000509903 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.77
CAST-228ENST00000509903 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
CAST-228ENST00000509903 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.77
CAST-228ENST00000509903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.27□□□□□ -0.77
CAST-228ENST00000509903 RALGAPBQ86X10 1494 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms