RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 GPIHBP1Q8IV16 184 aa15.93■□□□□ 0.14
TRAPPC11-206ENST00000509857 GPR37O15354 613 aa15.92■□□□□ 0.14
TRAPPC11-206ENST00000509857 PTPREP23469 700 aa15.92■□□□□ 0.14
TRAPPC11-206ENST00000509857 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
TRAPPC11-206ENST00000509857 CDHR5Q9HBB8 845 aa15.92■□□□□ 0.14
TRAPPC11-206ENST00000509857 NUTM2FA1L443 756 aa15.91■□□□□ 0.14
TRAPPC11-206ENST00000509857 POTEGQ6S5H5 508 aa15.91■□□□□ 0.14
TRAPPC11-206ENST00000509857 POTEMA6NI47 508 aa15.89■□□□□ 0.13
TRAPPC11-206ENST00000509857 NPDC1Q9NQX5 325 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC11-206ENST00000509857 PPP1R3GB7ZBB8 358 aa15.88■□□□□ 0.13
TRAPPC11-206ENST00000509857 ARHGAP33O14559 1287 aa15.88■□□□□ 0.13
TRAPPC11-206ENST00000509857 PTGDRQ13258 359 aa15.88■□□□□ 0.13
TRAPPC11-206ENST00000509857 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
TRAPPC11-206ENST00000509857 KCNK17Q96T54 332 aa15.88■□□□□ 0.13
TRAPPC11-206ENST00000509857 FCHSD2O94868 740 aa15.86■□□□□ 0.13
TRAPPC11-206ENST00000509857 COL9A1P20849 921 aa15.86■□□□□ 0.13
TRAPPC11-206ENST00000509857 ZC3H15Q8WU90 426 aaKnown RBP15.85■□□□□ 0.13
TRAPPC11-206ENST00000509857 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
TRAPPC11-206ENST00000509857 HIC1Q14526 733 aa15.83■□□□□ 0.12
TRAPPC11-206ENST00000509857 PSEN2P49810 448 aa15.82■□□□□ 0.12
TRAPPC11-206ENST00000509857 AXIN2Q9Y2T1 843 aa15.82■□□□□ 0.12
TRAPPC11-206ENST00000509857 RBM27Q9P2N5 1060 aaKnown RBP15.81■□□□□ 0.12
TRAPPC11-206ENST00000509857 SLC4A5Q9BY07 1137 aa15.79■□□□□ 0.12
TRAPPC11-206ENST00000509857 GNPATO15228 680 aa15.78■□□□□ 0.12
TRAPPC11-206ENST00000509857 ZMYND10O75800 440 aa15.78■□□□□ 0.12
TRAPPC11-206ENST00000509857 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
TRAPPC11-206ENST00000509857 PRSS12P56730 875 aa15.77■□□□□ 0.12
TRAPPC11-206ENST00000509857 DMRTA1Q5VZB9 504 aa15.77■□□□□ 0.12
TRAPPC11-206ENST00000509857 TTC13Q8NBP0 860 aa15.76■□□□□ 0.11
TRAPPC11-206ENST00000509857 KRTAP3-3Q9BYR6 98 aa15.75■□□□□ 0.11
TRAPPC11-206ENST00000509857 KRTAP3-2Q9BYR7 98 aa15.75■□□□□ 0.11
TRAPPC11-206ENST00000509857 LSM11P83369 360 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRAPPC11-206ENST00000509857 BARGINQ6ZT62 677 aa15.74■□□□□ 0.11
TRAPPC11-206ENST00000509857 CDCA7LQ96GN5 454 aa15.74■□□□□ 0.11
TRAPPC11-206ENST00000509857 ONECUT3O60422 494 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC11-206ENST00000509857 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
TRAPPC11-206ENST00000509857 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
TRAPPC11-206ENST00000509857 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
TRAPPC11-206ENST00000509857 TK2O00142 265 aa15.71■□□□□ 0.11
TRAPPC11-206ENST00000509857 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
TRAPPC11-206ENST00000509857 PROX2Q3B8N5 592 aa15.7■□□□□ 0.1
TRAPPC11-206ENST00000509857 FECHP22830 423 aa15.69■□□□□ 0.1
TRAPPC11-206ENST00000509857 FAM198AQ9UFP1 575 aa15.69■□□□□ 0.1
TRAPPC11-206ENST00000509857 VPS9D1Q9Y2B5 631 aa15.69■□□□□ 0.1
TRAPPC11-206ENST00000509857 MAP2K5Q13163 448 aa15.68■□□□□ 0.1
TRAPPC11-206ENST00000509857 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
TRAPPC11-206ENST00000509857 PCDH10Q9P2E7 1040 aa15.65■□□□□ 0.1
TRAPPC11-206ENST00000509857 ADGRD1Q6QNK2 874 aa15.64■□□□□ 0.09
TRAPPC11-206ENST00000509857 RABGEF1Q9UJ41 708 aa15.64■□□□□ 0.09
TRAPPC11-206ENST00000509857 MINK1Q8N4C8 1332 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC11-206ENST00000509857 PACS2Q86VP3 889 aa15.62■□□□□ 0.09
TRAPPC11-206ENST00000509857 ADGRG1Q9Y653 693 aa15.62■□□□□ 0.09
TRAPPC11-206ENST00000509857 KIAA1468Q9P260 1216 aa15.61■□□□□ 0.09
TRAPPC11-206ENST00000509857 IRF6O14896 467 aa15.6■□□□□ 0.09
TRAPPC11-206ENST00000509857 ANKRD13DQ6ZTN6 518 aa15.6■□□□□ 0.09
TRAPPC11-206ENST00000509857 NBPF26B4DH59 902 aa15.59■□□□□ 0.09
TRAPPC11-206ENST00000509857 HRO43593 1189 aa15.59■□□□□ 0.09
TRAPPC11-206ENST00000509857 PRKCSHP14314 528 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC11-206ENST00000509857 BHMG1C9JSJ3 638 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC11-206ENST00000509857 C3orf80F5H4A9 247 aa15.57■□□□□ 0.08
TRAPPC11-206ENST00000509857 KRI1Q8N9T8 703 aaKnown RBP15.57■□□□□ 0.08
TRAPPC11-206ENST00000509857 TATDN2Q93075 761 aa15.56■□□□□ 0.08
TRAPPC11-206ENST00000509857 CCDC102AQ96A19 550 aa15.56■□□□□ 0.08
TRAPPC11-206ENST00000509857 OATP04181 439 aa15.55■□□□□ 0.08
TRAPPC11-206ENST00000509857 EYA1Q99502 592 aa15.54■□□□□ 0.08
TRAPPC11-206ENST00000509857 NBPF3Q9H094 633 aa15.54■□□□□ 0.08
TRAPPC11-206ENST00000509857 SLC24A3Q9HC58 644 aa15.54■□□□□ 0.08
TRAPPC11-206ENST00000509857 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
TRAPPC11-206ENST00000509857 NUDT18Q6ZVK8 323 aa15.53■□□□□ 0.08
TRAPPC11-206ENST00000509857 METTL3Q86U44 580 aaKnown RBP15.53■□□□□ 0.08
TRAPPC11-206ENST00000509857 PNMA3Q9UL41 463 aa15.53■□□□□ 0.08
TRAPPC11-206ENST00000509857 LAPTM4BQ86VI4 370 aa15.52■□□□□ 0.08
TRAPPC11-206ENST00000509857 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
TRAPPC11-206ENST00000509857 PXYLP1Q8TE99 480 aa15.52■□□□□ 0.08
TRAPPC11-206ENST00000509857 AK7Q96M32 723 aa15.52■□□□□ 0.08
TRAPPC11-206ENST00000509857 SMAPO00193 183 aa15.48■□□□□ 0.07
TRAPPC11-206ENST00000509857 SEPT9Q9UHD8 586 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC11-206ENST00000509857 FAM98CQ17RN3 349 aaKnown RBP15.47■□□□□ 0.07
TRAPPC11-206ENST00000509857 PHOX2BQ99453 314 aa15.46■□□□□ 0.07
TRAPPC11-206ENST00000509857 MRPL50Q8N5N7 158 aaKnown RBP15.45■□□□□ 0.06
TRAPPC11-206ENST00000509857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
TRAPPC11-206ENST00000509857 TRIM66O15016 1216 aa15.44■□□□□ 0.06
TRAPPC11-206ENST00000509857 AMHR2Q16671 573 aa15.43■□□□□ 0.06
TRAPPC11-206ENST00000509857 RCCD1A6NED2 376 aa15.42■□□□□ 0.06
TRAPPC11-206ENST00000509857 DNAJB2P25686 324 aa15.42■□□□□ 0.06
TRAPPC11-206ENST00000509857 TMEM134Q9H6X4 195 aa15.4■□□□□ 0.06
TRAPPC11-206ENST00000509857 STAC3Q96MF2 364 aa15.39■□□□□ 0.05
TRAPPC11-206ENST00000509857 ZFRQ96KR1 1074 aaKnown RBP15.38■□□□□ 0.05
TRAPPC11-206ENST00000509857 TMUB1Q9BVT8 246 aa15.36■□□□□ 0.05
TRAPPC11-206ENST00000509857 PDE4DQ08499 809 aa15.34■□□□□ 0.05
TRAPPC11-206ENST00000509857 SPNS2Q8IVW8 549 aa15.34■□□□□ 0.05
TRAPPC11-206ENST00000509857 NLRP7Q8WX94 980 aa15.34■□□□□ 0.05
TRAPPC11-206ENST00000509857 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
TRAPPC11-206ENST00000509857 CLCN1P35523 988 aa15.32■□□□□ 0.04
TRAPPC11-206ENST00000509857 MDM2Q00987 491 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC11-206ENST00000509857 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC11-206ENST00000509857 SWT1Q5T5J6 900 aaKnown RBP15.31■□□□□ 0.04
TRAPPC11-206ENST00000509857 SAMD7Q7Z3H4 446 aa15.31■□□□□ 0.04
TRAPPC11-206ENST00000509857 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
TRAPPC11-206ENST00000509857 PARP9Q8IXQ6 854 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms